Unconditional and conditional QTL analysis of kernel weight related traits in wheat (Triticum aestivum L.) in multiple genetic backgrounds

Wheat thousand kernel weight (TKW) is a complex trait, and is largely controlled by several kernel traits, including kernel length (KL) and kernel width (KW). In order to reveal the genetic relationship between TKW and these kernel traits (KW and KL) as accurate as possible, we applied both unconditional and conditional mapping analyses to three distinct genetic populations, one DH population and two RIL populations. This report describes the identifications of 36 unconditional and conditional additive QTLs and 30 pairs of unconditional and conditional epistatic QTLs, all of which are closely associated with TKW. While the conditional additive locus Qtkw1B, detected in the RIL2 population, exhibited the largest contribution, explaining 14.12 % of TKW variance, the unconditional epistatic QTLs Qtkw3A-2/Qtkw5B.1, detected in the DH population, accounted for 11.95 % of phenotypic variance. This study also showed that, compared with unconditional mapping, conditional mapping resulted in very different numbers and different extent of effects of additive and epistatic QTLs that were associated with TKW when TKW was conditioned on kernel traits (KW and KL). These data strongly suggest that KW and KL indeed play a significant role in determining TKW. Furthermore, we demonstrated that the effects of the 25 additive QTLs for TKW were either entirely or largely determined by KW, while the effects of the other 25 additive QTLs for TKW were either entirely or largely affected by KL. We conclude that the conditional mapping can be useful for a better understanding of the interrelationship between the yield contributing traits at the QTL level.     

4C-克隆筛选过程中的质量控制

环形染色体构象俘获(Circular chromosome conformation capture,4C)是一种高通量研究细胞染色体相互作用、空间构象的技术。文章通过模拟的4C样品,优化反向PCR条件,建立了高效、特异的扩增方法,对4C克隆筛选等后续步骤进行严格的质量控制并对该方法的可行性进行了实例验证。该4C-克隆筛选方法作为4C方法的质量控制标准,具有重要的指导和监测作用。     

M16添加牛磺酸和EDTA支持昆明白小鼠体外受精并发育至囊胚

在以往研究工作的基础上证明了通过添加2.5mmol/L的牛磺酸和0.1mmol/L的EDTA至M16培养液中,可支持昆明白小鼠的体外受精（IVF）,并支持受精卵突破2－细胞阻滞发育至囊胚期。本研究进一步证明了牛磺酸和EDTA在昆明小鼠早期胚胎发育和克服2－细胞阻滞中起关键作用。 Abstract:The results of our early experiments show that the 2-cell block can be overcome by culturing zygote in modified M16 ,modified CZB and TE medium.Our research shows that the taurine and EDTA play key role in overcoming 2-cell block in Kunming mouse.The results show that the addition of taurine and EDTA to M16 medium can support the IVF and develoment to blastocyst in vitro in Kunming strain mice.This is the first report that M16 medium added with taurine and EDTA can be used in both IVF and culture medium to overcome the 2-cell block of embryo development in Kunming strain mouse.     

胚胎干细胞移植治疗帕金森病

胚胎干细胞起源于植入前胚胎的内细胞团(inner cell mass,ICM),能够在体外进行增殖并能分化成三个胚层的所有细胞类型.如果能有效地将胚胎干细胞(embryonic stem cell,ES细胞)诱导分化为特定的细胞类型,ES细胞将成为细胞替代治疗中供体细胞的一个理想来源,从而可以应用于帕金森病(Parkinson's disease,PD)、糖尿病、心脓死等的退行性病变疾病的治疗.近年来,将ES细胞来源的多巴胺能神经元用于PD治疗的研究越来越广泛.现对这些研究中有关基因表达调控、实验研究进展、临床应用以及所遇到的问题作一综述.虽然这些研究还没能最终大面积应用于临床.但为PD的治疗提供了一个广阔的应用前景.     

一株南海北部深海沉积环境真菌00457的鉴定及其活性研究

从南海深海沉积环境样品中分离到一株编号为00457的真菌,基于形态学特征、ITS和5.8S rDNA序列比对分析,鉴定该菌株为白黄笋顶孢霉( Acrostalagmus luteoalbus).活性研究表明,其代谢产物粗浸膏的卤虫致死活性明显,并具有一定强度的抑菌和DPPH自由基清除活性.此外,研究还发现代谢产物粗浸膏在25-100℃持续加热不超过30 min时,卤虫致死活性成分稳定,但在100C持续加热超过60 min后卤虫致死活性成分显著减少,而一定强度的紫外光照射90 min内则无显著影响.     

丝状真菌代谢工程研究进展

丝状真菌(Filamentous fungi)作为重要的工业发酵微生物,在有机酸、蛋白质及次级代谢产物等关键生物基产品生产方面发挥着重要作用.自20世纪90年代代谢工程理念提出以来,尤其是代谢工程使能技术的创新及发展,极大地促进了丝状真菌细胞工厂的构建及其在工业发酵领域的应用.文中将系统介绍近年来丝状真菌代谢工程技术的...     

Site-specific incorporation of unnatural amino acids into urate oxidase in Escherichia coli

Urate oxidase catalyzes the oxidation of uric acid with poor solubility to produce 5-hydroxyisourate and allantoin. Since allantoin is excreted in vivo, urate oxidase has the potential to be a therapeutic target for the treatment of gout. However, its severe immunogenicity limits its clinical application. Furthermore, studies on the structure-function relationships of urate oxidase have proven difficult. We developed a method for genetically incorporating p-azido-L-phenylalanine into target protein in Escherichia coli in a site-specific manner utilizing a tyrosyl suppressor tRNA/aminoacyl-tRNA synthetase system. We substituted p-azido-L-phenylalanine for Phe(170) or Phe(281) in urate oxidase. The products were purified and their enzyme activities were analyzed. In addition, we optimized the system by adding a "Shine-Dalgarno (SD) sequence" and tandem suppressor tRNA. This method has the benefit of site-specifically modifying urate oxidase with homogeneous glycosyl and PEG derivates, which can provide new insights into structure-function relationships and improve pharmacological properties of urate oxidase.     

Novel putative galactose operon involving lacto-N-biose phosphorylase in Bifidobacterium longum

A lacto-N-biose phosphorylase (LNBP) was purified from the cell extract of Bifidobacterium bifidum. Its N-terminal and internal amino acid sequences were homologous with those of the hypothetical protein of Bifidobacterium longum NCC2705 encoded by the BL1641 gene. The homologous gene of the type strain B. longum JCM1217, lnpA, was expressed in Escherichia coli to confirm that it encoded LNBP. No significant identity was found with any proteins with known function, indicating that LNBP should be classified in a new family. The lnpA gene is located in a novel putative operon for galactose metabolism that does not contain a galactokinase gene. The operon seems to be involved in intestinal colonization by bifidobacteria mediated by metabolism of mucin sugars. In addition, it may also resolve the question of the nature of the bifidus factor in human milk as the lacto-N-biose structure found in milk oligosaccharides.     

The cell agglutination agent, phytohemagglutinin-L, improves the efficiency of somatic nuclear transfer cloning in cattle (Bos taurus)

One of the several factors that contribute to the low efficiency of mammalian somatic cloning is poor fusion between the small somatic donor cell and the large recipient oocyte. This study was designed to test phytohemagglutinin (PHA) agglutination activity on fusion rate, and subsequent developmental potential of cloned bovine embryos. The toxicity of PHA was established by examining its effects on the development of parthenogenetic bovine oocytes treated with different doses (Experiment 1), and for different durations (Experiment 2). The effective dose and duration of PHA treatment (150 microg/mL, 20 min incubation) was selected and used to compare membrane fusion efficiency and embryo development following somatic cell nuclear transfer (Experiment 3). Cloning with somatic donor fibroblasts versus cumulus cells was also compared, both with and without PHA treatment (150 microg/mL, 20 min). Fusion rate of nuclear donor fibroblasts, after phytohemagglutinin treatment, was increased from 33 to 61% (P < 0.05), and from 59 to 88% (P < 0.05) with cumulus cell nuclear donors. The nuclear transfer (NT) efficiency per oocyte used was improved following PHA treatment, for both fibroblast (13% versus 22%) as well as cumulus cells (17% versus 34%; P < 0.05). The cloned embryos, both with and without PHA treatment, were subjected to vitrification and embryo transfer testing, and resulted in similar survival (approximately 90% hatching) and pregnancy rates (17-25%). Three calves were born following vitrification and embryo transfer of these embryos; two from the PHA-treated group, and one from non-PHA control group. We concluded that PHA treatment significantly improved the fusion efficiency of somatic NT in cattle, and therefore, increased the development of cloned blastocysts. Furthermore, within a determined range of dose and duration, PHA had no detrimental effect on embryo survival post-vitrification, nor on pregnancy or calving rates following embryo transfer.