丘塘景观土壤养分的空间变异

理解土壤养分空间分布的异质性对于评价和管理土地资源具有重要意义。利用地理信息系统和地统计学方法定量研究了丘塘景观土壤养分的空间异质性特征。结果表明 ,土壤全氮的有效变程最大 (为 16 5 m) ,有机碳次之 (10 2 m) ,而全磷的变程最小(90 m)。土壤有机碳含量由高到低 5个不同级别的土壤面积与丘塘景观整个面积的比值的变化范围较小 (10 .5 4 %～ 2 3.15 % ) ,土壤全氮含量比值变化范围较大 (5 .79%～ 32 .73% ) ,土壤全磷的比值的变化范围最大 (1.80 %～ 4 2 .0 6 % )。土壤有机碳和土壤全氮的分布情况较为一致 ,不同级别斑块分布也很相似 ,土壤有机碳含量高的地方土壤全氮也高。表层土壤有机碳和全磷的空间异质分布用球状模型拟合最佳 ,而全氮的空间分布规律更宜用指数模型来拟合。景观尺度的半方差拟合总体上优于斑块尺度。相对有机碳和全氮 ,全磷的空间异质性更多由随机因素 (如人类施肥活动 )引起和决定。土壤全氮的取样尺度应大于 16 5 m,而有机碳、全磷的取样距离则分别可大于 10 3m和 90 m。     

土壤微生物网络复杂性预测黄土高原造林恢复生态系统多功能性

人类活动导致黄土高原土地退化和生物多样性丧失,进而降低了生态系统功能。人工造林是该区域退化土地恢复的重要措施。现有的生态修复研究通常侧重于微生物群落物种多样性的恢复对单一生态系统功能的影响,而忽略了微生物间存在的相互作用与生态系统多功能性(Ecosystem multifunctionality, EMF)的关系。为探究造林恢复过程中土壤微生物多样性和网络复杂性与EMF的关系,本研究采用时空代换法(space-time substitution method),沿50年造林恢复时间序列,分析了黄土高原地区造林恢复对土壤微生物群落多样性、土壤微生物网络复杂性以及与土壤养分循环相关的10个生态系统功能指标的影响,明确了土壤微生物群落特征与EMF的关系。结果表明,随造林恢复时间序列的增加,土壤微生物群落的综合多样性、网络复杂性和EMF均呈现出显著增加后下降的趋势(P<0.05),其中土壤微生物综合多样性和网络复杂性在第8年达到最高值,EMF在第20年达到最大值。在未控制土壤环境因素时,细菌和古菌多样性与EMF无显著相关性,真菌多样性与EMF呈显著正相关(P<0.001);土壤微生...     

The U-Box E3 Ubiquitin Ligase TUD1 Functions with a Heterotrimeric G α Subunit to Regulate Brassinosteroid-Mediated Growth in Rice

Heterotrimeric G proteins are an important group of signaling molecules found in eukaryotes. They function with G-protein-coupled-receptors (GPCRs) to transduce various signals such as steroid hormones in animals. Nevertheless, their functions in plants are not well-defined. Previous studies suggested that the heterotrimeric G protein α subunit known as D1/RGA1 in rice is involved in a phytohormone gibberellin-mediated signaling pathway. Evidence also implicates D1 in the action of a second phytohormone Brassinosteroid (BR) and its pathway. However, it is unclear how D1 functions in this pathway, because so far no partner has been identified to act with D1. In this study, we report a D1 genetic interactor Taihu Dwarf1 (TUD1) that encodes a functional U-box E3 ubiquitin ligase. Genetic, phenotypic, and physiological analyses have shown that tud1 is epistatic to d1 and is less sensitive to BR treatment. Histological observations showed that the dwarf phenotype of tud1 is mainly due to decreased cell proliferation and disorganized cell files in aerial organs. Furthermore, we found that D1 directly interacts with TUD1. Taken together, these results demonstrate that D1 and TUD1 act together to mediate a BR-signaling pathway. This supports the idea that a D1-mediated BR signaling pathway occurs in rice to affect plant growth and development.     

Effect of polyelectrolyte adsorption on lateral distribution and dynamics of anionic lipids: a Monte Carlo study of a coarse-grain model

We employ Monte Carlo simulations to investigate the interaction between an adsorbing linear flexible cationic polyelectrolyte and a ternary mixed fluid membrane containing neutral (phosphatidylcholine, PC), monovalent (phosphatidylserine, PS), and multivalent (phosphatidylinositol, PIP₂) anionic lipids. We systematically explore the influences of polyelectrolyte chain length, polyelectrolyte charge density, polyelectrolyte total charge amount, and salt solution ionic strength on the static and dynamic properties of different anionic lipid species. Our results show that the multivalent PIP₂ lipids dominate the polyelectrolyte–membrane interaction and competitively inhibit polyelectrolyte–PS binding. When the total charge amount of the polyelectrolyte is less than that of the local oppositely charged PIP₂ lipids, the polyelectrolyte can drag the bound multivalent lipids to diffuse on the membrane, but cannot interact with the PS lipids. Under this condition, the diffusion behaviors of the polyelectrolyte closely follow the prediction of the Rouse model, and the polyelectrolyte chain properties determine the adsorption amount, concentration gradients, and hierarchical mobility of the bound PIP₂ lipids. However, when the total charge amount of the polyelectrolyte is larger than that of the local PIP₂ lipids, the polyelectrolyte further binds the PS lipids around the polyelectrolyte–PIP₂ complex to achieve local electrical neutrality. In this condition, parts of the polyelectrolyte desorb from the membrane and show faster mobility, and the bound PS presents much faster mobility than the segregated PIP₂. This work provides an explanation for heterogeneity formation in different anionic lipids induced by polyelectrolyte adsorption.     

Structural and transcriptional analysis of<Emphasis Type="Italic"> S</Emphasis>-locus F-box genes in<Emphasis Type="Italic"> Antirrhinum</Emphasis>

A class of ribonucleases termed S-RNases, which control the pistil expression of self-incompatibility, represents the only known functional products encoded by the S locus in species from the Solanaceae, Scrophulariaceae and Rosaceae. Previously, we identified a pollen-specific F-box gene, AhSLF (S locus F-box)-S₂, very similar to S₂-RNase in Antirrhinum, a member of the Scrophulariaceae. In addition, AhSLF-S₂ also detected the presence of its homologous DNA fragments. To identify these fragments, we constructed two genomic DNA libraries from Antirrhinum self-incompatible lines carrying alleles S₁S₅ and S₂S₄, respectively, using a transformation-competent artificial chromosome (TAC) vector. With AhSLF-S₂-specific primers, TAC clones containing both AhSLF-S₂ and its homologs were subsequently identified (S₂TAC, S₅TACa, S₄TAC, and S₁TACa). DNA blot hybridization, sequencing and segregation analyses revealed that they are organized as single allelic copies (AhSLF-S₂, -S₁, -S₄ and -S₅) tightly linked to the S-RNases. Furthermore, clusters of F-box genes similar to AhSLF-S₂ were identified. In total, three F-box genes (AhSLF-S₂, -S₂A and -S₂C) in S₂TAC (51 kb), three (AhSLF-S₄, -S₄A and -S₄D) in S₄TAC (75 kb), two (AhSLF-S₅ and -S₅A) in S₅TACa (55 kb), and two (AhSLF-S₁ and -S₁E) in S₁TACa (71 kb), respectively, were identified. Paralogous copies of these genes show 38–54% identity, with allelic copies sharing 90% amino acid identity. Among these genes, three (AhSLF-S₂C, -S₄D and -S₁E) were specifically expressed in pollen, similar to AhSLF-S₂, implying that they likely play important roles in pollen, whereas three AhSLF-SA alleles showed no detectable expression. In addition, several types of retroelements and transposons were identified in the sequenced regions, revealing some detailed information on the structural diversity of the S locus region. Taken together, these results indicate that both single allelic and tandemly duplicated genes are associated with the S locus in Antirrhinum. The implications of these findings in evolution and possible roles of allelic AhSLF-S genes in the self-incompatible reaction are discussed in species like Antirrhinum.Sequence data from this article have been deposited with the EMBL/GenBank databases under accession numbers AJ300474, AJ515534, AJ515536 and AJ515535     

Identification, Expression and Functional Analysis of a Receptor-like Cytoplasmic Kinase, OsRLCK1, in Rice

Pollination involves a series of complex cellular interactions and signal transduction events. Numerous reports have suggested a central role for protein kinases in pollen germination and pollen tube growth and a large number of receptor-like kinases have been detected exclusively in pollen in higher plants. However, few are well characterized, especially for the receptor-like cytoplasmic kinases. Here we report a receptor-like kinase gene, OsRLCK1, which belongs to the receptor-like cytoplasmic kinase Ⅷ subfamily. Real-time quantitative polymerase chain reaction analysis and whole mount RNA in situ hybridization showed that OsRLCK1 is a pollen-specific gene and expressed only in the mature pollen. When expressed in the onion epidermal cells, the OsRLCK1-GFP fusion protein was diffused throughout the cell, indicating its cytoplasmic and nuclear localization. The Maltose Binding Protein-OsRLCK1 recombinant protein was found to be capable of autophosphorylation on threonine residue, showing that it encodes a functional kinase. These results suggest that OsRLCK1 is likely to play a role in a signaling pathway associated with pollen performance during pollination in rice.     

景观生态学与退化生态系统恢复

退化生态系统的恢复是一项艰巨任务,它需要考虑到所要恢复的退化生态系统的结构,多样性和其动态的整体性和长期性。现在对于退化生态系统恢复研究已经要使生态学家们关注受损生态系统的理论和实际问题。退化生态系统恢复所面临的挑战是理解和利用生态演替理论来完成并加速恢复进程。恢复的主要目标是建立一个自维持的,由不同的群落或生态系统组成的能够满足不同需要如生物保护和粮食生产需要的景观。景观生态学关注于大的空间尺度的生态学问题。景观生态学研究方法可以为退化生态系统恢复实践提供指导。在解决退化生态系统的恢复问题时,景观生态学的方法在理论和实践上是有效的。景观生态学中的核心概念和其一般原理斑块形状、生态系统间相互作用、镶嵌系列等都同退化生态系统的恢复有着密切的关系。如恢复地点的选择和适当的恢复要素的空间配置。在评价退化生态系统的恢复是否取得成功,利用景观生态学也具有重要的意义。景观生态学理论如景观格局与景观异质性理论,干扰理论和尺度理论都能够指导退化生态系统的恢复实践。同样地,退化生态系统的恢复可以为景观生态学的研究提供非常恰当的实验场。寓景观生态学思想于退化生态系统恢复过程是一种新的有效途径。     

Association of SERPINE2 gene with the risk of chronic obstructive pulmonary disease and spirometric phenotypes in northern Han Chinese population

Chronic obstructive pulmonary disease (COPD) is a complex human disease influenced by multiple genes and environmental factors. The SERPINE2 gene has recently been demonstrated to be associated with COPD onset in a non-East Asian population. In this study, we genotyped 20 single nucleotide polymorphisms (SNPs) in SERPINE2 from 310 cases and 203 controls, all of which belong to the Han from North China. Genotype frequencies were compared between the cases and the controls and analyzed for statistical significance. Two SNPs (rs729631 and rs975278), which are in strong linkage disequilibrium (LD) and locate in block 1 on the LD map of our samples, showed significant association both with the risk of COPD and decline in baseline lung function after Bonferroni correction (P < 0.05). This study provides further evidences for SERPINE2 gene as a COPD susceptible gene, and block 1 of SERPINE2 appears to be the genetic variant region that affects the Han Chinese.