Kinetic study on starch hydrolysis using a glucose/maltose sensing system

Summary A dual-enzyme electrode flow injection system that can simultaneously determine glucose and maltose is used for an on-line study of starch hydrolyses catalysed by amylases. With the working system, determinations can be made every 2 minutes. A 10 L sample size with recycled back-flow minimises any loss of the reaction medium. The production, growth and decay of glucose and maltose concentrations during starch hydrolysis under various enzymatic conditions can thus be closely monitored, making it useful for the study of the catalytic kinetics of amylases and in screening and analysing enzyme systems.     

Identification of an epithelial protein related to the desmosome and intermediate filament network

Using a mAb, referred to as 08L, we have identified a protein, of M(r) approximately 140,000, associated with desmosomes of epithelial cells. The 08L antibody stained the intracellular side of lateral cell margins of monolayer epithelial cells but did not stain cell margins free of cell contact. Immunoelectron microscopy revealed that the 08L antigen was localized to the cytosolic surface of the desmosomal plaque near points of intermediate filament convergence with apparently little staining of the desmosomal plaque proper. Western blots revealed the 08L antigen to be a protein, of M(r) approximately 140,000, found in the Triton-X 100 insoluble pellet. High salt-containing buffers extracted the 08L antigen from the insoluble material. Examination of the assembly of 08L to the desmosome complex, in cells grown in low confluent culture or in calcium-switch assays, by double immunofluorescence with 08L and anti-desmoplakin antibody, revealed that 08L was recruited to morphologically identifiable desmosomes. 08L antigen may exist in a cytosolic pool prior to assembly to the cell surface. The solubility of 08L in low calcium and normal calcium conditions, however, was similar. 08L association to the desmosome was correlated with increased organization of the intermediate filament network. We suggest that the 08L antigen may be involved in the organization and stabilization of the desmosome-IF complexes of epithelia.     

Mechanism of action of the antiplatelet peptide, arietin, from Bitis arietans venom

Arietin, an Arg-Gly-Asp containing peptide from venom of Bitis arietans, inhibited aggregation of platelets stimulated by a variety of agonists with a similar IC50, 1.3-2.7.10(-7) M. It blocked aggregation through the interference of fibrinogen binding to fibrinogen receptors on platelet surface. In this paper, we further demonstrated that arietin had no significant effect on the intracellular mobilization of Ca2+ in Quin2-AM-loaded platelets stimulated by thrombin. It inhibited 125I-fibrinogen binding to ADP-stimulated platelets in a competitive manner (IC50, 1.1.10(-7) M). 125I-arietin bound to unstimulated, ADP-stimulated and elastase-treated platelets in a saturable manner and its Kd values were estimated to be 3.4.10(-7), 3.4.10(-8) and 6.5.10(-8) M, respectively, while the corresponding binding sites were 46,904, 48,958 and 34,817 per platelet, respectively. Arg-Gly-Asp-Ser (RGDS) inhibited 125I-arietin binding to ADP-stimulated platelets in a competitive manner. RGD-containing peptides, including trigramin and rhodostomin, EDTA and monoclonal antibody, 7E3, raised against glycoprotein IIb-IIIa complex, inhibited 125I-arietin binding to ADP-stimulated platelets, indicating that the binding sites of arietin appear to be located at or near glycoprotein IIb-IIIa complex. In conclusion, arietin and other RGD-containing trigramin-like peptides preferentially bind to the fibrinogen receptors associated with glycoprotein IIb-IIIa complex of the activated platelets, thus leading to the blockade of fibrinogen binding to its receptors and subsequent aggregation. The presence of RGD of arietin is essential for the expression of its biological activity. Its binding sites are overlapped with those of trigramin, rhodostomin and the monoclonal antibody, 7E3.     

2001-2019年台风干扰下我国东南沿海地区植被抵抗力和恢复力评估

台风是影响我国陆地生态系统结构和功能的主要自然灾害之一,尤其对东南沿海地区植被具有明显的干扰效应。为深入了解台风对我国沿海地区植被的影响及其响应,基于MODIS增强型植被指数(Enhanced Vegetation Index, EVI)和叶面积指数(Leaf Area Index, LAI),分析了2001-2019年间不同等级的台风对植被EVI和LAI的影响,评估台风登陆时植被的抵抗力及台风过后植被的恢复力。结果表明:(1)2001-2019年间,共有70个台风登陆我国东南沿海地区,其中,台风(TY)、强台风(STY)与超强台风(SuperTY)的数量分别为35、26和9个。我国台湾省的台风登陆次数最多,为26个,其次为广东省(20个);(2)在整个研究区范围内,台风(TY)、强台风(STY)与超强台风(SuperTY) 登陆后的EVI净变化率分别为4.88%、-7.48%、-1.85%,LAI净变化率分别为22.28%、-65.70%、-17.60%;(3)在经历台风干扰后,沿海地区大部分植被可在3个月之内得到恢复,其中浙江省与广东省植被的恢复时间较长,海南省与台湾省植被的恢复时间较短。研究结果对我国沿海地区森林经营管理和生态环境保护具有重要意义。     

可可西里地区藏羚的社群特征

藏羚(Pantholopshodgsoni)的集群类型有雌性群、雄性群、母仔群、雌雄混群和独羚5种形式。2002年7月～2003年12月,在可可西里地区沿青藏公路设立试验区,直接观察到936群次,计13795只次藏羚。藏羚的集群类型受到生育周期的影响,季节间差异显著。春季以雌性群(60.49%)和雄性群(30.86%)为主;夏季和秋季主要为雌性群(41.65%,49.66%)和母仔群(49.36%,33.67%);雌雄混群(58.14%)主要出现在冬季。雄性群在1年中很少见,尤其是夏秋两季,冬季较为常见,多由亚成体雄性组成。独羚是一种特殊的集群类型,占11.32%。常见的集群大小为2～20只,占71.90%,其次是21～200只的群,占16.35%;>200只的集群极少,仅占0.43%,且仅出现于夏季产羔往返迁徙途中。藏羚的集群大小受竞争、捕食风险以及迁徙繁殖的共同影响。藏羚的集群极不稳定,交配期雌雄混合群受雄性亚成体的干扰经常改变,而在迁徙季节大群和小群之间的转换也很频繁。大型集群为雌性群或母仔群,其最适集群大小为2～20只。     

Modeling activity patterns of wildlife using time‐series analysis

The study of wildlife activity patterns is an effective approach to understanding fundamental ecological and evolutionary processes. However, traditional statistical approaches used to conduct quantitative analysis have thus far had limited success in revealing underlying mechanisms driving activity patterns. Here, we combine wavelet analysis, a type of frequency‐based time‐series analysis, with high‐resolution activity data from accelerometers embedded in GPS collars to explore the effects of internal states (e.g., pregnancy) and external factors (e.g., seasonal dynamics of resources and weather) on activity patterns of the endangered giant panda (Ailuropoda melanoleuca). Giant pandas exhibited higher frequency cycles during the winter when resources (e.g., water and forage) were relatively poor, as well as during spring, which includes the giant panda's mating season. During the summer and autumn when resources were abundant, pandas exhibited a regular activity pattern with activity peaks every 24 hr. A pregnant individual showed distinct differences in her activity pattern from other giant pandas for several months following parturition. These results indicate that animals adjust activity cycles to adapt to seasonal variation of the resources and unique physiological periods. Wavelet coherency analysis also verified the synchronization of giant panda activity level with air temperature and solar radiation at the 24‐hr band. Our study also shows that wavelet analysis is an effective tool for analyzing high‐resolution activity pattern data and its relationship to internal and external states, an approach that has the potential to inform wildlife conservation and management across species.     

Theoretical Insights into Catalytic Mechanism of Protein Arginine Methyltransferase 1

Protein arginine methyltransferase 1 (PRMT1), the major arginine asymmetric dimethylation enzyme in mammals, is emerging as a potential drug target for cancer and cardiovascular disease. Understanding the catalytic mechanism of PRMT1 will facilitate inhibitor design. However, detailed mechanisms of the methyl transfer process and substrate deprotonation of PRMT1 remain unclear. In this study, we present a theoretical study on PRMT1 catalyzed arginine dimethylation by employing molecular dynamics (MD) simulation and quantum mechanics/molecular mechanics (QM/MM) calculation. Ternary complex models, composed of PRMT1, peptide substrate, and S-adenosyl-methionine (AdoMet) as cofactor, were constructed and verified by 30-ns MD simulation. The snapshots selected from the MD trajectory were applied for the QM/MM calculation. The typical S_N2-favored transition states of the first and second methyl transfers were identified from the potential energy profile. Deprotonation of substrate arginine occurs immediately after methyl transfer, and the carboxylate group of E144 acts as proton acceptor. Furthermore, natural bond orbital analysis and electrostatic potential calculation showed that E144 facilitates the charge redistribution during the reaction and reduces the energy barrier. In this study, we propose the detailed mechanism of PRMT1-catalyzed asymmetric dimethylation, which increases insight on the small-molecule effectors design, and enables further investigations into the physiological function of this family.     

酶法合成中丙氨酸的检测

本文建立了丙氨酸在醋酸缓冲液中形成丙氨酸-铜配离子及其十二烷基磺酸配离子对,使其紫外无吸收的丙氨酸在230nm处于有强紫外吸收,从而对酶法合成中的丙氨酸进行定量分析．该法在0～50mg／L范围内有良好的线性关系,直线方程为A(230)=0.01712·C（n=5）C：mg／L）。相关系数为0．9994,回收率为96．8％～104．0％,且该法不受酶反应液的影响,实验结果证明该检测体系简单、实用、测定结果可靠。     

一株产细菌纤维素菌株的筛选鉴定及其产物分析

从红茶菌液中筛选获得一株产细菌纤维素的菌株BC-41,经生理生化分析和分子生物学鉴定,现证实该菌株为中间葡糖酸醋杆菌(Gluconacetobacter intermedius)。对该菌株所产生的细菌纤维素进行了物理特性的表征和分析,获得以下数据:BC-41所产的纤维素纯度达到91.32%,湿纤维素膜含水率达99.16%,每克干纤维素膜能吸水28.59 g;扫描电子显微镜观察,显示该纤维素具有网状结构,且纤维束宽度分布在40-100 nm之间;X射线衍射分析,证实该纤维素的晶型为纤维素I型,结晶指数为48.8%;通过黏度测定法,得出该纤维素的平均聚合度达2 100。