应用飞秒时间分辨瞬态吸收光谱研究蛋白质中距离相关长程电荷转移:光合细菌天线复合体LH2与TiO2纳米颗粒超分子组装体个例初探

蛋白质在生物体内电荷转移过程中所起的作用迄今仍然是一个有争议的问题.其争论焦点是蛋白质在生物电荷转移过程中是否提供特殊的电子传递通道或者是仅仅作为普通的有机介质.应用飞秒时间分辨瞬态吸收光谱研究由光合细菌天线分子和平均粒径为8 nm的TiO2组装而成的超分子系统中长程电荷转移.晶体结构研究表明,光合细菌天线分子具有由多个α-脱辅基和β-脱辅基蛋白跨膜螺旋构成的双层空心柱面体结构,其中α-脱辅基蛋白跨膜螺旋构成的小环状体套于β-脱辅基蛋白跨膜螺旋构成的大环状体中.小环状体的空腔直径约为3.6 nm.光合色素细菌叶绿素和β-胡萝卜素分子处于两环之间.细菌叶绿素距离外周胞质膜最近,预计为1 nm.本研究试图将TiO2纳米颗粒部分装入光合细菌膜蛋白的腔体中,探讨细菌叶绿素与TiO2纳米颗粒间进行的光致长程电荷转移,进而揭示蛋白质在电荷转移过程中所起的作用.实验观察到细菌叶绿素B850在LH2/TiO2中的基态漂白恢复的时间常数明显地比在LH2中短,应用长程电荷转移模型,将蛋白质视为普通介电媒体,由电荷转移速率推算得到细菌叶绿素与TiO2纳米颗粒最近表面的距离为0.6 nm,表明TiO2纳米颗粒已经成功地部分装入光合细菌天线分子的空腔中.     

Successful tumor eradication was achieved by collaboration of augmented cytotoxic activity and anti-angiogenic effects following therapeutic vaccines containing helper-activating analog-loaded dendritic cells and tumor antigen DNA

We reported previously that pigeon cytochrome c-derived peptides (Pan-IA), which bind broad ranges of MHC class II molecules efficiently, activate T helper (Th) function in mice. In an experimental model, Pan-IA DNA vaccines augmented antitumor immunity in tumor antigen-immunized mice. To elicit more potent antitumor immunity and to eradicate tumors in a therapeutic setting, Pan-IA-loaded dendritic cells (DCs) were inoculated in combination with vaccines including ovalbumin (OVA) antigen DNA in tumor-bearing mice. Seventy percent of the immunized mice survived tumor-free for at least 4 months after treatment. In contrast, mice vaccinated with OVA DNA, either with or without naïve DCs, did not eliminate the tumors and died within 5 weeks. Only in mice vaccinated with OVA DNA and Pan-IA-loaded DCs were both cytotoxic and helper responses specific for OVA induced at the spleen and tumor sites as well as at the vaccination sites. Furthermore, accumulation of OVA-specific CD4⁺ and CD8⁺ T lymphocytes and interferon-gamma-mediated anti-angiogenesis were observed in the tumors of these mice. Thus, the combined vaccination primed both tumor-specific cytotoxicity and helper immunity resulting in augmented tumor lysis ability and anti-angiogenic effects. This is the first report to show that most established tumors were successfully eradicated by collaboration of potent antitumor immunity and anti-angiogenic effects by vaccination with tumor antigens and helper-activating analogs. This novel vaccination strategy is broadly applicable, regardless of identifying helper epitopes in target molecules, and contributes to the development of therapeutic cancer vaccines.     

Direct and Efficient Production of Ethanol from Cellulosic Material with a Yeast Strain Displaying Cellulolytic Enzymes

For direct and efficient ethanol production from cellulosic materials, we constructed a novel cellulose-degrading yeast strain by genetically codisplaying two cellulolytic enzymes on the cell surface of Saccharomyces cerevisiae. By using a cell surface engineering system based on α-agglutinin, endoglucanase II (EGII) from the filamentous fungus Trichoderma reesei QM9414 was displayed on the cell surface as a fusion protein containing an RGSHis6 (Arg-Gly-Ser-His₆) peptide tag in the N-terminal region. EGII activity was detected in the cell pellet fraction but not in the culture supernatant. Localization of the RGSHis6-EGII-α-agglutinin fusion protein on the cell surface was confirmed by immunofluorescence microscopy. The yeast strain displaying EGII showed significantly elevated hydrolytic activity toward barley β-glucan, a linear polysaccharide composed of an average of 1,200 glucose residues. In a further step, EGII and β-glucosidase 1 from Aspergillus aculeatus No. F-50 were codisplayed on the cell surface. The resulting yeast cells could grow in synthetic medium containing β-glucan as the sole carbon source and could directly ferment 45 g of β-glucan per liter to produce 16.5 g of ethanol per liter within about 50 h. The yield in terms of grams of ethanol produced per gram of carbohydrate utilized was 0.48 g/g, which corresponds to 93.3% of the theoretical yield. This result indicates that efficient simultaneous saccharification and fermentation of cellulose to ethanol are carried out by a recombinant yeast cells displaying cellulolytic enzymes.     

Varied effects of Pyrococcus furiosus prefoldin and P. furiosus chaperonin on the refolding reactions of substrate proteins

Prefoldin is a molecular chaperone found in the archaeal and eukaryotic cytosol. Prefoldin can stabilize tentatively nascent polypeptide chains or non-native forms of mainly cytoskeletal proteins, which are subsequently delivered to group II chaperonin to accomplish their precise folding. However, the detailed mechanism is not well known, especially with regard to endogenous substrate proteins. Here, we report the effects of Pyrococcus furiosus prefoldin (PfuPFD) on the refolding reactions of Pyrococcus furiosus citrate synthase (PfuCS) and Aequorea enhanced green fluorescence protein (GFPuv) in the presence or absence of Pyrococcus furiosus chaperonin (PfuCPN). We confirmed that both PfuPFD and PfuCPN interacted with PfuCS and GFPuv refolding intermediates. However, the interactions between chaperone and substrate were different for each case, as was the final effect on the refolding reaction. Effects on the refolding reaction varied from passive effects such as ATP-dependent binding and release (PfuCPN towards GFPuv) and binding which leads to folding arrest (PfuPFD towards GFPuv), to active effects such as net increase in thermal stability (PfuCPN towards PfuCS) to an active improvement in refolding yield (PfuPFD towards PfuCS). We postulate that differences in molecular interactions between substrate and chaperone lead to these differences in chaperoning effects.     

Volatile Neutral Compounds from Heat-degradated Pork Fat and their Conversion into Lactones

The volatile neutral compounds were collected from pork fat heated at 160~170°C for 3 hr under bubbling with air. They were analyzed by MS, GC and sometimes IR, and it was found that they consisted of 13 aldehydes, 2 ketones, 6 alcohols and 7 hydrocarbons. To elucidate one of the mechanisms of lactone formation in the flavor of heated meat fats, it was examined whether neutral compounds could be converted into lactones by heat. Lactones, which were identified through GC-MS analysis, was developed in trace amount from the heated undecane and not from 2t-decenal. It was expected through the quantitative estimation that the separated neutral compounds and undecane mixed with pork fats were converted into lactones.     

Studies on Changes in Stored Shell Eggs

The content of the ovomucin gel obtained from the gel parts of stored thick white decreased during storage. Changes of the content of the ovomucin gel (A) was much larger than that of the ovomucin gel (B). The content of the ovomucin sol obtained from the sol parts of stored thick white increased during storage.

The hexose and hexosamine contents of the ovomucin gel (B) decreased to about one half and the sialic acid content decreased to one eighth after 20 days storage at 30°C On the other hand, the carbonhydrate contents of the ovomucin sol (B) increased during storage and those obtained from sol parts of the stored (20 days) thick white were higher than those of the control ovomucin gel (B) obtained from the newly laid thick white. The amino acid composition of the ovomucin gel (B) and sol (B) did not show a great deal of change during storage.

It is suggested from these results that the properties of the ovomucin gel (B) changed greatly during storage; one portion of the ovomucin gel (B), the carbohydrate-rich component, solubilized to the sol parts of stored thick white and the other portion, the carbohydrate-poor component, remained insoluble.     

Raman spectra and conformations of the cis-unsaturated fatty-acid chains

Raman spectra of low (13°C) and high (16°C) m.p. crystals of oleic acid were recorded and the spectral differences were ascribed to different conformations around a pair of sp², CC axes, i.e. (skew, skew′) and (skew, skew). Crystalline modifications (m.p. 29°C and 29.5°C) of petroselinic acid were found for the first time; after spectral comparison with oleic acid conformations in those crystals were predicted to be (skew, skew′) and (skew, skew). Raman spectra of dioleoyl- and dipetroselinoyl-l-α-phosphatidylcholines were measured for different crystalline phases and the conformation was examined.The skeletal vibration bands of the polymethylene chains of cis- and trans-unsaturated fatty-acids were analysed by using the frequency-phase difference relationships of saturated fatty-acids. The ν₄ (stretching) vibrations were localised within each polymethylene chain and the bands of an acid CH₃(CH₂)_m?2CHCH(CH₂)_n?2COOH were explained in terms of the set of phase differences δ = kπ/m and kπ/n (k = 1, 2,..). A unique ν₄ vibration with δ = π/2m was also found. The ν₅ (bending) vibrations sometimes couple strongly with each other to form overall vibrations characterised by δ = kπ/(m + n).Implications of the cis-olefin group for the physical properties of phospholipid bilayers and the applicability of Raman spectroscopy in probing chain conformations were discussed.