Distinct functional roles for hopanoid composition in the chemical tolerance of Zymomonas mobilis

Hopanoids are a class of membrane lipids found in diverse bacterial lineages, but their physiological roles are not well understood. The ethanol fermenter Zymomonas mobilis features the highest measured concentration of hopanoids, leading to the hypothesis that these lipids can protect against the solvent toxicity. However, the lack of genetic tools for manipulating hopanoid composition in this bacterium has limited their further functional analysis. Due to the polyploidy (>50 genome copies per cell) of Z. mobilis, we found that disruptions of essential hopanoid biosynthesis (hpn) genes act as genetic knockdowns, reliably modulating the abundance of different hopanoid species. Using a set of hpn transposon mutants, we demonstrate that both reduced hopanoid content and modified hopanoid polar head group composition mediate growth and survival in ethanol. In contrast, the amount of hopanoids, but not their head group composition, contributes to fitness at low pH. Spectroscopic analysis of bacterial‐derived liposomes showed that hopanoids protect against several ethanol‐driven phase transitions in membrane structure, including lipid interdigitation and bilayer dissolution. We propose that hopanoids act through a combination of hydrophobic and inter‐lipid hydrogen bonding interactions to stabilize bacterial membranes during solvent stress.     

Pathway to domestic natural rubber production: a cradle-to-grave life cycle assessment of the first guayule automobile tire manufactured in the United States

The International Journal of Life Cycle Assessment - Guayule (Parthenium argentatum) is a perennial shrub that can be cultivated in the Southwestern US. It produces natural rubber that could be a...     

Using machine learning to characterize heart failure across the scales

Biomechanics and Modeling in Mechanobiology - Heart failure is a progressive chronic condition in which the heart undergoes detrimental changes in structure and function across multiple scales in...     

Newly dominant benthic invertebrates reshape competitive networks on contemporary Caribbean reefs

Competition is a fundamental process structuring ecological communities. On coral reefs, space is a highly contested resource and the outcomes of spatial competition can dictate community composition. In the Caribbean, reefs are increasingly dominated by non-scleractinian species like sponges, gorgonians, and zoanthids, yet there is a paucity of data on interactions between these increasingly common organisms and historically dominant corals. Here, we investigated interactions among these groups of sessile benthic invertebrates to better understand the role of spatial competition in shaping benthic communities on Caribbean reefs. We coupled surveys of competitive interactions on the reef with a common garden competition experiment to determine the frequency and outcome of interference competition among eight focal species. We found that competitive interactions were pervasive on Florida reefs, with 60% of sessile benthic invertebrates interacting with at least one other invertebrate. Increasingly common non-scleractinian species were some of the most abundant taxa and consistently outcompeted the contemporarily common scleractinian species Porites porites and Siderastrea siderea. The encrusting gorgonian, Erythropodium caribaeorum, was the most aggressive species, reducing the live area of its competitors on average 42% ± 7.04 (SE) over the course of 5 months. Surprisingly, the most aggressive species declined in size when competing, while some less aggressive species were able to increase or maintain area, suggesting a trade-off between aggressiveness and growth. Our findings suggest that competition among sessile invertebrates is likely to remain an important process in structuring coral reefs, but that the optimal strategies for maintaining space on the benthos may change. Importantly, many non-scleractinian species that now dominate reefs appear to be superior competitors, potentially increasing the stress on corals on contemporary reefs.

     

Effects of Modifiers on the Growth,Photosynthesis, and Antioxidant Enzymes of Cotton Under Cadmium Toxicity

Journal of Plant Growth Regulation - The effects of four liquid modifiers (organic–inorganic composite modifier, inorganic polymer compound modifier, polyacrylate compound modifier, and...     

Soil carbonate drives local adaptation in Arabidopsis thaliana

High soil carbonate limits crop performance especially in semiarid or arid climates. To understand how plants adapt to such soils, we explored natural variation in tolerance to soil carbonate in small local populations (demes) of Arabidopsis thaliana growing on soils differing in carbonate content. Reciprocal field‐based transplants on soils with elevated carbonate (+C) and without carbonate (?C) over several years revealed that demes native to (+C) soils showed higher fitness than those native to (?C) soils when both were grown together on carbonate‐rich soil. This supports the role of soil carbonate as a driving factor for local adaptation. Analyses of contrasting demes revealed key mechanisms associated with these fitness differences. Under controlled conditions, plants from the tolerant deme A1_(+C) native to (+C) soil were more resistant to both elevated carbonate and iron deficiency than plants from the sensitive T6_(?C) deme native to (?C) soil. Resistance of A1_(+C) to elevated carbonate was associated with higher root extrusion of both protons and coumarin‐type phenolics. Tolerant A1_(+C) also had better Ca‐exclusion than sensitive T6_(?C). We conclude that Arabidopsis demes are locally adapted in their native habitat to soils with moderately elevated carbonate. This adaptation is associated with both enhanced iron acquisition and calcium exclusion.