北方农牧交错带温性盐碱化草地土壤呼吸对不同形态氮添加和刈割的响应

农牧交错带草地生态系统兼受农业和牧业的影响, 属于脆弱生态系统, 尤其是养分贫瘠的盐碱化草地, 其生态系统结构和功能对外界干扰的响应更加强烈。位于晋西北地区的农牧交错带盐碱化草地, 地理位置独特, 区别于天然牧区草地生态系统。由于毗邻农田, 农业氮肥的过量使用促进了活性氮气体排放, 同时使得农牧交错带草地土壤碳氮循环发生改变。刈割是北方农牧交错草地生态系统的主要管理方式, 为了深入探究氮添加和刈割管理方式对农牧交错带草地碳循环的影响, 进一步厘清该区域草地生态系统的碳动态问题, 该研究设置了一个不同形态氮添加和刈割的裂区实验, 测定土壤呼吸对不同形态氮肥添加和刈割的响应, 为进一步科学管理该区域草地提供可靠的依据。实验样地位于山西省右玉县境内的“山西农业大学农牧交错带草地生态系统野外观测研究站”, 于2017年设置不同形态氮添加和刈割处理, 实验处理包括对照(不刈割和刈割)、尿素添加、缓释尿素添加、刈割+尿素添加、刈割+缓释尿素添加, 每种处理6个重复, 共36个小区。在不同处理条件下测定土壤呼吸速率、土壤温度、土壤水分、土壤微生物生物量、土壤无机氮含量、植物地上和地下生物量, 并计算土壤累积碳排放量及CO₂通量。研究结果表明: (1)短期(2017-2018年)尿素和缓释尿素的添加显著提高了该地区土壤呼吸速率和土壤累积碳排放量。与添加缓释尿素相比, 添加尿素处理下的土壤呼吸速率和累积碳排放量更高; (2)刈割显著降低土壤呼吸速率和累积碳排放量; (3)短期氮添加和刈割的交互作用对土壤呼吸速率没有显著影响。因此, 短期氮添加促进了北方农牧交错带盐碱化草地土壤碳释放, 刈割抑制土壤呼吸, 降低了累积碳排放量, 这可能是由于刈割移除地上植物, 减少了凋落物的输入, 底物减少导致土壤微生物活性降低。但是随着处理时间的延长, 氮添加和刈割对该农牧交错带盐碱化草地土壤碳动态的影响还有待进一步探究和发现。     

中国森林生态系统土壤呼吸温度敏感性空间变异特征及影响因素

土壤呼吸的温度敏感性(Q₁₀)是陆地碳循环与气候系统间相互作用的关键参数。尽管已有大量关于不同类型森林Q₁₀季节和年际变化规律的研究, 但是对Q₁₀在区域尺度的空间变异特征及其影响因素仍认识不足, 已有结果缺乏一致结论。该研究通过整合已发表论文, 构建了中国森林生态系统年尺度Q₁₀数据集, 共包含399条记录、5种森林类型(落叶阔叶林(DBF)、落叶针叶林(DNF)、常绿阔叶林(EBF)、常绿针叶林(ENF)、混交林(MF))。分析了不同森林类型Q₁₀的空间变异特征及其与地理、气候和土壤因素的关系。结果显示, 1) Q₁₀介于1.09到6.24之间, 平均值(±标准误差)为2.37 (± 0.04), 且在不同森林类型之间无显著差异; 2)当考虑所有森林类型时, Q₁₀随纬度、海拔、土壤有机碳含量(SOC)和土壤全氮含量(TN)的增加而增大, 随经度、年平均气温(MAT)、平均年降水量(MAP)的增加而减小。气候(MAT、MAP)和土壤(SOC、TN)因素间存在相互作用, 共同解释了33%的Q₁₀空间变异, 其中MAT和SOC是Q₁₀空间变异的主要驱动因素; 3)不同类型森林Q₁₀对气候和土壤因素的响应存在差异。在DNF中Q₁₀随MAP的增加而减小, 而其他类型森林中Q₁₀与MAP无显著相关性; 在EBF、DBF、ENF中Q₁₀随TN的增加而增大, 但Q₁₀对TN的敏感性在EBF中最高, 在ENF中最低。这些结果表明, 尽管Q₁₀有一定的集中分布趋势, 但仍有较大范围的空间变异, 在进行碳收支估算时应注意尺度问题。Q₁₀的主要驱动因素和Q₁₀对环境因素的响应随森林类型而变化, 在气候变化情景下, 不同森林类型间Q₁₀可能发生分异。因此, 未来的碳循环-气候模型还应考虑不同类型森林碳循环关键参数对气候变化的响应差异。     

不同郁闭度对野外回归的梓叶槭幼树形态和生理特征的影响

濒危植物野外回归是扩大极小种群野生植物种群的有效途径。适宜的回归生境是物种生长的必要条件, 研究植物的生理生态特征对不同野外回归生境的适应性, 是科学评价濒危物种种群回归生境适宜性的关键指标。本文以野外回归的极小种群野生植物梓叶槭(Acer catalpifolium)为研究对象, 探讨了无遮荫、林缘、林隙以及林下(郁闭度由小到大) 4种不同光照条件对梓叶槭幼树的形态特征、光合特征、类黄酮指数及叶绿素含量等的影响。结果表明: (1)随着郁闭度的增大, 梓叶槭幼树的基径、冠幅以及新生枝条数量产生差异, 均呈现先增大后减小的趋势; (2)在林缘生境中, 梓叶槭幼树的单叶面积及单叶质量均最大, 比叶面积随着郁闭度的增大而增大; (3)随着郁闭度的增大, 梓叶槭叶片胞间CO₂浓度、蒸腾速率及气孔导度均呈现先减小后增大的趋势, 叶绿素含量呈现上升趋势, 类黄酮指数则呈现先增大后减小的趋势。综上可知, 林缘适宜的光照条件更适合梓叶槭野外回归。这一结果可为梓叶槭以及其他极小种群野生植物的回归生境适宜性的探索研究提供借鉴。     

慢性乙型肝炎患者TBIL、ALT、γ GT、 TBA水平变化及肠道菌群分析

目的研究慢性乙型肝炎患者总胆红素(TBIL)、丙氨酸氨基转移酶(ALT)、γ-谷氨酰转肽酶(γ-GT)、总胆汁酸(TBA)水平及肠道菌群变化。方法选取2017年10月至2018年10月我院收治的慢性乙型肝炎患者80例为观察组,选取同期来我院进行体检的100例健康者为对照组,对比两组对象肝功能指标、血清炎性因子水平和肠道菌群数量。结果观察组患者血清TBIL、ALT、TBA和γ-GT水平显著高于对照组(均P0.05)。观察组患者血清CRP、TNF-α和IL-6水平显著高于对照组(均P0.05)。观察组患者肠道肠杆菌科、普雷沃菌属、拟杆菌属、梭菌属细菌及白假丝酵母数量显著高于对照组(均P0.05)。两组对象肠道瘤胃球菌属、双歧杆菌属、乳杆菌属细菌及粪肠球菌数量差异无统计学意义(均P0.05)。结论慢性乙型肝炎患者TBIL、ALT、γ-GT、TBA水平高于健康人群,炎性因子水平也高于正常人群,且存在一定程度的肠道菌群失调。提示肠道菌群结构变化可能对肝脏组织产生一定的损伤。     

Increased diversity and concordant shifts in community structure of coral‐associated Symbiodiniaceae and bacteria subjected to chronic human disturbance

Both coral‐associated bacteria and endosymbiotic algae (Symbiodiniaceae spp.) are vitally important for the biological function of corals. Yet little is known about their co‐occurrence within corals, how their diversity varies across coral species, or how they are impacted by anthropogenic disturbances. Here, we sampled coral colonies (n = 472) from seven species, encompassing a range of life history traits, across a gradient of chronic human disturbance (n = 11 sites on Kiritimati [Christmas] atoll) in the central equatorial Pacific, and quantified the sequence assemblages and community structure of their associated Symbiodiniaceae and bacterial communities. Although Symbiodiniaceae alpha diversity did not vary with chronic human disturbance, disturbance was consistently associated with higher bacterial Shannon diversity and richness, with bacterial richness by sample almost doubling from sites with low to very high disturbance. Chronic disturbance was also associated with altered microbial beta diversity for Symbiodiniaceae and bacteria, including changes in community structure for both and increased variation (dispersion) of the Symbiodiniaceae communities. We also found concordance between Symbiodiniaceae and bacterial community structure, when all corals were considered together, and individually for two massive species, Hydnophora microconos and Porites lobata, implying that symbionts and bacteria respond similarly to human disturbance in these species. Finally, we found that the dominant Symbiodiniaceae ancestral lineage in a coral colony was associated with differential abundances of several distinct bacterial taxa. These results suggest that increased beta diversity of Symbiodiniaceae and bacterial communities may be a reliable indicator of stress in the coral microbiome, and that there may be concordant responses to chronic disturbance between these communities at the whole‐ecosystem scale.     

Heterogeneous genetic invasions of three insecticide resistance mutations in Indo‐Pacific populations of Aedes aegypti (L.)

Nations throughout the Indo‐Pacific region use pyrethroid insecticides to control Aedes aegypti, the mosquito vector of dengue, often without knowledge of pyrethroid resistance status of the pest or origin of resistance. Two mutations (V1016G + F1534C) in the sodium channel gene (Vssc) of Ae. aegypti modify ion channel function and cause target‐site resistance to pyrethroid insecticides, with a third mutation (S989P) having a potential additive effect. Of 27 possible genotypes involving these mutations, some allelic combinations are never seen whereas others predominate. Here, five allelic combinations common in Ae. aegypti from the Indo‐Pacific region are described and their geographical distributions investigated using genome‐wide SNP markers. We tested the hypothesis that resistance allele combinations evolved de novo in populations versus the alternative that dispersal of Ae. aegypti between populations facilitated genetic invasions of allele combinations. We used latent factor mixed‐models to detect SNPs throughout the genome that showed structuring in line with resistance allele combinations and compared variation at SNPs within the Vssc gene with genome‐wide variation. Mixed‐models detected an array of SNPs linked to resistance allele combinations, all located within or in close proximity to the Vssc gene. Variation at SNPs within the Vssc gene was structured by resistance profile, whereas genome‐wide SNPs were structured by population. These results demonstrate that alleles near to resistance mutations have been transferred between populations via linked selection. This indicates that genetic invasions have contributed to the widespread occurrence of Vssc allele combinations in Ae. aegypti in the Indo‐Pacific region, pointing to undocumented mosquito invasions between countries.     

Genetic evidence for the origin of Aedes aegypti,the yellow fever mosquito,in the southwestern Indian Ocean

Aedes aegypti is among the best‐studied mosquitoes due to its critical role as a vector of human pathogens and ease of laboratory rearing. Until now, this species was thought to have originated in continental Africa, and subsequently colonized much of the world following the establishment of global trade routes. However, populations of this mosquito on the islands in the southwestern Indian Ocean (SWIO), where the species occurs with its nearest relatives referred to as the Aegypti Group, have received little study. We re‐evaluated the evolutionary history of Ae. aegypti and these relatives, using three data sets: nucleotide sequence data, 18,489 SNPs and 12 microsatellites. We found that: (a) the Aegypti Group diverged 16 MYA (95% HPD: 7–28 MYA) from its nearest African/Asian ancestor; (b) SWIO populations of Ae. aegypti are basal to continental African populations; (c) after diverging 7 MYA (95% HPD: 4–15 MYA) from its nearest formally described relative (Ae. mascarensis), Ae. aegypti moved to continental Africa less than 85,000 years ago, where it recently (<1,000 years ago) split into two recognized subspecies Ae. aegypti formosus and a human commensal, Ae. aegypti aegypti; (d) the Madagascar samples form a clade more distant from all other Ae. aegypti than the named species Ae. mascarensis, implying that Madagascar may harbour a new cryptic species; and (e) there is evidence of introgression between Ae. mascarensis and Ae. aegypti on Réunion, and between the two subspecies elsewhere in the SWIO, a likely consequence of recent introductions of domestic Ae. aegypti aegypti from Asia.     

Taxonomic differences shape the responses of freshwater aerobic anoxygenic phototrophic bacterial communities to light and predation

Aerobic anoxygenic phototrophic (AAP) bacteria are a phylogenetically diverse and ubiquitous group of prokaryotes that use organic matter but can harvest light using bacteriochlorophyll a. Although the factors regulating AAP ecology have long been investigated through field surveys, the few available experimental studies have considered AAPs as a group, thus disregarding the potential differential responses between taxonomically distinct AAP assemblages. Here, we used sequencing of the pufM gene to describe the diversity of AAPs in 10 environmentally distinct temperate lakes, and to investigate the taxonomic responses of AAP communities in these lakes when subjected to similar experimental manipulations of light and predator removal. The studied communities were clearly dominated by Limnohabitans AAP but presented a clear taxonomic segregation between lakes presumably driven by local conditions, which was maintained after experimental manipulations. Predation reduction (but not light exposure) caused significant compositional shifts across most assemblages, but the magnitude of these changes could not be clearly related to changes in bulk AAP abundances or taxonomic richness of AAP assemblages during experiments. Only a few operational taxonomic units, which differed taxonomically between lakes, were found to respond positively during experimental treatments. Our results highlight that different freshwater AAP communities respond differently to similar control mechanisms, highlighting that in‐depth knowledge on AAP diversity is essential to understand the ecology and potential role of these photoheterotrophs.     

Efficient deletion of LoxP-flanked selectable marker genes from the genome of transgenic pigs by an engineered Cre recombinase

Genetically modified (GM) pigs hold great promises for pig genetic improvement, human health and life science. When GM pigs are produced, selectable marker genes (SMGs) are usually introduced into their genomes for host cell or animal recognition. However, the SMGs that remain in GM pigs might have multiple side effects. To avoid the possible side effects caused by the SMGs, they should be removed from the genome of GM pigs before their commercialization. The Cre recombinase is commonly used to delete the LoxP sites-flanked SMGs from the genome of GM animals. Although SMG-free GM pigs have been generated by Cre-mediated recombination, more efficient and cost-effective approaches are essential for the commercialization of SMG-free GM pigs. In this article we describe the production of a recombinant Cre protein containing a cell-penetrating and a nuclear localization signal peptide in one construct. This engineered Cre enzyme can efficiently excise the LoxP-flanked SMGs in cultured fibroblasts isolated from a transgenic pig, which then can be used as nuclear donor cells to generate live SMG-free GM pigs harboring a desired transgene by somatic cell nuclear transfer. This study describes an efficient and far-less costly method for production of SMG-free GM pigs.