Solution structure of an N-capping peptide from the N-terminal leucine-repeat region of hepatitis delta antigen

Hepatitis delta virus (HDV) is a satellite virus of the hepatitis B virus (HBV) which provides the surface antigen for the viral coat. The RNA genome of HDV encodes two proteins, the small delta antigen and the large delta antigen, which differ only with the latter having an additional 19 amino acids at the C-terminus. Previously, we have shown that dAg24-50, a synthetic peptide corresponding to residues 24-50 of the N-terminal leucine-repeat region of hepatitis delta antigen, binds to the viral RNA and forms an alpha-helical conformation in TFE-containing solution. However, it exhibited low alpha-helicity (less than 5%) in the absence of TFE. In order to obtain biologically active delta antigen peptides with higher structural stability in solution, an N-capping 21-residue polypeptide corresponding to residues 24-38 of hepatitis delta antigen (dAg(Cap24-38am)) was synthesized and, surprisingly, its solution structure was found to be a stable alpha-helix (64%) by circular dichroism and 1H NMR techniques. Moreover, the structure of the capping box shows the characteristic L-shaped bend perpendicular to the helix axis. This structural knowledge provides a molecular basis for understanding the role of the N-terminal leucine-repeat region of hepatitis delta antigen and has a significant potential for the development of diagnostic and therapeutic methods for HDV.     

Lack of obvious 50 kilobase pair DNA fragments in DNA fragmentation factor 45-deficient thymocytes upon activation of apoptosis

The DNA fragmentation factor 45 (DFF45/ICAD) is a key subunit of a heterodimeric DNase complex critical for the induction of DNA fragmentation during apoptosis in vivo. To further assess the importance of DFF45 in chromosomal DNA degradation, we induced apoptosis in wild-type control and DFF45 deficient thymocytes and compared the cleavage of chromosomal DNA to 50 kilobase pair size fragments. We found that there is a lack of obvious large chromosomal DNA fragments upon treatments by various apoptotic agents in DFF45 deficient thymocytes. The major organ systems in the DFF45 mutant mice either two months or fifteen months of age appear normal. These results suggest that functional DFF45 is required for cleavage of DNA into both large size and oligonucleosomal size fragments in thymocytes during apoptosis. However, deficiency in DFF45 apparently does not significantly affect normal mouse development and tissue homeostasis.     

The effect of anisotonic media upon cellular ultra-structure in fresh and fixed rat brain

Summary When tissue slices or small blocks of unfixed rat cerebrum are incubated in various anisotonic physiological media, distinctive morphological changes are induced in glial cells, neurons, and endothelial cells. The variation in observed cellular swelling and shrinkage may be related to differences in ionic content of the cytoplasm of these cells. When HAA, glutal, and osmium tetroxide fixed tissue is incubated in this manner, only the cerebrum fixed in HAA responds to osmotic inequilibrium in a manner similar to unfixed tissue. Although HAA does not fix tissues very well, the permeability of plasma membranes in the brain appears to be less altered by HAA than by glutal or osmium tetroxide. The relationship of these findings to a demonstration of the extracellular space in HAA fixed tissues is discussed.This work was supported by grants (U-1293) from the Health Research Council of the City of New York and (NB 04161-02) from the National Institute of Neurological Disease and Blindness of the National Institutes of Health.     

GIPC and GAIP form a complex with TrkA: a putative link between G protein and receptor tyrosine kinase pathways

NGF initiates the majority of its neurotrophic effects by promoting the activation of the tyrosine kinase receptor TrkA. Here we describe a novel interaction between TrkA and GIPC, a PDZ domain protein. GIPC binds to the juxtamembrane region of TrkA through its PDZ domain. The PDZ domain of GIPC also interacts with GAIP, an RGS (regulators of G protein signaling) protein. GIPC and GAIP are components of a G protein-coupled signaling complex thought to be involved in vesicular trafficking. In transfected HEK 293T cells GIPC, GAIP, and TrkA form a coprecipitable protein complex. Both TrkA and GAIP bind to the PDZ domain of GIPC, but their binding sites within the PDZ domain are different. The association of endogenous GIPC with the TrkA receptor was confirmed by coimmunoprecipitation in PC12 (615) cells stably expressing TrkA. By immunofluorescence GIPC colocalizes with phosphorylated TrkA receptors in retrograde transport vesicles located in the neurites and cell bodies of differentiated PC12 (615) cells. These results suggest that GIPC, like other PDZ domain proteins, serves to cluster transmembrane receptors with signaling molecules. When GIPC is overexpressed in PC12 (615) cells, NGF-induced phosphorylation of mitogen-activated protein (MAP) kinase (Erk1/2) decreases; however, there is no effect on phosphorylation of Akt, phospholipase C-gamma1, or Shc. The association of TrkA receptors with GIPC and GAIP plus the inhibition of MAP kinase by GIPC suggests that GIPC may provide a link between TrkA and G protein signaling pathways.     

Small ruminants: Digestive capacity differences among four species weighing less than 20 kg

Small ruminants are generally classified as either browsers or frugivores. We compared intake and digestion in one browsing species, the pudu (Pudu pudu), body weight 9 kg, and three frugivorous species, the red brocket (Mazama americana), 20 kg, the bay duiker (Cephalophus dorsalis), 12 kg, and Maxwell's duiker (C. maxwellii), 9 kg. Rations comprised: a commercial grain and alfalfa pellet, a small amount of vegetables, and mixed hay. Across species, neutral-detergent fiber (insoluble fiber) consumed averaged 34.2 ± 2.6% of dry matter (DM) while the crude protein consumed averaged 16.1 ± 0.5% DM. Apparent DM digestion was similar in pudu (75.2 ± 4.7%), brocket (73.2 ± 1.1%), and Maxwell's duikers (73.0 ± 2.8%), and significantly lower (P = 0.0167) in bay duikers (67.1 ± 4.3%). There were significant differences among species in digestibilities of neutral-detergent fiber, hemicellulose, and cellulose, but they did not follow body size differences, since larger species were expected to show higher digestion coefficients for fiber compared to smaller species. The type of fiber fed may have influenced these results. Frugivores may be adapted to a diet of soluble fibers, as might be found in wild fruits, instead of the insoluble fibers in the diet fed. Passage trials were conducted on the two smallest species. The mean transit time for pudu was 29.9 ± 0.8 hr, and for the Maxwell's duiker was 42.2 ± 6.4 hr. © 1996 Wiley-Liss, Inc.     

A c-Myc–SIRT1 feedback loop regulates cell growth and transformation

The protein deacetylase SIRT1 has been implicated in a variety of cellular functions, including development, cellular stress responses, and metabolism. Increasing evidence suggests that similar to its counterpart, Sir2, in yeast, Caenorhabditis elegans, and Drosophila melanogaster, SIRT1 may function to regulate life span in mammals. However, SIRT1''s role in cancer is unclear. During our investigation of SIRT1, we found that c-Myc binds to the SIRT1 promoter and induces SIRT1 expression. However, SIRT1 interacts with and deacetylates c-Myc, resulting in decreased c-Myc stability. As a consequence, c-Myc''s transformational capability is compromised in the presence of SIRT1. Overall, our experiments identify a c-Myc–SIRT1 feedback loop in the regulation of c-Myc activity and cellular transformation, supporting/suggesting a role of SIRT1 in tumor suppression.     

耐高盐枯草芽孢杆菌XP合成球形纳米硒及其抑制草莓病原真菌生物活性

生物方法合成纳米材料具有低能耗、高安全性以及环境友好等优良特点,因而备受人们关注.利用细菌将硒酸盐或亚硒酸盐还原为单质硒,不仅可以降低硒毒性,而且还能获得价值更高的生物纳米材料.文中选用可耐受高盐环境胁迫的枯草芽孢杆菌亚种Bacillus subtilis subspecies stercoris strain XP构...