基于GIS与多目标区位配置模型的沈阳市公园选址

结合地理信息系统(GIS)与多目标区位配置模型(LA),综合考虑4个相对独立的目标因子(人口密度等级、空气污染等级、城市热岛效应等级、土地利用格局)对沈阳市三环内城市公园进行优化选址,并将优化结果与公园现状空间分布进行比较,以评价城市公园空间布局的合理性.结果表明： 与其他因子相比,空气污染因子对研究区城市绿地的选址具有重要影响.与单目标因子相比,多目标综合加权分析的结果能够合理地为城市绿地提供优化的空间选址.GIS与LA相结合的方法为城市绿地的空间优化提供了新思路.     

中国仓鼠卵巢细胞表观遗传调控研究进展

中国仓鼠卵巢(Chinese hamster ovary, CHO)细胞因其具有可悬浮培养及进行蛋白质糖基化等翻译后修饰等优势,在生物制药重组蛋白生产方面具有不可替代的重要作用。但转基因沉默、表观遗传修饰等影响基因表达调控,造成CHO细胞表达稳定性降低而导致重组蛋白产量下降。本文对CHO细胞中表观遗传修饰包括DNA甲基化、组蛋白修饰和miRNA的作用研究,以及对基因表达调控的影响进行了综述。     

Mithramycin A Alleviates Cognitive Deficits and Reduces Neuropathology in a Transgenic Mouse Model of Alzheimer’s Disease

Increasing evidence has shown that specificity protein 1 (Sp1) is abnormally increased in the brains of subjects with Alzheimer’s disease (AD) and transgenic AD models. However, whether the Sp1 activation plays a critical role in the AD pathogenesis and selective inhibition of Sp1 activation may have a disease-modifying effect on the AD-like phenotypes remain elusive. In this study, we reported that Sp1 mRNA and protein expression were markedly increased in the brain of APPswe/PS1dE9 transgenic mice, whereas chronic administration of mithramycin A (MTM), a selective Sp1 inhibitor, potently inhibited Sp1 activation in the APPswe/PS1dE9 mice down to the levels of wild-type mice. Specifically, we found that MTM treatment resulted in a significant improvement of learning and memory deficits, a dramatic reduction in cerebral Aβ levels and plaque burden, a profound reduction in tau hyperphosphorylation, and a marked increase in synaptic marker in the APPswe/PS1dE9 mice. In addition, MTM treatment was powerfully effective in inhibiting amyloid precursor protein (APP) processing via suppressing APP, beta-site APP cleaving enzyme 1 (BACE1), and presenilin-1 (PS1) mRNA and protein expression to preclude Aβ production in the APPswe/PS1dE9 mice. Furthermore, MTM treatment strongly inhibited phosphorylated CDK5 and GSK3β signal pathways to reduce tau hyperphosphorylation in the APPswe/PS1dE9 mice. Collectively, our findings provide evidence that Sp1 activation may contribute to the AD pathogenesis and may serve as a novel therapeutic target in the treatment of AD. The present study highlights that selective Sp1 inhibitors may be considered as disease-modifying therapeutic agents for AD.     

铜绿假单胞菌在液滴界面的二维和三维运动特征

【目的】环境中无处不在的气-液界面能够影响细菌的运动和养分的传输扩散,进而调控微生物的种群互作和群落结构。因此,系统地认知微生物在微观界面的运动特征对于理解和解析微生物多样性的产生、维持机制以及生态功能至关重要。【方法】本文基于微流体显微系统(超高速荧光显微镜和数字全息显微镜),以具备主动运动能力的模式菌株铜绿假单胞菌(Pseudomonas aeruginosaPAO1)为研究对象,观测并解析了细菌细胞在气-液界面的二维运动特征和气-液-固界面的二维与三维运动特征。【结果】PAO1既能在气-液界面处执行近似直线轨迹的运动,也能在气-液界面下方执行顺时针或逆时针旋转的圆周运动(最小曲率半径Rmin=3μm)。在气-液-固界面处,6.45%的不运动细胞聚集于气-液-固界面边缘处,并在该处完成不可逆附着;同时,游动细胞由于受到液滴内部毛细管流和马兰戈尼(Marangoni)涡流运动的综合作用,直线游动至距界面约40μm内的区域后,其运动轨迹转变为垂直界面方向返回或以近似界面平行方向运动并附着,这些行为显著调节了PAO1的空间分布,促使了其朝向气-液-固界面的迁移,表明个体PAO1的鞭毛在此...     

嗜热四膜虫可变剪接基因鉴定及功能分析

可变剪接是产生蛋白质组多样性和调节基因表达的重要机制,相关研究在高等真核生物中开展较多,而在单细胞真核生物中则较少,尤其是单细胞原生动物纤毛虫中,仅有少量报道。本文基于单细胞模式原生动物嗜热四膜虫种大量转录组数据,对其可变剪接基因进行了鉴定及分析。在嗜热四膜虫中共鉴定到2 894个可变剪接位点,涉及到2 698个可变剪接基因,可分为四类。考虑到转录本拼接的准确性,选择了其中464个与基因组预测模型完全一致的可变剪接基因进行深入分析,其中生长(growth)时期、饥饿(starvation)时期、接合生殖(conjugation)时期特异性的可变剪接基因分别为49个、79个和135个。对可变剪接基因的功能进行分析表明其涉及的功能广泛且显著富集于蛋白激酶过程,提示可变剪接基因在嗜热四膜虫蛋白磷酸化和信号传导中具有重要作用。     

Proteomic analysis of the silkworm (Bombyx mori L.) hemolymph during developmental stage

We utilized the proteomic approach to investigate the proteome of the fifth instar hemolymph during growth and development, and to improve the understanding of this important bioprocess and gene expression situation. A total of 25 microL of hemolymph was used for 2D analysis, and the separated proteins were visualized by silver staining and analyzed using the ImageMaster 2D software. The report showed as many as 241 of protein spots were expressed in the beginning of the fifth instar. Among them, most were concentrated in pI 3.5-6.5, which reached 76% of the total protein spots. As for the protein molecular sizes, 182 protein spots concentrated between 35 and 90 kDa, which comes to 75% of the total spots. When the larvae grow to the seventh day (total fifth instar duration was 9 days), 298 protein spots were visualized through 2D electrophoresis. Fifty-seven spots were newly expressed compared to the image of the first day in fifth instar. The results implied that these proteins are related to biosynthesis of silk protein and metamorphosis preparation from larva to pupa. In total, 19 protein spots including 6 special spots expressed in seventh day were analyzed through MALDI-TOF-MS. The relations between proteins and growth and development of silkworm were discussed.     

Lipopolysaccharide induces autophagy through BIRC2 in human umbilical vein endothelial cells

Lipopolysaccharide (LPS), as an important proinflammatory agent, targets the endothelium. However, almost all in vitro experiments of the effect of LPS on vascular endothelial cells (VECs) were performed under an artificially decreased concentration of serum that was not enough to maintain the cell growth for a long time. The mechanism underlying LPS action on VECs cultured in a nutrient‐rich condition is not clear. To address this question and mimic the in vivo condition, we investigated the effect of LPS on VEC autophagy, which is involved in numerous physiological processes. The effect of LPS on microtubule‐associated protein 1 light chain 3 (LC3) distribution, LC3‐II accumulation and p62 degradation showed that LPS effectively induced autophagy in VECs cultured in the presence of 20% serum. To understand the mechanism by which LPS triggers the cell autophagy, we first investigated the effects of LPS on the expression of BIRC2 (cIAP1), a well‐known apoptosis inhibitor, and on the kinase activity of mammalian target of rapamycin (mTOR) and nuclear translocation of p53. LPS increased BIRC2 expression in a dose‐ and time‐dependent manner and elevated the intranuclear level of p53 but had no effect on the mTOR pathway when it triggered VEC autophagy. Furthermore, knockdown of BIRC2 by RNA interference inhibited the autophagy and the translocation of p53 to nuclei induced by LPS. These data suggest a novel role for BIRC2 in LPS‐induced autophagy in VECs. J. Cell. Physiol. 225: 174–179, 2010. © 2010 Wiley‐Liss, Inc.     

温泉蛇属Thermophis一新种——四川温泉蛇

From 2004 to 2006, several field trips in western Sichuan, China were carried out. A number of Thermophis snakes were collected in Litang County. After detailed morphological studies, we found that these Thermophis specimens were much different from those from Xizang (Tibet). We believed that Litang snakes should be a new species and describe it as below.     

Proteomic analysis of silk gland programmed cell death during metamorphosis of the silkworm Bombyx mori

The silk gland of the silkworm Bombyx mori undergoes programmed cell death (PCD) during pupal metamorphosis. On the basis of their morphological changes and the occurrence of a DNA ladder, the tissue cells were categorized into three groups: intact, committed, and dying. To identify the proteins involved in this process, we conducted a comparative proteomic analysis. Protein expression changes among the three different cell types were examined by two-dimensional gel electrophoresis. Among approximately 1000 reproducibly detected protein spots on each gel, 43 were down-regulated and 34 were up-regulated in PCD process. Mass spectrometry identified 17 differentially expressed proteins, including some well-studied proteins as well as some novel PCD related proteins, such as caspases, proteasome subunit, elongation factor, heat shock protein, and hypothetical proteins. Our results suggest that these proteins may participate in the silk gland PCD process of B. mori and, thus, provide new insights for this mechanism.     

实验性铬酸钠中毒大鼠肝Ⅳ型胶原变化的研究

用抗Ⅳ型胶原单克隆抗体免疫组化法、病理组织学及图象分析对实验性铬酸钠中毒大鼠肝进行了研究。一次气管内注入0.04 mg/kg Na_2CrO_42天后肝组织即出现病理改变和Ⅳ型胶原免疫组化阳性产物增加。一次注入0.98 mg/kg Na_2CrO_4后第2～28天Ⅳ型胶原免疫组化阳性产物均较对照组增加。增加的程度与肝病变程度一致,且随着肝组织的修复而下降。结果说明铬染毒所致的Ⅳ型胶原的改变与肝的病理改变密切相关。