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111.
Diversity of halophilic microorganisms: Environments,phylogeny, physiology,and applications 总被引:13,自引:0,他引:13
Oren A 《Journal of industrial microbiology & biotechnology》2002,28(1):56-63
The phylogenetic diversity of microorganisms living at high salt concentrations is surprising. Halophiles are found in each
of the three domains: Archaea, Bacteria, and Eucarya. The metabolic diversity of halophiles is great as well: they include
oxygenic and anoxygenic phototrophs, aerobic heterotrophs, fermenters, denitrifiers, sulfate reducers, and methanogens. The
diversity of metabolic types encountered decreases with salinity. The upper salinity limit at which each dissimilatory process
takes place is correlated with the amount of energy generated and the energetic cost of osmotic adaptation. Our understanding
of the biodiversity in salt-saturated environments has increased greatly in recent years. Using a combination of culture techniques,
molecular biological methods, and chemotaxonomic studies, we have obtained information on the nature of the halophilic Archaea
as well as the halophilic Bacteria that inhabit saltern crystallizer ponds. Several halophilic microorganisms are being exploited
in biotechnology. In some cases, such as the production of ectoine, the product is directly related to the halophilic behavior
of the producing microorganism. In other cases, such as the extraction of β-carotene from Dunaliella or the potential use of Haloferax species for the production of poly-β-hydroxyalkanoate or extracellular polysaccharides, similar products can be obtained
from non-halophiles, but halophilic microorganisms may present advantages over the use of non-halophilic counterparts. Journal of Industrial Microbiology & Biotechnology (2002) 28, 56–63 DOI: 10.1038/sj/jim/7000176
Received 20 May 2001/ Accepted in revised form 20 June 2001 相似文献
112.
社会竞争失败病因学的抑郁症树鼩模型 总被引:2,自引:0,他引:2
抑郁症是一种常见精神疾病,主要表现为持续两周以上的情绪低落。世界卫生组织预测在2030年抑郁症的疾病负担将高居所有疾病、伤残总负担的榜首。抑郁症面临三大难题:1)发病机理不完全清楚,因而缺乏有效的预测预防途径和生物学诊断;2)现有单胺类抗抑郁症药物起效慢,也可能导致患者自杀风险增加;3)缺乏副作用小的非单胺类快速起效抗抑郁症药物。针对这三大难题,长期以来,应用抑郁症啮齿类模型的众多研究并未取得实质性进展,至少部分因素归咎于啮齿类与人类大脑功能的极大种属差异。树鼩是灵长类近亲,具有更接近于人类的大脑功能。本文针对抑郁症发病机理假说、临床表象和抗抑郁症药物疗效等内容,综述了社会竞争失败病因学的抑郁症树鼩模型可能会具有更好的疾病同源性、表象一致性和药物预见性。这一被长期忽视的抑郁症树鼩模型尽管还需要进一步完善,但对其进一步深入研究可能为解决抑郁症的三大难题提供了一条新途径。 相似文献
113.
Chloroplasts are believed to be descendants of ancestral cyanobacteria that had peptidoglycan layer between the outer and the inner membranes. Historically, the glaucophyte Cyanophora paradoxa and the rhizopod Paulinella chromatophora were believed to harbor symbiotic cyanobacteria having peptidoglycan, which were conventionally named “cyanelles”. In addition, the complete set of genes involved in the synthesis of peptidoglycan has been found in the moss Physcomitrella patens and some plants and algae. The presence of peptidoglycan-like structures was demonstrated by a new metabolic labeling technique in P. patens. However, many green algae and all known red algae lack peptidoglycan-related genes. That is the reason why we questioned the origin of peptidoglycan-synthesizing enzymes in the chloroplasts of the green algae and plants. We performed phylogenetic analysis of ten enzymes involved in the synthesis of peptidoglycan exploiting the Gclust homolog clusters and additional genomic data. As expected, all the identified genes encoded in the chromatophore genome of P. chromatophora were closely related to cyanobacterial homologs. In the green algae and plants, only two genes, murA and mraY, were found to be closely related to cyanobacterial homologs. The origins of all other genes were diverse. Unfortunately, the origins of C. paradoxa genes were not clearly determined because of incompleteness of published genomic data. We discuss on the probable evolutionary scenarios to explain the mostly non-cyanobacterial origins of the biosynthetic enzymes of chloroplast peptidoglycan: A plausible one includes extensive multiple horizontal gene transfers during the early evolution of Viridiplantae. 相似文献
114.
Lipidomic changes during different growth stages of Nitzschia closterium f. minutissima 总被引:3,自引:0,他引:3
Xiaoling Su Jilin Xu Xiaojun Yan Peng Zhao Juanjuan Chen Chengxu Zhou Fang Zhao Shuang Li 《Metabolomics : Official journal of the Metabolomic Society》2013,9(2):300-310
Ultra Performance Liquid Chromatography-Electrospray ionization-Quadrupole-Time of Flight Mass Spectrometry (UPLC-ESI-Q-TOF–MS) is a powerful lipidomic tool. In this study, we developed a UPLC/Q-TOF–MS based method to investigate the lipid metabolomic changes in different growth phases of Nitzschia closterium f. minutissima. The data classification and biomarker selection were carried out by using multivariate statistical analysis, including principal components analysis (PCA), projection to latent structures with discriminant analysis (PLS-DA), and orthogonal projection to latent structures with discriminant analysis (OPLS-DA). We discovered that the intercellular lipid metabolites were significantly different among exponential, early stationary and late stationary phases. Thirty-one lipid molecules were selected and identified as putative biomarkers, including free fatty acid, Harderoporphyrin, phosphatidylglycerol, 1,2-diacyglycerl-3-O-4′-(N,N-trimethy)-homoserine, triacylglycerol, cholesterol, sulfoquinovosyldiacylglycerol, lyso-sulfoquinovosyldiacylglycerol, monogalactosyldiacylglycerol, digalactosyldiacylglycerol and lyso-digalactosyldiacylglycerol. These lipids have been shown previously to function in energy storage, membrane stability and photosynthesis efficiency during the growth of diatoms. Further analysis on the putative biomarkers demonstrated that nitrate starvation played critical role in the transition from exponential phase to stationary phase in N. closterium. This study is the first one to explore the lipidomic changes of microalgae in different growth phases, which promotes better understanding of their physiology and ecology. 相似文献
115.
Priya Padmanabhan Mukund R. Shukla J. Alan Sullivan Praveen K. Saxena 《Plant Cell, Tissue and Organ Culture》2017,128(1):145-160
C4 plants can efficiently accumulate CO2 in leaves and thus reduce wasteful oxygen fixation by the RuBisCO enzyme. Three C4 enzymes, namely carbonic anhydrase (CA), phosphoenol pyruvate (PEPC) and pyruvate orthophosphate dikinase (PPDK), were over expressed in Oryza sativa L. ssp. indica var. Khitish under the control of green tissue specific promoters PD54o, PEPC and PPDK, respectively. Integration of these genes was confirmed by Southern hybridization. The relative expression of PEPC, CA and PPDK were, respectively, 6.75, 6.57 and 3.6-fold higher in transgenic plants compared to wild type plants (control). Photosynthetic efficiency of the transgenic plants increased significantly along with a 12?% increase in grain yield compared to wild type plants. Compared to control plants, transgenic plants also showed phenotypic changes such as increased leaf blade size, root biomass, and plant height and anatomical changes such as greater leaf vein number, bundle sheath cells, and bulliform cells. Our findings indicate that the combined over expression of these three enzymes is an efficient strategy for incorporating beneficial physiological and anatomical features that will enable subsequent yield enhancement in C3 rice plants. 相似文献
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120.
Llorenç Milà i Canals Christian Bauer Jochen Depestele Alain Dubreuil Ruth Freiermuth Knuchel Gérard Gaillard Ottar Michelsen Ruedi Müller-Wenk Bernt Rydgren 《The International Journal of Life Cycle Assessment》2007,12(1):5-15
Background, Aim and Scope
Land use by agriculture, forestry, mining, house-building or industry leads to substantial impacts, particularly on biodiversity
and on soil quality as a supplier of life support functions. Unfortunately there is no widely accepted assessment method so
far for land use impacts. This paper presents an attempt, within the UNEP-SETAC Life Cycle Initiative, to provide a framework
for the Life Cycle Impact Assessment (LCIA) of land use.
Materials and Methods:
This framework builds from previous documents, particularly the SETAC book on LCIA (Lindeijer et al. 2002), developing essential
issues such as the reference for occupation impacts; the impact pathways to be included in the analysis; the units of measure
in the impact mechanism (land use interventions to impacts); the ways to deal with impacts in the future; and bio-geographical
differentiation.
Results:
The paper describes the selected impact pathways, linking the land use elementary flows (occupation; transformation) and parameters
(intensity) registered in the inventory (LCI) to the midpoint impact indicators and to the relevant damage categories (natural
environment and natural resources). An impact occurs when the land properties are modified (transformation) and also when
the current man-made properties are maintained (occupation).
Discussion:
The size of impact is the difference between the effect on land quality from the studied case of land use and a suitable reference
land use on the same area (dynamic reference situation). The impact depends not only on the type of land use (including coverage
and intensity) but is also heavily influenced by the bio-geographical conditions of the area. The time lag between the land
use intervention and the impact may be large; thus land use impacts should be calculated over a reasonable time period after
the actual land use finishes, at least until a new steady state in land quality is reached.
Conclusions:
Guidance is provided on the definition of the dynamic reference situation and on methods and time frame to assess the impacts
occurring after the actual land use. Including the occupation impacts acknowledges that humans are not the sole users of land.
Recommendations and Perspectives:
The main damages affected by land use that should be considered by any method to assess land use impacts in LCIA are: biodiversity
(existence value); biotic production potential (including soil fertility and use value of biodiversity); ecological soil quality
(including life support functions of soil other than biotic production potential). Bio-geographical differentiation is required
for land use impacts, because the same intervention may have different consequences depending on the sensitivity and inherent
land quality of the environment where it occurs. For the moment, an indication of how such task could be done and likely bio-geographical
parameters to be considered are suggested. The recommendation of indicators for the suggested impact categories is a matter
of future research. 相似文献