玉米花粉单倍体植株染色体上异染色质的变异

我们用Giemsa BSG C-带技术检查了玉米花药培养获得的花粉单倍体植株根尖细胞染色体上异染色质的变异,观察结果表明,有的植株所显示的C-带数目是与供体植株的相一致,有的植株所显示的C-带数目则发生了显著变化,其中有的增加,有的减少。并讨论了异染色质发生变异的可能原因。还相应地观察到间期核中染色中心的变化是与中期染色体上C-带数目的变化相一致。     

胃癌组织中MMP-7和TIMP-1的表达及意义

目的:探讨基质金属蛋白酶-7(MMP-7)及其组织抑制剂-1(TIMP-1)与胃癌发生发展的关系.方法:采用免疫组化技术检测46例胃癌组织和相应癌旁组织中MMP-7和TIMP-1的表达,结合病人临床病理资料进行综合分析.结果:胃癌组织中MMP-7阳性表达率(60.87%)显著高于相应癌旁组织,差异有统计学意义(P<0.05);其表达与淋巴结转移(P<0.05)相关.胃癌组织中TIMP-1的阳性表达率(93.48%)明显高于相应癌旁组织(63.04%),差异有统计学意义(P<0.05);其表达与淋巴结转移相关(P<0.05).结论:MMP-7与胃癌的侵袭转移有关,TIMP-1有可能成为评价胃癌恶性生物学行为的指标.     

4种杀虫剂对胡瓜钝绥螨成螨的急性毒性

测定了4种常用杀虫剂针对目标害虫推荐使用浓度范围对天敌胡瓜钝绥螨Neoseiulus cucumeris成螨的毒力测定、综合急性毒性和二次中毒毒性.综合急性毒性和二次中毒毒性测定结果显示,毒死蜱Chlorphifos、灭幼脲Chlorbenzurin、吡虫啉Imidacloprid对胡瓜钝绥螨都具有极强的毒性,可造成毁灭性杀伤,苏云金杆菌Bt对胡瓜钝绥螨影响极小,无明显毒性.玻片浸渍法测定的不同杀虫剂对胡瓜钝绥螨的毒力大小依次为:毒死蜱Chlorphifos(乐斯本)＞灭幼脲Chlorbenzurin＞吡虫啉Imidacloprid＞苏云金杆菌Bt.     

A novel butyrolactone derivative inhibited apoptosis and depressed integrin beta4 expression in vascular endothelial cells

To understand the effects of a novel butyrolactone derivative, 3-benzyl-5-((2-nitrophenoxy) methyl)-dihydrofuran-2(3H)-one (3BDO), on the apoptosis of vascular endothelial cells (VECs), we exposed 3BDO (20-60 microg/ml) to VECs deprived of serum and FGF-2 for 24 and 48 h, respectively. The results showed that 3BDO (20-60 microg/ml) increased VEC viability and inhibited VEC apoptosis induced by deprivation of serum and FGF-2 in a very weak dose-dependent manner. During this process, integrin beta4 expression was depressed, but the level of reactive oxygen species (ROS) was not changed. The data suggested that 3BDO (20-60 microg/ml) could inhibit VEC apoptosis and suppress integrin beta4 expression, but it could not depress the ROS level induced by deprivation of serum and FGF-2.     

遗传标记及其在作物品种鉴定中的应用

本文评述了用于作物品种鉴定的形态标记（morphological markers）、细胞标记（cytological markers）、生化标记（biochemical markers）、分子标记（molecular markers）的优缺点。重点评述了分子标记在作物品种鉴定中的应用。文中除对蛋白质电泳指纹图谱——同工酶和贮藏蛋白（包括醇溶性蛋白、清蛋白、谷蛋白、球蛋白等）电泳产生的指纹图谱的应用外,较详细地介绍了近年来DNA指纹图谱技术;包括限制片段长度多态性（restriction fragment length polymorphism,简称RFLP）、随机扩增多态性DNA (random amplified po lymorphic DNA,简称RAPD)、小卫星DNA（minisatellite DNA）、微卫星DNA（microsatellite DNA）,简单重复序列间扩增（intersimple sequence repeats,简称ISSR）,扩增片段长度多态性（amplified fragment length polymorphism,简称AFLP）以及CAPS (cleaved amplified polymorphic sequences)和SNPS (single nucleotide polymorphisms)对作物品种鉴定和新品种登记,品种纯度和真实性的检验以及品种间亲缘关系的探讨和在分类研究中的贡献等。     

A peptide mimetic of Gal-alpha 1,3-Gal is able to block human natural antibodies

The carbohydrate of Gal-alpha1,3-Gal is thought to be the major antigenic epitope present on pig vascular endothelium. The peptides that mimic the binding of antigenic epitope (Gal-alpha1,3-Gal) to lectin BS-I-B4 were identified from screening a filamentous phage-displayed random library. A phage bearing the peptide NCVSPYWCEPLAPSARA has been identified to bind the lectin strongly. Melibiose was able to inhibit the binding of the human natural anti-alpha Gal antibody to the peptide competitively. Our experiments show that the peptide mimetic of Gal-alpha1,3-Gal is able to inhibit the agglutination of pig RBCs by human natural antibody or lectin BS-I-B4. The peptide inhibitor of human natural antibodies may prove useful in pig-to-human xenotransplantation.     

Isolation and characterization of phenanthrene-degrading <Emphasis Type="Italic">Sphingomonas paucimobilis</Emphasis> strain ZX4

Phenanthrene-degrading bacterium strain ZX4 was isolated from an oil-contaminated soil, and identified as Sphingomonas paucimobilis based on 16S rDNA sequence, cellular fatty acid composition, mol% G + C and Biolog-GN tests. Besides phenanthrene, strain ZX4 could also utilize naphthalene, fluorene and other aromatic compounds. The growth on salicylic acid and catechol showed that the strain degraded phenanthrene via salicylate pathway, while the assay of catechol 2, 3-dioxygenase revealed catechol could be metabolized through meta-cleavage pathway. Three genes, including two of meta-cleavage operon genes and one of GST encoding gene were obtained. The order of genes arrangement was similar to S-type meta-pathway operons. The phylogenetic trees based on 16S rDNA sequence and meta-pathway gene both revealed that strain ZX4 is clustered with strains from genus Sphingomonas.     

DGGE analysis of 16S rDNA of ammonia-oxidizing bacteria in chemical–biological flocculation and chemical coagulation systems

Microbial community DNA was extracted from activated sludge samples taken from a chemical bioflocculation process and a chemical coagulation process in Shanghai, China. 16S rDNA of ammonia-oxidizing bacteria (AOB)was amplified by nested polymerase chain reaction and fingerprinted by denaturing gradient gel electrophoresis for microbial structure analysis. The Shannon diversity index of each sample was determined. The results indicated that the microbial structure of AOB in chemical bioflocculation process was comparable at two operational conditions. The ammonia-oxidizing bacterial communities were similar in three channels of the chemical bioflocculation process and in three serial tanks in the chemical coagulation process at the same condition. The diversity of microbial structures in the chemical bioflocculation process was higher than in the chemical coagulation process, in which the microbial structure was similar to that in the influent. Although the microbial study provides insights to the nitrification removal, higher microbial diversity of AOB does not necessarily mean higher ammonia oxidization. Molecular analysis should be combined with chemical assays to optimize operational conditions.     

中国洞穴甲壳动物多样性及其对洞穴环境的适应性

简要阐述了洞穴环境的研究现状以及洞穴动物的生态特征,初步探讨了中国洞穴甲壳动物的形成过程、多样性、地理分布以及对洞穴环境的适应性。截止到2008年10月,我国已记录的洞穴甲壳动物(主要指十足目虾类和端足目钩虾类)共有33种,分别隶属6科10属,主要分布在贵州省、广西省等喀斯特洞穴密集地区。洞穴甲壳动物由于长期生活在洞穴的黑暗带,食物匮乏,水温恒定,CO2浓度过高,且O2浓度相对较少的环境中,其在形态结构、消化系统、生理及行为等方面逐渐表现出与地表甲壳动物不同的适应性特征。如:眼缺失、体无色、触角和附肢显著增长、新陈代谢减慢、代谢率小,昼夜节律降低,不能调节体温,生活步调放慢,寿命长,发育周期长等。     

Towards precise classification of cancers based on robust gene functional expression profiles

Background

Despite the continuous production of genome sequence for a number of organisms, reliable, comprehensive, and cost effective gene prediction remains problematic. This is particularly true for genomes for which there is not a large collection of known gene sequences, such as the recently published chicken genome. We used the chicken sequence to test comparative and homology-based gene-finding methods followed by experimental validation as an effective genome annotation method.

Results

We performed experimental evaluation by RT-PCR of three different computational gene finders, Ensembl, SGP2 and TWINSCAN, applied to the chicken genome. A Venn diagram was computed and each component of it was evaluated. The results showed that de novo comparative methods can identify up to about 700 chicken genes with no previous evidence of expression, and can correctly extend about 40% of homology-based predictions at the 5' end.

Conclusions

De novo comparative gene prediction followed by experimental verification is effective at enhancing the annotation of the newly sequenced genomes provided by standard homology-based methods.