Genetic map of Triticum turgidum based on a hexaploid wheat population without genetic recombination for D genome

ABSTRACT: BACKGROUND: A synthetic doubled-haploid hexaploid wheat population, SynDH1, derived from the spontaneous chromosome doubling of triploid F1 hybrid plants obtained from the cross of hybrids Triticum turgidum ssp. durum line Langdon (LDN) and ssp. turgidum line AS313, with Aegilops tauschii ssp. tauschii accession AS60, was previously constructed. SynDH1 is a tetraploidization-hexaploid doubled haploid (DH) population because it contains recombinant A and B chromosomes from two different T. turgidum genotypes, while all the D chromosomes from Ae. tauschii are homogenous across the whole population. This paper reports the construction of a genetic map using this population. RESULTS: Of the 606 markers used to assemble the genetic map, 588 (97%) were assigned to linkage groups. These included 513 Diversity Arrays Technology (DArT) markers, 72 simple sequence repeat (SSR), one insertion site-based polymorphism (ISBP), and two high-molecular-weight glutenin subunit (HMW-GS) markers. These markers were assigned to the 14 chromosomes, covering 2048.79 cM, with a mean distance of 3.48 cM between adjacent markers. This map showed good coverage of the A and B genome chromosomes, apart from 3A, 5A, 6A, and 4B. Compared with previously reported maps, most shared markers showed highly consistent orders. This map was successfully used to identify five quantitative trait loci (QTL), including two for spikelet number on chromosomes 7A and 5B, two for spike length on 7A and 3B, and one for 1000-grain weight on 4B. However, differences in crossability QTL between the two T. turgidum parents may explain the segregation distortion regions on chromosomes 1A, 3B, and 6B. CONCLUSIONS: A genetic map of T. turgidum including 588 markers was constructed using a synthetic doubled haploid (SynDH) hexaploid wheat population. Five QTLs for three agronomic traits were identified from this population. However, more markers are needed to increase the density and resolution of this map in the future study.     

p16在HBsAg和HBx转基因小鼠肝脏肿瘤中的表达

目的:探讨p16基因在由乙型肝炎病毒基因整合引起的小鼠肝细胞癌发生发展中的表达变化规律。方法:以乙肝病毒表面抗原基因(HBsAg)及X基因(HBx)定位整合转基因小鼠及对照小鼠的肝脏组织为标本,利用North-ern印迹、Western印迹及免疫组织化学检测p16在乙肝病毒基因定位整合转基因小鼠肝脏正常组织与肿瘤组织中的差异表达。结果:p16主要在小鼠胚胎期的肝脏中表达,在新生小鼠和成年小鼠的肝脏组织中几乎检测不到其表达;在HBsAg转基因小鼠和HBx转基因小鼠的肝脏肿瘤中,p16的表达明显升高。结论:p16基因在HBsAg或HBx诱导的肝细胞癌发生过程中被重新激活,也许发挥重要的作用。     

接头蛋白Gab1的结构及功能研究进展

Gab1蛋白属于接头蛋白Gab家族,该家族蛋白因能与生长因子受体结合蛋白2（Grb2）相结合而得名。作为接头蛋白,Gab1蛋白能被多种受体酪氨酸激酶或非受体酪氨酸激酶激活,接受胞外多种生长因子、细胞因子和一些T/B细胞抗原受体的刺激,介导PI3K/Akt和Ras/MAPK等多条信号转导途径,具有促进细胞生长、迁移、调节免疫等多种生物学功能,与糖尿病、肿瘤、心血管疾病等的发生发展密切相关。     

螯合剂对重金属超量积累植物Thlaspi caerulescens的锌、铜、锰和铁吸收的影响

由螯合剂EDTA和DTPA对重金属超量积累植物Thlaspicaerulescens吸收Zn、Cu、Mn、Fe和P的影响表明：营养液含Zn10μnol／L几条件下,植株地上部全Zn含量和根系吸Zn速率分别达到1681mgkg-1干重和448mgkg-1根干重d－1;43．2μmol／L的EDTA或DTPA处理显著抑制植株的生长,也减少植株单位根重吸收的Zn量,降低地上部和根系全Zn、全Cu、全Mn含量和可溶态含量,增加地上部的全Fe和全P含量;所有处理中地上部全Zn和可溶态Zn含量均明显高于根系,说明T．caerulescens吸收的Zn大部分运向地上部。与Fe（Ⅲ）EDTA处理相比,Fe（Ⅲ）EDDHA处理植株的单位很重吸收Zn总量和地上部全Zn含量均较高。     

国产蕺菜的染色体数目变异及核穿壁现象

蕺菜 Houttuynia cordata Thunb.属三白草科蕺菜属,俗称鱼腥草、侧耳根等,主要分 布于 亚洲东部和东南部,我国以长江流域及其以南各省区常见。蕺菜药蔬兼用,为极具开发前景 的植物资源。部分学者曾对蕺菜染色体数目进行过报道,但报道的染色体数目不尽一致（梁汉兴,1991,1995; Hsu,1968; Nilsamranchit et al, 1999）,并且对此 现象未作较为详细而深入的解释。本文对国内部分省区收集的蕺菜种质资源进行染色体数目分析,旨在从细胞学角度探讨蕺菜的遗传多样性,为     

盐胁迫下水稻叶绿体中Na+、Cl-积累导致叶片净光合速率下降

研究了0-200mmol/L的NaCl胁迫下耐盐性不同的水稻品种Pokkali(耐盐）和Peta(盐敏感）根系,叶片和叶绿体中Na^ ,K^ 和Cl^-含量的变化及其与叶片光合作用的关系。结果表明：随着NaCl胁迫时间和浓度的增加,供试2个品种在根,叶片和叶绿体中Na^ ,Cl^－含量增加,K^ 含量下降。耐盐品种体内Na^ ,Cl^－含量增加或K^ 含量减少的幅度小于盐敏感品种。在200mmol/L的NaCl胁迫下盐敏感品种根,叶片和叶绿体中的Na^ /K^ 分别是耐盐品种的208％,308％和297％。与Na^ 相比,耐盐品种根系对K^ 吸收和向叶片运输的选择性（SK,Na)较强。但在经过0,100和200mmol/L的NaCl处理后2个品种叶绿体中的Na^ /K^ 均高于叶片（SK,Na均小于1）。盐胁迫下水稻叶绿体中Na^ ,Cl^-含量和Na^ /K^ 与叶片净光合速度呈极显著负相关。     

Prediction of protein-protein interactions between Ralstonia solanacearum and Arabidopsis thaliana

Ralstonia solanacearum is a devastating bacterial pathogen that has an unusually wide host range. R. solanacearum, together with Arabidopsis thaliana, has become a model system for studying the molecular basis of plant-pathogen interactions. Protein-protein interactions (PPIs) play a critical role in the infection process, and some PPIs can initiate a plant defense response. However, experimental investigations have rarely addressed such PPIs. Using two computational methods, the interolog and the domain-based methods, we predicted 3,074 potential PPIs between 119 R. solanacearum and 1,442 A. thaliana proteins. Interestingly, we found that the potential pathogen-targeted proteins are more important in the A. thaliana PPI network. To facilitate further studies, all predicted PPI data were compiled into a database server called PPIRA (http://protein.cau.edu.cn/ppira/). We hope that our work will provide new insights for future research addressing the pathogenesis of R. solanacearum.     

Identification, localization, and characterization of putative USP genes in barley

The universal stress proteins (USPs) play an important role in enhancing survival rate during prolonged exposure to heat shock, nutrient starvation, or stressors from agents that arrest cell growth or damage DNA structures. Searching the HarvEST database of barley resulted in 25 putative USP cDNA sequences. Of these, 16 could translate into intact proteins (putative USPs). The alignments of multiple amino acid sequences between the putative barley USPs with those of Arabidopsis and Methanococcus jannaschii resulted in a set of common residues involved in ATP-binding. The 16 putative USPs in barley and the 21 in Arabidopsis were clustered into seven groups, which were distinct from those of E. coli. The genes in these different groups have different intron/exon structures. Nine putative USP genes of barley were cloned successfully based on their sequence characteristics, and they contain two or three introns each. Two of these introns were present in all the genes, one located between β2 and α2, and the other between β4 and α4. Five sets of primers were successfully developed for these putative USP genes. Two of them were mapped on chromosome 1H and the other three were located on three different chromosomes, 2H, 3H and 6H, respectively. Expression analyses were carried out for nine of these putative USP genes. The expression for two of them was undetectable within 27 h following exposure to salt stress. Six of the other seven were expressed in both root and leaf, and the remaining one was expressed in root only. The majority of these genes was expressed more in the salt-sensitive variety, Morex, than in the more tolerant variety, Steptoe.     

Sequence-related amplified polymorphism (SRAP) of wild emmer wheat (Triticum dicoccoides) in Israel and its ecological association

Genetic diversity and population structure of 15 wild emmer wheat (Triticum dicoccoides) populations from Israel were detected by 30 sequence-related amplified polymorphism (SRAP) primer pairs. Two hundred and forty four fragments out of 438 were polymorphic. The proportion of polymorphic loci (P), the genetic diversity (He), and Shannon's information index were 0.557, 0.198, and 0.295, respectively. The population Amirim had the highest genetic variation, whereas the population of Tabigha had the lowest genetic variation. The hierarchical analysis of molecular variance (AMOVA) revealed that most of the variation was presented within populations. The value of genetic distance (D) between the populations varied from 0.027 to 0.165 with an average of 0.079, and the estimates of genetic distance were geographically independent based on the Mantel test (r = 0.105, P = 0.168). A total of 30 significant (P < 0.05) correlations were detected between 14 SRAP loci and 12 ecogeographic factors.