基于野外调查和同质种植园实验的芦苇植物功能性状变异研究

研究表型可塑性和遗传变异在植物表型分化中的相对作用,有助于预测全球环境变化下的植物群落组成和生态系统功能的变化。芦苇（Phragmites australis）是全球性广布的草本植物,种内变异丰富,在我国西北和东部均存在多个分化稳定的生态型,但中国芦苇在更大尺度上的表型研究还非常匮乏。将位于黄河上游的宁夏平原和黄河下游的黄河三角洲作为研究区域,通过野外调查和同质种植园实验对芦苇自然种群的植物功能性状变异进行观测。结果表明,无论在野外还是同质种植园,黄河三角洲芦苇的基径、叶长和叶宽均显著大于宁夏平原芦苇,说明两个地区的芦苇种群之间存在着受遗传决定的表型分化,这可能与两个地区间的降水等气候差异有关。在野外,宁夏芦苇的株高和叶厚显著大于黄河三角洲芦苇,但在同质园中差异消失或相反,说明株高、叶厚受环境影响较大,表型可塑性也是芦苇适应环境变化的重要机制。在同质种植园中,宁夏平原芦苇的叶片氮磷含量较低,但株数却显著多于黄河三角洲芦苇,反映了不同地区芦苇之间存在不同的适应策略,宁夏平原芦苇更偏向于高扩散率的杂草策略,而黄河三角洲芦苇更偏向于竞争策略。此外,宁夏平原芦苇的株高、叶长两个性状以及基径-比叶面积相关性在野外和同质园两个环境中存在一致性,表明了性状变异和权衡策略的遗传稳定性。综上,位于黄河上下游的芦苇种群间存在着适应性分化,这是表型可塑性和遗传变异共同作用的结果,不同来源芦苇对全球变化下的多重环境因子的响应还需要进一步研究。     

中国陆地生态系统碳源/汇整合分析

国家尺度陆地生态系统碳收支及其循环过程的研究对于提升地球系统科学与全球变化科学的科技创新能力、提高我国参与应对全球气候变化国际行动和维护国家利益的话语权、保障国家生态安全和改进生态系统管理都具有重要意义。近年来,我国已经在气候变化与陆地生态系统碳循环领域开展了大量的研究工作,主要包括国家清查、生态系统模型模拟、大气反演等手段。然而,由于大尺度陆地生态系统碳源/汇的估算存在很大的不确定性,目前尚未形成国家尺度的陆地生态系统碳源/汇的整合分析。通过搜集已发表的关于中国陆地生态系统及其组分碳源/汇的59篇文献,整合国家清查、生态系统模型模拟、大气反演3种研究手段,分析中国陆地生态系统碳源/汇大小以及时间尺度上的动态变化。结果表明,在1960s-2010s期间中国陆地生态系统碳汇整体呈上升趋势,平均为（0.213±0.030）Pg C/a,其中森林、草地、农田和灌木生态系统碳汇分别为（0.101±0.023）Pg C/a、（0.032±0.007）Pg C/a、（0.043±0.010）Pg C/a和（0.028±0.010）Pg C/a。森林生态系统中的植被碳汇远大于土壤碳汇,然而这种格局在草地和农田生态系统却相反,而且1960s-2010s期间中国主要植被类型的生态系统碳汇总体上随时间呈增加趋势。融合多源数据（地面观测、激光雷达、卫星遥感等）、多尺度数据（样地尺度、站点尺度、区域尺度）以及多手段数据（联网观测、森林清查、模型模拟）,有助于全面准确地评估中国陆地生态系统碳源/汇及其对气候变化的响应。     

Comprehensive Analysis of Synonymous Codon Usage Bias for Complete Genomes and E2 Gene of Atypical Porcine Pestivirus

Atypical porcine pestivirus (APPV) is an emerging novel pestivirus causing the congenital tremor (CT) in piglets. The worldwide distribution characteristic of APPV make it a threat to global swine health. E2 is the major envelope glycoprotein of APPV and the crucial target for vaccine development. Considering the genetic variability of APPV complete genomes and its E2 gene as well as gaps for codon analysis, a comprehensive analysis of codon usage patterns was performed. Relative synonymous codon usage (RSCU) and effective number of codon (ENC) analyses showed that a relatively instable change existed and a slight low codon usage bias (CUB) were displayed in APPV genomes. ENC-plot analysis and correlation analyses of nucleotide compositions and ENC showed that mutation pressure and natural selection both affected the codon usage bias of the APPV and natural selection had a more obvious influence for E2 gene compared with complete genomes. Principal component analysis (PCA) and correlation analyses confirmed the above results. Correlation analyses between Gravy and Aromaticity values and the codon bias showed that natural selection played an important role in shaping the synonymous codon bias. Furthermore, neutrality plot analysis showed that natural selection was the main force while mutation pressure was a minor force influencing the codon usage pattern of the APPV E2 gene and complete genomes. The results could illustrate the codon usage patterns of APPV genomes and provided valuable basic data for further fundamental research of evolution of APPV.

     

Differences in relative air humidity affect responses to soil salinity in freshwater and salt marsh populations of the dominant grass species Phragmites australis

Hydrobiologia - Soil salinity diminishes the dominance of species and affects their distribution. Phragmites australis is a dominant ecosystem engineer with broad distribution, high intraspecific...     

非结构蛋白在非洲猪瘟病毒感染中作用

非洲猪瘟(African swine fever,ASF)是由非洲猪瘟病毒(African swine fever virus,ASFV)感染引起的一种急性、出血性猪传染病,给疫情发生国家(地区)的养猪业造成重大经济损失.ASFV为双股DNA病毒,基因组含有150～167个开放阅读框(ORFs),可编码150～200种蛋白质,其中非结构蛋白有100余种.ASFV编码的酶、转录因子、调节宿主细胞功能蛋白和病毒免疫逃逸相关蛋白等作为重要的非结构蛋白,在病毒核苷酸代谢、DNA复制、修复、转录、蛋白修饰以及病毒与宿主细胞相互作用等过程中发挥重要作用,但仍有许多非结构蛋白的功能尚不明晰.因此,本文综述了 ASFV非结构蛋白在病毒感染中的作用,以期为ASFV非结构蛋白的进一步研究提供参考.     

A Multicenter Study of Viral Aetiology of Community-Acquired Pneumonia in Hospitalized Children in Chinese Mainland

Virologica Sinica - Community-acquired pneumonia (CAP) is one of the leading causes of morbidity and mortality in children worldwide. In this study, we aimed to describe the aetiology of viral...     

Slc20a1b is essential for hematopoietic stem/progenitor cell expansion in zebrafish

Science China Life Sciences - Hematopoietic stem and progenitor cells (HSPCs) are able to self-renew and can give rise to all blood lineages throughout their lifetime, yet the mechanisms regulating...     

Three‐dimensional reconstruction and comparison of vacuolar membranes in response to viral infection

The vacuole is a unique plant organelle that plays an important role in maintaining cellular homeostasis under various environmental stress conditions. However, the effects of biotic stress on vacuole structure has not been examined using three‐dimensional (3D) visualization. Here, we performed 3D electron tomography to compare the ultrastructural changes in the vacuole during infection with different viruses. The 3D models revealed that vacuoles are remodeled in cells infected with cucumber mosaic virus (CMV) or tobacco necrosis virus A Chinese isolate (TNV‐A^C), resulting in the formation of spherules at the periphery of the vacuole. These spherules contain neck‐like channels that connect their interior with the cytosol. Confocal microscopy of CMV replication proteins 1a and 2a and TNV‐A^C auxiliary replication protein p23 showed that all of these proteins localize to the tonoplast. Electron microscopy revealed that the expression of these replication proteins alone is sufficient to induce spherule formation on the tonoplast, suggesting that these proteins play prominent roles in inducing vacuolar membrane remodeling. This is the first report of the 3D structures of viral replication factories built on the tonoplasts. These findings contribute to our understanding of vacuole biogenesis under normal conditions and during assembly of plant (+) RNA virus replication complexes.     

不同碳氮源对花脸香蘑胞外酶活性的影响

以花脸香蘑Lepista sordida为材料,研究其分别在9种碳源和11种氮源液体培养条件下不同阶段pH值和葡萄糖浓度的变化,以及不同碳氮源对其所分泌的木质素过氧化物酶、羧甲基纤维素酶、锰过氧化物酶和漆酶活性的影响。结果表明,pH值在不同碳源培养后期变化显著（P<0.05）,而在不同氮源培养阶段无明显变化（P>0.05）,葡萄糖浓度和菌丝量在不同碳氮源中也无显著差异（P<0.05）。不同碳源和氮源培养基对花脸香蘑木质素过氧化物酶、羧甲基纤维素酶、锰过氧化物酶和漆酶活性均具有影响（P<0.05）。木糖和米糠有利于花脸香蘑分泌羧甲基纤维素酶（P<0.05）,红糖和牛肉浸膏有利于其分泌漆酶（P<0.05）,白砂糖和豆粉有利于其分泌锰过氧化物酶（P<0.05）,木糖和尿素有利于其分泌木质素过氧化物酶（P<0.05）。本研究为选择合适培养基以提高花脸香蘑生物转化效率提供了理论基础。