Variable coordination of cotranscribed genes in Escherichia coli following antisense repression

Background  

A majority of bacterial genes belong to tight clusters and operons, which complicates gene functional studies using conventional knock-out methods. Antisense agents can down-regulate the expression of genes without disrupting the genome because they bind mRNA and block its expression. However, it is unclear how antisense inhibition affects expression from genes that are cotranscribed with the target.     

Spatio-temporal kinematic analysis of shoot gravitropism in Arabidopsis thaliana

Plant shoots can bend upward against gravity, a behavior known as shoot gravitropism. The conventional quantification of shoot bending has been restricted to measurements of shoot tip angle, which cannot fully describe the spatio-temporal bending process. Recently, however, advanced imaging analyses have been developed to quantify in detail the spatio-temporal changes in inclination angle and curvature of the shoot. We used one such method (KymoRod) to analyze the gravitropism of the Arabidopsis thaliana inflorescence stem, and successfully extracted characteristics that capture when and where bending occurs. Furthermore, we implemented an elastic spring theoretical model and successfully determined best fitted parameters that may explain typical bending behaviors of the inflorescence stem. Overall, we propose a data-model combined framework to quantitatively investigate shoot gravitropism in plants.     

Stability in a class of discrete time models of interacting populations

Summary Effective Lyapunov and Lyapunov-like functions for a class of discrete time models of interacting populations are presented. These functions are constructed on the biologically meaningful principle that a viable population must absorb energy from external sources when its density is low and it must dissipate energy to the environment when its density is high. These functions can be used to establish that a discrete time model is globally stable or that its solutions are ultimately confined to an acceptable region of the state space. The latter is especially interesting when the model has chaotic solutions. These methods are applied to a single species model and a model of competition between two species.     

Modes of action of fraxinellone against the tobacco budworm, Heliothis virescens

Fraxinellone significantly reduced the relative growth rate, food consumption rate as well as the efficiency of conversion of ingested food into biomass of Heliothis virescens when incorporated into artificial diets at concentrations of 4.31 × 10⁻⁵ mol/L and above. After being fed with fraxinellone-treated diets for 24 h, the larval midguts of H. virescens possess significantly lower activities of α-amylase and non-specific proteases and higher activities of cytochrome P450s. In vitro , the compound did not inhibit the activities of α-amylase and non-specific proteases extracted from the larval midguts. Clear evidence of post-ingestive toxicity of fraxinellone to midgut cells was observed under an electron microscope. The modes of action of the compound against insects were discussed.     

Antidiabetic Medications for Type 2 Diabetics with Nonalcoholic Fatty Liver Disease: Evidence From a Network Meta-Analysis of Randomized Controlled Trials

ObjectiveType 2 diabetes mellitus and nonalcoholic fatty liver disease (NAFLD) are closely related, and antidiabetic medications have been shown to be potential therapeutics in NAFLD. Using a network meta-analysis, we sought to examine the effectiveness of antidiabetic agents for the treatment of NAFLD in patients with type 2 diabetes mellitus.MethodsMedline and Embase were searched for randomized controlled trials relating to the use of antidiabetic agents, including sodium-glucose transport protein 2 (SGLT2) inhibitors, glucagon-like peptide-1 receptor agonists, and peroxisome proliferator-activated receptor gamma (PPARγ) agonists, biguanides, sulfonylureas and insulin, on NAFLD in patients with diabetes. The p-score was used as a surrogate marker of effectiveness.ResultsA total of 14 articles were included in the analysis. PPARγ agonists were ranked as the best treatment in steatosis reduction, resulting in the greatest reduction of steatosis. There was statistical significance between PPARγ agonists [mean difference (MD): ?6.02%, confidence interval (CI): ?10.37% to ?1.67%] and SGLT2 inhibitors (MD: ?2.60%, CI: ?4.87% to ?0.33%) compared with standard of care for steatosis reduction. Compared with PPARγ agonists, SGLT2 inhibitors resulted in a statistical significant reduction in fibrosis (MD: ?0.06, CI: ?0.10 to ?0.02). Body mass index reduction was highest in SGLT2 inhibitors and glucagon-like peptide-1 receptor agonists. Additionally, SGLT2 inhibitors were ranked as the best treatment for increasing high-density lipoprotein and reducing low-density lipoprotein.ConclusionGlucagon-like peptide-1 receptor agonists and SGLT2 inhibitors were suitable alternatives for the treatment of NAFLD in those with type 2 diabetes mellitus with a reduction in body mass index, fibrosis, and steatosis. SGLT2 inhibitors also have the added benefit of lipid modulation.     

Auxin, Cytokinin and Ethylene Differentially Regulate Specific Developmental States Associated with Shoot Bud Morphogenesis in Leaf Tissues of Mangosteen (Garcinia mangostana L.) Cultured in Vitro

Hormonal regulation of de novo shoot bud formation in leaf explantsof mangosteen has been studied from a developmental perspective.This analysis indicates that at least three discrete, experimentallydistinguishable developmental states, namely, morphogenic competence,caulogenic determination and organ differentiation, were expressedduring shoot bud morphogenesis. The state of morphogenic competencein leaf tissues was expressed maximally between days 10 and12 of leaf development. Competent cells in explants requireda minimum of 6 days of BA treatment (20 µM) to becomecaulogenically determined. Such determined cells would continueshoot organogenesis on medium devoid of growth regulators. Delayingof BA exposure for as short as 2 days caused a dramatic declinein tissue competence. The state of competence and the processof caulogenic determination were adversely affected by IAA,but were insensitive to ethylene or its precursor, ACC. Shootbud differentiation was greatly enhanced by BA, but selectivelydelayed by ethylene. IAA also showed an inhibitory effect onshoot bud differentiation, but not mediated through ethylene.The distinct roles of auxin, cytokinin and ethylene on the regulationof shoot bud development in mangosteen leaf explants have beendiscussed on the basis of the current understanding of the conceptof tissue competence, determination and differentiation. (Received August 12, 1996; Accepted October 31, 1996)