钦州湾秋季和春季浮游动物分布特征及影响因素

为了解钦州湾浮游动物群落的时空分布特征及与主要环境因子的关系,于2014年10月和2015年3月进行了秋季和春季两航次的调查。结果表明:该海湾的浮游动物群落有明显的季节变化。秋季共鉴定出12类87种,其中优势种有太平洋纺锤水蚤(Acartia pacifica)、肥胖三角溞(Evadne tergestina)、亨生莹虾(Lucifer hanseni)、百陶箭虫(Sagitta bedoti)和长尾类幼虫(Macrura larvae);春季共鉴定出11类48种,优势种为中华哲水蚤(Calanus sinicus)和太平洋纺锤水蚤;秋季浮游动物的平均丰度、生物量和多样性指数(528.92个/m~3、110.60 mg/m~3和2.22)均高于春季(48.30个/m~3、61.10 mg/m~3和1.70)。空间分布上,钦州湾外湾浮游动物丰度、生物量和多样性指数的平均值皆高于内湾。多维尺度分析表明,秋季内湾群落相似性较高,春季外湾浮游动物群落相似性较高。相关性分析表明盐度与营养盐是影响钦州湾浮游动物分布的主要环境因子。与2011—2012年数据相比,钦州湾浮游动物群落结构已趋于单一化和小型化,以致生物量明显下降。这一现象主要与钦州湾海水富营养化以及大面积高密度牡蛎养殖有密切的关系。     

Eight SNPs of the Myf5 gene and diplotypes associated with growth and reproductive traits in Jinghai yellow chicken

The objective of this study was to analyze possible associations between single nucleotide polymorphisms (SNPs) in the Myf5 gene with chicken growth and reproductive traits. SNPs in Myf5 of the Jinghai yellow chicken were detected by the polymerase chain reaction single-strand conformation polymorphism method and the haplotypes were analyzed. Eight SNPs were identified in the exons of Myf5. Nine haplotypes were established in a group of 379 Jinghai yellow chickens. In terms of growth traits, least square analysis showed that haplotype H1H5 had significant effects on weight at weeks 8 and 12 (P < 0.05). Haplotype H2H6 had significant effects on weight at weeks 12 and 14 (P < 0.05). For reproductive traits, H1H5 had higher body weight for the first egg than H1H4 and H2H4 (P < 0.05), and H1H3 (P < 0.01). H1H3 had a poor performance in average egg weight at 300 days. On the other hand, H1H3 had an advantage in egg number at 300 days. The results showed that SNPs of Myf5 have certain effects on growth and reproductive traits in Jinghai yellow chickens, which can be used in marker-assisted selection to accelerate chicken genetic progress.     

芍药甘草汤及其活性成分的脑保护作用机制研究概述

芍药甘草汤由东汉张仲景创立,仅有芍药和甘草两味药物组成,具有调和肝脾,缓急止痛的功效,是经典的止痛方剂,临床主要用于血虚津伤所导致的各种内脏疼痛,腓肠肌痉挛的治疗中。已经展开的基础研究主要集中解痉、止痛和抗炎方面的机理研究。近年逐步认识到芍药甘草汤及其活性成分在神经保护领域的作用,在脑卒中、帕金森病、阿尔海默氏症、癫痫等中枢神经系统疾病基础研究中,取得成果。文章研读近年来国内外相关文献,分别从芍药、甘草的活性成份以及芍药甘草汤方剂在脑保护领域进行的基础研究的进展做一综述,显示了芍药甘草汤及其活性成分可以抑制脑组织免疫炎症反应、抑制氧化反应、抗谷氨酸毒性,改善脑血流、抗细胞凋亡和保护神经元的作用,阐述了芍药甘草汤的多途径、多靶点的药理优势及在脑保护领域的应用前景。     

Smac3, a novel Smac/DIABLO splicing variant, attenuates the stability and apoptosis-inhibiting activity of X-linked inhibitor of apoptosis protein

X-linked inhibitor of apoptosis protein (XIAP), the most potent member of the inhibitor of apoptosis protein (IAP) family, plays a crucial role in the regulation of apoptosis. XIAP is structurally characterized by three baculovirus IAP repeat (BIR) domains that mediate binding to and inhibition of caspases and a RING domain that confers ubiquitin ligase activity. The caspase inhibitory activity of XIAP can be eliminated by the second mitochondria-derived activator of caspases (Smac)/direct IAP-binding protein with low pI (DIABLO) during apoptosis. Here we report the identification and characterization of a novel isoform of Smac/DIABLO named Smac3, which is generated by alternative splicing of exon 4. Smac3 contains an NH2-terminal mitochondrial targeting sequence required for mitochondrial targeting of Smac3 and an IAP-binding motif essential for Smac3 binding to XIAP. Smac3 is released from mitochondria into the cytosol in response to apoptotic stimuli, where it interacts with the second and third BIR domains of XIAP. Smac3 disrupts processed caspase-9 binding to XIAP, promotes caspase-3 activation, and potentiates apoptosis. Strikingly, Smac3, but not Smac/DIABLO, accelerates XIAP auto-ubiquitination and destruction. Smac3-stimulated XIAP ubiquitination is contingent upon the physical association of XIAP with Smac3 and an intact RING domain of XIAP. Smac3-accelerated XIAP destabilization is, at least in part, attributed to its ability to enhance XIAP ubiquitination. Our study demonstrates that Smac3 is functionally additive to, but independent of, Smac/DIABLO.     

Microdissection and painting of the Y chromosome in spinach (Spinacia oleracea)

Spinach has long been used as a model for genetic and physiological studies of sex determination and expression. Although trisomic analysis from a cross between diploid and triploid plants identified the XY chromosome as the largest chromosome, no direct evidence has been provided to support this at the molecular level. In this study, the largest chromosomes of spinach from mitotic metaphase spreads were microdissected using glass needles. Degenerate oligonucleotide primed polymerase chain reaction was used to amplify the dissected chromosomes. The amplified products from the Y chromosome were identified using the male-specific marker T11A. For the first time, the largest spinach chromosome was confirmed to be a sex chromosome at the molecular level. PCR products from the isolated chromosomes were used in an in situ probe mixture for painting the Y chromosome. The fluorescence signals were mainly distributed on all chromosomes and four pair of weaker punctate fluorescence signal sites were observed on the terminal region of two pair of autosomes. These findings provide a foundation for the study of sex chromosome evolution in spinach.     

枫香叶片变色期全长转录组测序及分析

枫香因其树形优美,入秋后叶色红艳或橙黄,极具观赏价值,是优良的景观生态树种。为了解枫香叶片变色及其次级代谢过程的遗传基础,该文以枫香5个叶片变色期叶片混合样品为材料,利用单分子实时测序技术(PacBio平台)对其进行全长转录组测序。结果表明:(1)全长转录组测序共获得41.04 Gb的高质量数据,从中鉴定出全长非嵌合序列563 180条,通过聚类和去冗余,获得27 269条高质量全长转录本。在27 269条全长转录本中预测到2 035条长链非编码RNA(lncRNA),并检测出14 892个简单重复序列(SSR)位点和1 856个转录因子。(2)基因注释结果表明,NR、GO、COG、KEGG 等8个数据库共注释了24 857条转录本,KEGG数据库共获得了124个条代谢途径,主要有核糖体、碳代谢、氨基酸生物合成等,在类黄酮和叶绿素代谢途径中分别有49和71个转录本参与。上述结果初步揭示了枫香叶片变色期转录组信息以及功能特性,为后续研究枫香叶片变色分子机制、色素代谢合成途径和调控、相关功能基因克隆以及叶色改良提供基础数据。     

病原菌诱导型启动子顺式作用元件及其互作的转录因子

启动子是位于基因5′端上游的一段DNA序列, 负责调控基因的转录。与植物抗病相关基因的启动子区含有能针对病原菌胁迫做出应答的顺式作用元件, 这些顺式作用元件通过与转录因子特异性结合, 进而增强抗病基因的转录表达, 提高植物的抗病性。该文主要综述了病原菌诱导型启动子相关顺式作用元件及与这些元件互作的转录因子, 特别对一类特殊的转录因子--病原菌TAL效应子与植物靶基因启动子之间的相互作用机制进行了阐述, 并对其应用前景进行了展望。     

People’s desire to be in nature and how they experience it are partially heritable

Nature experiences have been linked to mental and physical health. Despite the importance of understanding what determines individual variation in nature experience, the role of genes has been overlooked. Here, using a twin design (TwinsUK, number of individuals = 2,306), we investigate the genetic and environmental contributions to a person’s nature orientation, opportunity (living in less urbanized areas), and different dimensions of nature experience (frequency and duration of public nature space visits and frequency and duration of garden visits). We estimate moderate heritability of nature orientation (46%) and nature experiences (48% for frequency of public nature space visits, 34% for frequency of garden visits, and 38% for duration of garden visits) and show their genetic components partially overlap. We also find that the environmental influences on nature experiences are moderated by the level of urbanization of the home district. Our study demonstrates genetic contributions to individuals’ nature experiences, opening a new dimension for the study of human–nature interactions.

Nature experiences have been linked to mental and physical health. This twin study reveals genetic influences on an individual’s orientation towards nature and nature experiences, opening a new dimension to understanding human-nature interactions.     

DNA分子量标准制备技术：方法与进展

DNA分子量标准是一组分子量大小已知的DNA片段混合物,用于指示核酸电泳中未知样品的分子量大小,从而帮助实验人员判断DNA样品的性质。因而DNA分子量标准成为目前分子生物学和基因工程领域不可或缺的一种电泳耗材。综述了目前各种DNA分子量标准产品的制备方法和技术原理及近年来该领域的一些技术进展情况。