Hemicellulose modification promotes cadmium hyperaccumulation by decreasing its retention on roots in Sedum alfredii

Plant and Soil - Plant growth in the Arctic is often nutrient limited due to temperature constraints on decomposition and low atmospheric input of nitrogen (N). Local hotspots of nutrient...     

Predicting protein subcellular localization by pseudo amino acid composition with a segment-weighted and features-combined approach

Information of protein subcellular location plays an important role in molecular cell biology. Prediction of the subcellular location of proteins will help to understand their functions and interactions. In this paper, a different mode of pseudo amino acid composition was proposed to represent protein samples for predicting their subcellular localization via the following procedures: based on the optimal splice site of each protein sequence, we divided a sequence into sorting signal part and mature protein part, and extracted sequence features from each part separately. Then, the combined features were fed into the SVM classifier to perform the prediction. By the jackknife test on a benchmark dataset in which none of proteins included has more than 90% pairwise sequence identity to any other, the overall accuracies achieved by the method are 94.5% and 90.3% for prokaryotic and eukaryotic proteins, respectively. The results indicate that the prediction quality by our method is quite satisfactory. It is anticipated that the current method may serve as an alternative approach to the existing prediction methods.     

Metabolic engineering of Clostridium cellulolyticum for production of isobutanol from cellulose

Producing biofuels directly from cellulose, known as consolidated bioprocessing, is believed to reduce costs substantially compared to a process in which cellulose degradation and fermentation to fuel are accomplished in separate steps. Here we present a metabolic engineering example for the development of a Clostridium cellulolyticum strain for isobutanol synthesis directly from cellulose. This strategy exploits the host's natural cellulolytic activity and the amino acid biosynthesis pathway and diverts its 2-keto acid intermediates toward alcohol synthesis. Specifically, we have demonstrated the first production of isobutanol to approximately 660 mg/liter from crystalline cellulose by using this microorganism.     

基于“潜力-弹性-稳定性”模型的温州市生态韧性时空变化及影响因素研究

城市生态韧性为城市应对长期发展积累的内在压力,以及外界不确定性风险的冲击提供了新思路,对城市的可持续发展具有重要意义。基于城市生态学视角,从生态韧性的抵御力、恢复力及适应力三个方面特性,构建基于"潜力-弹性-稳定性"的生态韧性评价模型,分析了1990-2020年温州市生态韧性时空变化特征,并运用时空地理加权回归模型(GTWR),探究了生态韧性影响因素的时空异质性。结果表明:(1)1990-2020年,温州城市生态韧性指数总体呈现先上升后下降的趋势,潜力、弹性、稳定性呈现出相似的变化趋势,研究后期稳定性的提升使生态韧性的下降得到短暂缓解。(2)温州市东部沿海地区生态韧性较差,西部与北部山地生态韧性较好;低韧性水平区呈现出区域中心韧性水平降低,并且向外围扩张的趋势。(3)温州市城市生态韧性影响因素之间存在显著的时空差异,空间上也存在波动方向与强度的差异,这种差异性集中分布于城市边缘县(区)。研究以期为温州市及沿海同等级城市,提升城市生态韧性、促进区域可持续发展决策提供参考。     

张广才岭南部东北虎猎物种群冬季营养容纳量研究

猎物匮乏是影响东北虎（Panthera tigris altaica）种群恢复的关键因素之一。容纳量研究是开展东北虎猎物恢复工作的必要前提。通过Maxent模型、聚类分析和训练随机树分类等方法,结合调查数据,预测了吉林省张广才岭南部黄泥河林业局东北虎主要猎物的适宜栖息地空间分布,解译了植被类型,在此基础上基于不同植被类型动物可采食部分代谢能、不同生境等级食物可利用率、马鹿（Cervus elaphus）和狍（Capreolus capreolus）生境等级重叠情况以及动物冬季能量需求,分析了东北虎猎物的冬季营养容纳量。结果表明：黄泥河林业局狍、野猪（Sus scrofa）和马鹿的适宜栖息地分别占研究区域总面积的52.8%、40.7%和25.4%;从猎物获取能量来看,以山杨（Populus davidiana）、桦树（Betula）、核桃楸（Juglans mandshurica）为主的植被类型是马鹿、狍可获得能量较多的生境,以蒙古栎（Quercus mongolica）、核桃楸为主的植被类型是野猪可获得能量较多的生境。东北虎猎物种群的综合冬季营养容纳量为574只马鹿（0.29只/km²）,7016只狍（3.54只/km²）,4785只野猪（2.38只/km²）。     

湖北五峰后河国家级自然保护区鸟类多样性

为了解湖北五峰后河国家级自然保护区(以下简称后河保护区)鸟类物种多样性及其区系组成的变化, 我们通过样线、红外相机调查和检索文献资料相结合的方法获得了后河保护区鸟类名录, 并将其与后河保护区1999年科学考察结果进行对比分析。本研究于2017-2019年共在后河保护区内设置了82 km的鸟类调查样线, 共在309个位点上放置了红外相机, 累计99,586个相机日。我们用“后河” “鸟类” “湖北省”等关键词搜索相关出版物, 并查阅中国观鸟记录中心经审核后发布的鸟类信息, 结合样线和红外相机调查结果形成后河保护区鸟类名录。共整理得到后河保护区鸟类255种, 隶属于16目55科。其中, 国家I级重点保护野生鸟类2种, 包括中华秋沙鸭(Mergus squamatus)和金雕(Aquila chrysaetos); 国家II级重点保护野生鸟类46种, 包括红腹角雉(Tragopan temminckii)、棉凫(Nettapus coromandelianus)、松雀鹰(Accipiter virgatus)、灰林鸮(Strix aluco)、蓝鹀(Emberiza siemsseni)等。此外, 后河保护区有11种中国特有鸟类, 占我国特有鸟类种数(n = 93)的11.83%。在区系成分上, 后河保护区鸟类以东洋种为主(151种, 占59.22%), 其次为广布种(55种, 占21.57%)。与1999年科学考察结果相比, 鸟类增加了116种, 其中有15种国家重点保护野生鸟类。在区系组成上, 后河保护区内东洋种占比增加, 包括分布区向北扩散的物种成分。此外, 本次调查未记录到20世纪在保护区内有分布的白冠长尾雉(Syrmaticus reevesii)和海南鳽(Gorsachius magnificus)。本研究表明, 后河保护区鸟类物种多样性高、特有种及珍稀濒危物种丰富, 具有极高的保护价值和意义。通过对比分析后河保护区内野生鸟类动态变化, 可为保护区生物多样性监测方案设计和保护对策的制定提供科学依据。