A global alfalfa diversity panel reveals genomic selection signatures in Chinese varieties and genomic associations with root development

Alfalfa (Medicago sativa L.) is an important forage crop worldwide. However, little is known about the effects of breeding status and different geographical populations on alfalfa improvement. Here, we sequenced 220 alfalfa core germplasms and determined that Chinese alfalfa cultivars form an independent group, as evidenced by comparisons of F_ST values between different subgroups, suggesting that geographical origin plays an important role in group differentiation. By tracing the influence of geographical regions on the genetic diversity of alfalfa varieties in China, we identified 350 common candidate genetic regions and 548 genes under selection. We also defined 165 loci associated with 24 important traits from genome-wide association studies. Of those, 17 genomic regions closely associated with a given phenotype were under selection, with the underlying haplotypes showing significant differences between subgroups of distinct geographical origins. Based on results from expression analysis and association mapping, we propose that 6-phosphogluconolactonase (MsPGL) and a gene encoding a protein with NHL domains (MsNHL) are critical candidate genes for root growth. In conclusion, our results provide valuable information for alfalfa improvement via molecular breeding.     

Structure of plant photosystem I−light harvesting complex I supercomplex at 2.4 Å resolution

Photosystem I (PSI) is one of the two photosystems in photosynthesis, and performs a series of electron transfer reactions leading to the reduction of ferredoxin. In higher plants, PSI is surrounded by four light-harvesting complex I (LHCI) subunits, which harvest and transfer energy efficiently to the PSI core. The crystal structure of PSI-LHCI supercomplex has been analyzed up to 2.6 Å resolution, providing much information on the arrangement of proteins and cofactors in this complicated supercomplex. Here we have optimized crystallization conditions, and analyzed the crystal structure of PSI-LHCI at 2.4 Å resolution. Our structure showed some shift of the LHCI, especially the Lhca4 subunit, away from the PSI core, suggesting the indirect connection and inefficiency of energy transfer from this Lhca subunit to the PSI core. We identified five new lipids in the structure, most of them are located in the gap region between the Lhca subunits and the PSI core. These lipid molecules may play important roles in binding of the Lhca subunits to the core, as well as in the assembly of the supercomplex. The present results thus provide novel information for the elucidation of the mechanisms for the light-energy harvesting, transfer and assembly of this supercomplex.     

Protein kinases in plant responses to drought,salt, and cold stress

Protein kinases are major players in various signal transduction pathways. Understanding the molecular mechanisms behind plant responses to biotic and abiotic stresses has become critical for developing and breeding climate-resilient crops. In this review,we summarize recent progress on understanding plant drought, salt, and cold stress responses, with a focus on signal perception and transduction by different protein kinases, especially sucrose nonfermenting1(SNF1)-related protein kinases(Sn RKs),mitogen-activated protein kinase(MAPK) cascades,calcium-dependent protein kinases(CDPKs/CPKs),and receptor-like kinases(RLKs). We also discuss future challenges in these research fields.     

甘草叶片形态结构和光合作用对干旱胁迫的响应

叶片结构在植物防御生物和非生物胁迫方面起着重要的作用,可通过合成、储存和分泌次生代谢产物提高植物抗性。以甘草幼苗为试材,采用盆栽控水自然干旱法,探讨叶片光合作用、气孔微形态和腺体形态对干旱胁迫的响应。结果表明:①随着干旱胁迫程度的加剧,叶片净光合速率(Pn)、气孔导度(Gs)和蒸腾速率(Tr)均呈先升高后降低的趋势;其中胞间CO2浓度(Ci)在重度干旱胁迫(severe stress,SS)时迅速增高。②随着干旱胁迫程度的加剧,叶片总气孔密度和气孔开张比呈先增大后减小的趋势;而气孔开张宽度呈逐渐减小的趋势。③随着干旱胁迫程度的加剧,叶片上表皮和下表皮腺体密度总数整体上呈增大的趋势,腺体颜色随着干旱胁迫程度的加剧逐渐加深,形状出现不规则褶皱和内陷。总之,甘草叶片表面的腺体特征参与抗旱逆境调节,从而避免干旱胁迫对甘草植株的伤害;在SS下,胁迫程度加速了气孔细胞的程序性死亡(PCD),甘草幼苗失去抗旱能力。     

14种石斛属(兰科)植物的花粉团形态及分类学意义

利用体式显微镜和扫描电镜观察了14种石斛的花粉团形态及其表面纹饰超微特征,为该属的物种划分和系统演化提供花粉形态证据。解剖镜下,14种石斛的花药里有4枚花粉团,表面金黄油亮呈蜡质,质地坚硬。根据每种石斛的4枚花粉团的总体轮廓形态和大小,可分为3种形态(心形、近心形和长心形)和4种类型(极小花粉团,小花粉团,大花粉团和超大花粉团)。根据单个花粉团边界轮廓的曲直,可将其分为4种类型(月牙型、弓型、棍状和米粒型)。扫描电镜下,14种石斛的花粉团表面纹饰类型有5种(光滑平整型、光滑带丝状突起型、光滑不平整型、粗网纹状型和皱波状型),在广东石斛和球花石斛的花粉团表面观察到晶体的存在。花粉团的形态大小和外壁纹饰特征在种间变化明显,对澄清石斛属的分类学问题有一定意义。     

玉屏风颗粒联合西咪替丁对过敏性紫癜患儿临床疗效及外周血免疫学指标的影响

目的:探讨玉屏风颗粒联合西咪替丁对过敏性紫癜患儿临床疗效及外周血免疫学指标的影响。方法:选取2017年1月至2019年12月我院68例过敏性紫癜患儿为研究对象,根据随机化原则将受试儿进行分组,其中对照组34例患儿仅接受西咪替丁治疗,研究组45例患儿在对照组的基础上口服玉屏风颗粒治疗,比较两组的治疗效果、治疗前后外周血免疫学指标水平变化及用药安全性。结果:研究组临床治疗总有效率显著高于对照组(P<0.05),治疗前两组各免疫学指标及各炎性因子水平比较无统计学差异(P>0.05),治疗后两组各免疫学指标及各炎性因子水平较治疗前均明显降低,且研究组显著低于对照组(P<0.05),两组治疗期间不良反应发生率无差异(P>0.05)。结论:玉屏风颗粒联合西咪替丁可有效改善患儿的临床症状及外周血免疫学指标,疗效安全显著,值得在过敏性紫癜患儿治疗中应用及推广。     

丁苯酞对缺血性脑卒中大鼠记忆能力及海马5-HT1A受体和PKA信号通路活化的影响

目的:研究丁苯酞对缺血性脑卒中大鼠学习和记忆能力的影响和大鼠海马5-HT1A受体和PKA信号通路的调控作用。方法:将雄性SD大鼠随机分为假手术组、模型组和丁苯酞组(n=15)。丁苯酞组大鼠建立大脑中动脉闭塞模型,并按照每天60 mg/kg的剂量灌胃丁苯酞,假手术组和模型组灌胃等体积的玉米油,共给药2周。治疗完成后对各组大鼠进行神经功能缺损评估和Morris水迷宫测试(n=15)。通过磁共振成像(MRI)检测梗塞区域(n=15)。ELISA法检测海马组织PKA激酶活性(n=6)。使用钙检测试剂盒测定海马组织的细胞内[Ca²⁺]浓度(n=6)。Western blot检测海马组织中5-羟色胺(1A)受体(5-HT1A)、谷氨酸N-甲基-D-天冬氨酸受体1(NMDA1)和α-氨基-3-羟基-5-甲基-4-异恶唑丙酸受体1(AMPA1)的表达(n=6)。结果:与模型组相比:丁苯酞组大鼠的逃避潜伏期显著降低,而穿越平台次数显著升高(P<0.05);大鼠的神经功能缺损评分和脑梗死体积较显著降低(P<0.05);大鼠的PKA激酶活性和细胞内[Ca²⁺]浓度显著升高(P<0.05);丁苯酞组大鼠的5-HT1A蛋白相对表达量显著降低,而AMPA1和NMDA1的磷酸化水平显著升高(P<0.05)。结论:丁苯酞可改善缺血性脑卒中大鼠的学习和记忆能力,下调海马5-HT1A受体活性并激活PKA信号通路。     

金莲花液雾化吸入对慢性鼻窦炎功能性内窥镜术后患者鼻通气功能、生活质量和血清炎性因子的影响

目的:探讨金莲花液雾化吸入对慢性鼻窦炎(CRS)功能性内窥镜术后患者鼻通气功能、生活质量和血清炎性因子的影响。方法:选取2017年10月~2019年8月期间我院收治的CRS功能性内窥镜术后患者160例,采用随机数字表法将患者分为对照组(n=80)和研究组(n=80),对照组术后在常规治疗的基础上予以鼻腔生理盐水雾化吸入治疗,研究组在常规治疗的基础上予以金莲花液雾化吸入治疗,比较两组患者鼻通气功能[鼻腔最小截面积(NMCSA)、鼻腔容积(NV)]、生活质量和血清炎性因子[白介素-5(IL-5)、肿瘤坏死因子-α(TNF-α)、降钙素原(PCT)]及预后相关指标。结果:两组患者治疗10 d后NMCSA、NV均升高,且研究组高于对照组(P<0.05)。两组治疗10 d后情感职能、躯体疼痛、社会功能、生理功能、精神健康、活力、生理职能、总体健康的维度评分均升高,且研究组高于对照组(P<0.05)。两组治疗10 d后血清IL-5、TNF-α、PCT水平均较治疗前下降,且研究组低于对照组(P<0.05)。研究组术腔清洁时间、上皮化时间均短于对照组(P<0.05);研究组鼻黏液纤毛传输速度高于对照组(P<0.05)。结论:金莲花液雾化吸入治疗CRS功能性内窥镜术后患者,可有效改善其鼻通气功能及生活质量,抑制炎性反应,促进患者恢复。     

Targeted sequencing and integrative analysis of 3,195 Chinese patients with neurodevelopmental disorders prioritized 26 novel candidate genes

Neurodevelopmental disorders(NDDs) are a set of complex disorders characterized by diverse and cooccurring clinical symptoms. The genetic contribution in patients with NDDs remains largely unknown.Here, we sequence 519 NDD-related genes in 3,195 Chinese probands with neurodevelopmental phenotypes and identify 2,522 putative functional mutations consisting of 137 de novo mutations(DNMs) in 86 genes and 2,385 rare inherited mutations(RIMs) with 22 X-linked hemizygotes in 13 genes, 2 homozygous mutations in 2 genes and 23 compound heterozygous mutations in 10 genes. Furthermore, the DNMs of16,807 probands with NDDs are retrieved from public datasets and combine in an integrated analysis with the mutation data of our Chinese NDD probands by taking 3,582 in-house controls of Chinese origin as background. We prioritize 26 novel candidate genes. Notably, six of these genes d ITSN1, UBR3, CADM1,RYR3, FLNA, and PLXNA3 d preferably contribute to autism spectrum disorders(ASDs), as demonstrated by high co-expression and/or interaction with ASD genes confirmed via rescue experiments in a mouse model. Importantly, these genes are differentially expressed in the ASD cortex in a significant manner and involved in ASD-associated networks. Together, our study expands the genetic spectrum of Chinese NDDs,further facilitating both basic and translational research.     

Leptin gene-targeted editing in ob/ob mouse adipose tissue based on the CRISPR/Cas9 system

Gene therapy has become the most effective treatment for monogenic diseases. Congenital LEPTIN deficiency is a rare autosomal recessive monogenic obesity syndrome caused by mutations in the Leptin gene. Ob/ob mouse is a monogenic obesity model, which carries a homozygous point mutation of C to T in Exon 2 of the Leptin gene. Here, we attempted to edit the mutated Leptin gene in ob/ob mice preadipocytes and inguinal adipose tissues using CRISPR/Cas9 to correct the C to T mutation and restore the production of LEPTIN protein by adipocytes. The edited preadipocytes exhibit a correction of 5.5% of Leptin alleles and produce normal LEPTIN protein when differentiated into mature adipocytes. The ob/ob mice display correction of 1.67% of Leptin alleles, which is sufficient to restore the production and physiological functions of LEPTIN protein, such as suppressing appetite and alleviating insulin resistance. Our study suggests CRISPR/Cas9-mediated in situ genome editing as a feasible therapeutic strategy for human monogenic diseases, and paves the way for further research on efficient delivery system in potential future clinical application.