Allopatric divergence and hybridization within Cupressus chengiana (Cupressaceae), a threatened conifer in the northern Hengduan Mountains of western China

Having a comprehensive understanding of population structure, genetic differentiation and demographic history is important for the conservation and management of threatened species. High‐throughput sequencing (HTS) provides exciting opportunities to address a wide range of factors for conservation genetics. Here, we generated HTS data and identified 266,884 high‐quality single nucleotide polymorphisms from 82 individuals of Cupressus chengiana, to assess population genomics across the species' full range, comprising the Daduhe River (DDH), Minjiang River (MJR) and Bailongjiang River (BLJ) catchments in western China. admixture , principal components analysis and phylogenetic analyses indicated that each region contains a distinct lineage, with high levels of differentiation between them (DDH, MJR and BLJ lineages). MJR was newly distinguished compared to previous surveys, and evidence including coalescent simulations supported a hybrid origin of MJR during the Quaternary. Each of these three lineages should be recognized as an evolutionarily significant unit (ESU), due to isolation, differing genetic adaptations and different demographic history. Currently, each ESU faces distinct threats, and will require different conservation strategies. Our work shows that population genomic approaches using HTS can reconstruct the complex evolutionary history of threatened species in mountainous regions, and hence inform conservation efforts, and contribute to the understanding of high biodiversity in mountains.     

Komagataeibacter rhaeticus 3-15全基因组及葡萄糖脱氢酶基因缺失体的构建

细菌纤维素(BC)是一种新型的可再生、可降解的生物高分子材料。为了最大程度的发挥BC生产菌株K.rhaeticus 315的生产能力,本文首先对K.rhaeticus 315进行全基因组测序,通过功能基因的注释、分析碳源代谢流向。结果显示,该菌株碳代谢特征之一是缺乏磷酸果糖激酶的编码基因,不能通过EMP途径代谢糖类碳源,而是主要通过PPP途径和TCA途径代谢碳源,维持菌体生长和BC合成。由于葡萄糖脱氢酶的存在,该菌株在合成BC的同时生成大量副产物—葡萄糖酸。为此,本文通过敲除葡萄糖酸合成酶相关基因,即葡萄糖脱氢酶基因gcd,构建葡萄糖脱氢酶基因缺失重组株(gcd^-),将葡萄糖酸的生成量降低了77%。     

解磷菌对设施土壤金属元素有效含量及黄瓜秧苗金属元素吸收量的影响

通过向设施土壤中添加解磷菌和秸秆,达到活化土壤中作物所需金属元素的含量,促进作物对中微量元素吸收的目的。试验设置对照、秸秆、解磷菌、解磷菌+秸秆4个处理,在不同时间测试土壤及秧苗中钙、镁、铜、铁、锌等的含量,确定解磷菌及秸秆对设施土壤金属元素含量及黄瓜秧苗吸收量的影响。试验结果表明,秸秆、解磷菌、秸秆+解磷菌处理能明显增加黄瓜秧苗吸收钙、镁、铁、铜的能力,对锌的吸收没有影响,其中秸秆+解磷菌处理对黄瓜秧苗吸收钙、镁、铜影响最大,促进作用分别达到6.26%、8.25%和11.57%,3种处理对设施土壤中有效钙、镁、铁的含量没有影响,但是能明显提高土壤中有效铜、锌的含量,盛果后期有效铜含量分别比对照提高12.19%、15.41%、16.49%,盛果后期有效锌含量分别比对照区提高38.8%、33.26%、56.81%。     

Preclinical Assessment of the Analgesic Pharmacology of NKTR-181 in Rodents

Cellular and Molecular Neurobiology - Pharmacological evaluation of the mu-opioid receptor (MOR) agonist properties of NKTR-181 in rodent models. Graded noxious stimulus intensities were used in...     

中国东北地区人乳头瘤病毒16型全基因组克隆及HPV16.HaCaT重组细胞模型的构建及初步鉴定

为构建含东北地区人乳头瘤病毒16型(HPV16)全基因组的HPV16.HaCaT细胞模型,收集中国东北地区HPV16单一感染患者宫颈脱落细胞,提取DNA,将HPV16全基因组分成4个区段,通过4对特异性引物对HPV16全基因组进行分段扩增,测序后进行序列拼接及核酸序列分析,克隆HPV16全基因组序列;通过细胞转染,构建含HPV16全基因组的HPV16.HaCaT重组细胞模型;利用聚合酶链式反应(PCR)和细胞免疫荧光法检测重组细胞内HPV16早期基因的表达.成功克隆出中国东北地区HPV16全基因组序列(GenBank登录号:MW320358);构建了东北地区HPV16全基因组的重组质粒及HPV16.HaCaT重组细胞模型;证明了 HPV16早期基因E1-E4、E5、E6和E7在重组细胞模型内均有表达,从而获得中国东北地区HPV16全基因组序列及含有HPV16全基因组的HPV16.HaCaT重组细胞模型.     

北盘江大峡谷流域浮游生物资源调查及多样性分析

为探究北盘江大峡谷流域内浮游生物群落组成及多样性情况,于2017年10月对该流域进行浮游生物调查及多样性分析.结果表明该流域内浮游植物共有7门40属61种、其中绿藻门、硅藻门和蓝藻门种类分别为21种、19种和12种,分别占到34.43％、31.15％和19.67％,浮游植物平均密度为4 298.33(375～9 500)ind./L,Shannon-Wiener藻类生物多样性指数均处于1和2之间;浮游动物3门12属21种,其中轮虫类、枝角类和桡足类种类分别为11种、5种和5种,各占到52.38％、23.81％和23.81％,浮游动物平均密度为436.11(55～1 437.5)ind./L,Shannon-Wiener生物多样性指数均处于1和2之间.本研究结果该地区水生生物资源积累了本底资料.     

Genomes of 12 fig wasps provide insights into the adaptation of pollinators to fig syconia

Figs and fig pollinators are one of the few classic textbook examples of obligate pollination mutualism. The specific dependence of fig pollinators on the relatively safe living environment with sufficient food sources in the enclosed fig syconia implies that they are vulnerable to habitat changes. However, there is still no extensive genomic evidence to reveal the evolutionary footprint of this long-term mutually beneficial symbiosis in fig pollinators. In fig syconia, there are also non-pollinator species. The non-pollinator species differ in their evolutionary and life histories from pollinators. We conducted comparative analyses on 11 newly sequenced fig wasp genomes and one previously published genome. The pollinators colonized the figs approximately 66.9 million years ago, consistent with the origin of host figs. Compared with nonpollinators, many more genes in pollinators were subject to relaxed selection. Seven genes were absent in pollinators in response to environmental stress and immune activation. Pollinators had more streamlined gene repertoires in the innate immune system, chemosensory toolbox, and detoxification system. Our results provide genomic evidence for the differentiation between pollinators and nonpollinators. The data suggest that owing to the long-term adaptation to the fig, some genes related to functions no longer required are absent in pollinators.