Gathering Local Knowledge in Madagascar Results in a Major Increase in the Known Range and Number of Sites for Critically Endangered Greater Bamboo Lemurs (Prolemur simus)

Greater bamboo lemurs (Prolemur simus) are endemic to Madagascar and are the only recognized species within their genus. The IUCN lists the species as critically endangered, with very few confirmed distribution records and <200 individuals known in the wild. With the aim of contributing to its conservation, we attempted to find previously unknown sites containing the species. Working closely with local communities, and basing our methodology on the gathering of local knowledge, we surveyed 44 sites in and around the Ankeniheny-Zahamena Corridor. We found evidence of the presence of Prolemur simus at 18 sites. We made direct sightings at 6 sites, of a total of 65 confirmed individuals, and identified their characteristic feeding remains at the other sites. Twelve of the sites are located in midaltitude rain forest within the corridor, and 6 lie in isolated and degraded lowland areas outside the corridor. These discoveries more than double the number of sites where the species is known to occur, and extend its known range 85 km further north. We identified numerous threats to the newly discovered sites, including hunting pressure, habitat destruction, habitat disturbance, and habitat fragmentation. Demographic factors related to small population sizes and population isolation may also impact the viability of the populations. Our results illustrate the benefits of systematic gathering of local knowledge when searching for rare or secretive primates.     

The role of livestock movements in the spread of Rift Valley fever virus in animals and humans in Mayotte, 2018–19

Rift Valley fever (RVF) is a vector-borne viral disease of major animal and public health importance. In 2018–19, it caused an epidemic in both livestock and human populations of the island of Mayotte. Using Bayesian modelling approaches, we assessed the spatio-temporal pattern of RVF virus (RVFV) infection in livestock and human populations across the island, and factors shaping it. First, we assessed if (i) livestock movements, (ii) spatial proximity from communes with infected animals, and (iii) livestock density were associated with the temporal sequence of RVFV introduction into Mayotte communes’ livestock populations. Second, we assessed whether the rate of human infection was associated with (a) spatial proximity from and (b) livestock density of communes with infected animals. Our analyses showed that the temporal sequence of RVFV introduction into communes’ livestock populations was associated with livestock movements and spatial proximity from communes with infected animals, with livestock movements being associated with the best model fit. Moreover, the pattern of human cases was associated with their spatial proximity from communes with infected animals, with the risk of human infection sharply increasing if livestock in the same or close communes were infected. This study highlights the importance of understanding livestock movement networks in informing the design of risk-based RVF surveillance programs.     

Parasexuality in Race 65 Colletotrichum lindemuthianum Isolates

ABSTRACT. Heterokaryosis is the initial step of the parasexual cycle, a process that provides genetic variability in filamentous fungi through the production of heterozygous diploid nuclei. To characterize the parasexual cycle in Colletotrichum lindemuthianum, we evaluated the presence of heterokaryosis, vegetative compatibility reactions, and diploid formation among isolates of Race 65 collected from different Brazilian states. Vegetative compatibility groups were identified among the isolates according to their ability to form heterokaryons. Two heterozygous diploids were selected from compatible heterokaryons, which were characterized by the segregation of the parental auxotrophic markers and by RAPD profiles.     

CD14 C-159T and early infection with Pseudomonas aeruginosa in children with cystic fibrosis

Early acquisition of Pseudomonas aeruginosa is associated with a poorer prognosis in patients with cystic fibrosis. We investigated whether polymorphisms in CD14, the lipopolysaccharide receptor, increase the risk of early infection. Forty-five children with cystic fibrosis were investigated with annual bronchoalveolar lavage (BAL) and plasma sCD14 levels. Plasma sCD14 levels were significantly lower in children from whom P.aeruginosa was subsequently isolated (492.75 μg/ml vs. 1339.43 μg/ml, p = 0.018). Those with the CD14 -159CC genotype had a significantly increased risk of early infection with P.aeruginosa suggesting that CD14 C-159T plays a role in determining the risk of early infection with P.aeruginosa.     

Transcriptomic response to differentiation induction

Background  

Microarrays used for gene expression studies yield large amounts of data. The processing of such data typically leads to lists of differentially-regulated genes. A common terminal data analysis step is to map pathways of potentially interrelated genes.