UNC-6 (netrin) stabilizes oscillatory clustering of the UNC-40 (DCC) receptor to orient polarity

The receptor deleted in colorectal cancer (DCC) directs dynamic polarizing activities in animals toward its extracellular ligand netrin. How DCC polarizes toward netrin is poorly understood. By performing live-cell imaging of the DCC orthologue UNC-40 during anchor cell invasion in Caenorhabditis elegans, we have found that UNC-40 clusters, recruits F-actin effectors, and generates F-actin in the absence of UNC-6 (netrin). Time-lapse analyses revealed that UNC-40 clusters assemble, disassemble, and reform at periodic intervals in different regions of the cell membrane. This oscillatory behavior indicates that UNC-40 clusters through a mechanism involving interlinked positive (formation) and negative (disassembly) feedback. We show that endogenous UNC-6 and ectopically provided UNC-6 orient and stabilize UNC-40 clustering. Furthermore, the UNC-40–binding protein MADD-2 (a TRIM family protein) promotes ligand-independent clustering and robust UNC-40 polarization toward UNC-6. Together, our data suggest that UNC-6 (netrin) directs polarized responses by stabilizing UNC-40 clustering. We propose that ligand-independent UNC-40 clustering provides a robust and adaptable mechanism to polarize toward netrin.     

ADF/cofilin promotes invadopodial membrane recycling during cell invasion in vivo

Invadopodia are protrusive, F-actin–driven membrane structures that are thought to mediate basement membrane transmigration during development and tumor dissemination. An understanding of the mechanisms regulating invadopodia has been hindered by the difficulty of examining these dynamic structures in native environments. Using an RNAi screen and live-cell imaging of anchor cell (AC) invasion in Caenorhabditis elegans, we have identified UNC-60A (ADF/cofilin) as an essential regulator of invadopodia. UNC-60A localizes to AC invadopodia, and its loss resulted in a dramatic slowing of F-actin dynamics and an inability to breach basement membrane. Optical highlighting indicated that UNC-60A disassembles actin filaments at invadopodia. Surprisingly, loss of unc-60a led to the accumulation of invadopodial membrane and associated components within the endolysosomal compartment. Photobleaching experiments revealed that during normal invasion the invadopodial membrane undergoes rapid recycling through the endolysosome. Together, these results identify the invadopodial membrane as a specialized compartment whose recycling to form dynamic, functional invadopodia is dependent on localized F-actin disassembly by ADF/cofilin.     

Predictive Tools for Severe Dengue Conforming to World Health Organization 2009 Criteria

Background

Dengue causes 50 million infections per year, posing a large disease and economic burden in tropical and subtropical regions. Only a proportion of dengue cases require hospitalization, and predictive tools to triage dengue patients at greater risk of complications may optimize usage of limited healthcare resources. For severe dengue (SD), proposed by the World Health Organization (WHO) 2009 dengue guidelines, predictive tools are lacking.

Methods

We undertook a retrospective study of adult dengue patients in Tan Tock Seng Hospital, Singapore, from 2006 to 2008. Demographic, clinical and laboratory variables at presentation from dengue polymerase chain reaction-positive and serology-positive patients were used to predict the development of SD after hospitalization using generalized linear models (GLMs).

Principal findings

Predictive tools compatible with well-resourced and resource-limited settings – not requiring laboratory measurements – performed acceptably with optimism-corrected specificities of 29% and 27% respectively for 90% sensitivity. Higher risk of severe dengue (SD) was associated with female gender, lower than normal hematocrit level, abdominal distension, vomiting and fever on admission. Lower risk of SD was associated with more years of age (in a cohort with an interquartile range of 27–47 years of age), leucopenia and fever duration on admission. Among the warning signs proposed by WHO 2009, we found support for abdominal pain or tenderness and vomiting as predictors of combined forms of SD.

Conclusions

The application of these predictive tools in the clinical setting may reduce unnecessary admissions by 19% allowing the allocation of scarce public health resources to patients according to the severity of outcomes.     

Reporting Quality of Systematic Reviews/Meta-Analyses of Acupuncture

Background

The QUOROM and PRISMA statements were published in 1999 and 2009, respectively, to improve the consistency of reporting systematic reviews (SRs)/meta-analyses (MAs) of clinical trials. However, not all SRs/MAs adhere completely to these important standards. In particular, it is not clear how well SRs/MAs of acupuncture studies adhere to reporting standards and which reporting criteria are generally ignored in these analyses.

Objectives

To evaluate reporting quality in SRs/MAs of acupuncture studies.

Methods

We performed a literature search for studies published prior to 2014 using the following public archives: PubMed, EMBASE, Web of Science, the Cochrane Database of Systematic Reviews (CDSR), the Chinese Biomedical Literature Database (CBM), the Traditional Chinese Medicine (TCM) database, the Chinese Journal Full-text Database (CJFD), the Chinese Scientific Journal Full-text Database (CSJD), and the Wanfang database. Data were extracted into pre-prepared Excel data-extraction forms. Reporting quality was assessed based on the PRISMA checklist (27 items).

Results

Of 476 appropriate SRs/MAs identified in our search, 203, 227, and 46 were published in Chinese journals, international journals, and the Cochrane Database, respectively. In 476 SRs/MAs, only 3 reported the information completely. By contrast, approximately 4.93% (1/203), 8.81% (2/227) and 0.00% (0/46) SRs/Mas reported less than 10 items in Chinese journals, international journals and CDSR, respectively. In general, the least frequently reported items (reported≤50%) in SRs/MAs were “protocol and registration”, “risk of bias across studies”, and “additional analyses” in both methods and results sections.

Conclusions

SRs/MAs of acupuncture studies have not comprehensively reported information recommended in the PRISMA statement. Our study underscores that, in addition to focusing on careful study design and performance, attention should be paid to comprehensive reporting standards in SRs/MAs on acupuncture studies.     

Association of Common Variants in TCF4 and PTPRG with Fuchs' Corneal Dystrophy: A Systematic Review and Meta-Analysis

Topic

A meta-analysis of TCF4 and PTPRG gene variants in Fuchs'' corneal dystrophy (FCD).

Clinical relevance

To identify novel genetic markers in patients with FCD in different ethnic populations.

Methods

MEDLINE and EMBASE were searched for eligible genetic studies on TCF4 and PTPRG in FCD. Odds ratios (OR) and 95% confidence intervals (CI) of each single-nucleotide polymorphism (SNP) in allelic, dominant and recessive models were estimated using fixed-effect model if I²<50% in the test for heterogeneity, otherwise the random effects model was used.

Results

Thirty-three records were obtained, with 8 being suitable for meta-analysis, which included five SNPs in TCF4 and two in PTPRG. There were 1610 FCD patients and 1565 controls tested for TCF4 rs613872. This SNP was strongly associated with FCD in Caucasians (P = 5.0×10⁻¹⁰⁶), with the risk allele G conferring an OR of 3.95 (95% CI: 3.49–4.46). A further 4 TCF4 SNPs (rs17595731, rs2286812, rs618869 and rs9954153) were also significantly associated with FCD in Caucasians (P<10⁻⁸). However, we found no SNP associated with FCD in Chinese. In addition, there was no significant association between FCD and PTPRG.

Conclusion

TCF4 rs613872 is strongly associated with FCD in Caucasians but not in Chinese, which may suggest ethnic diversity in FCD SNP associations. SNPs in PTPRG were not associated with FCD in Caucasians or Chinese populations. Results of this meta-analysis indicate the need for larger-scale and multi-ethnic genetic studies on FCD to further explore the associated gene variants and their roles on the mechanism and genetic basis of FCD.     

内蒙古多伦县土地沙漠化景观格局变化特征

利用景观分析软件Fragstats 3.3和内蒙古多伦县1960、1975、1987、1995、2000、2005年6期遥感影像解译结果,分析了1960—2005年间土地沙漠化景观格局变化.结果表明:1960—1995年间研究区土地沙漠化面积呈先增后减趋势,总沙漠化面积增加212.70km2,沙漠化斑块数先增多后减少,景观多样性和均匀性上升,轻度、中度、重度沙漠化斑块形状趋向简单;1995—2005年间研究区沙漠化斑块数大幅增加,景观多样性和均匀性下降,轻度、中度、重度沙漠化斑块形状趋向复杂;严重沙漠化斑块形状在1960年以后一直趋向复杂化.整个景观在研究期间表现为完整-破碎-完整-破碎的趋势,由轻度到严重沙漠化,其景观类型的破碎化程度逐渐降低.     

Ypsilorchis and Ypsilorchidinae,a new genus and a new subtribe of Orchidaceae

A new orchid genus, Ypsilorchis Z. J. Liu, S. C. Chen & L. J. Chen, is established based on Ypsilor-chis fissipetala (Finet) Z. J. Liu, S. C. Chen & L. J. Chen (basionym: Liparis fissipetala Finet). The new genus differs from Liparis and its allies by having two granular-waxy pollinia each with a somewhat elastic caudicle, deeply bilobed petals and strongly crisped-margined leaves with an apical awn to 1 mm long. These features are an indication of its distant relation to the members of the subtribe Liparidinae, and thus a new subtribe, Ypsilor-chidinae Z. J. Liu, S. C. Chen & L. J. Chen, is proposed.     

百里香无性系的克隆生长特征

植物克隆生长及其与生态适应性的关系是当今植物种群生态学研究的热点和前沿课题,但目前小半灌木克隆生长的研究开展不多。百里香(Thymus serpyllum var. asiaticus)是一种具有地面匍匐茎的草本状小半灌木,可在土壤侵蚀剧烈、基岩大面积裸露的砒砂岩区形成百里香单优群落,在维持生态系统稳定方面具有重要的生态学作用。皇甫川流域是砒砂岩大面积分布的典型区域,在这一地区对百里香无性系的克隆生长进行研究,不仅具有重要的学术价值,而且在生态环境建设方面也具有一定的现实意义。在皇甫川流域选择含三级分株的百里香无性系,对其各级分株的总生物量、各构件生物量及数量、各构件生物量占总生物量的百分比及其月变化进行了研究。结果表明: 1)母株与子代相比,在总生物量、构件生物量及数量上占有绝对优势,而且具有体型大、结构复杂的特点; 2)对生物量分配格局的研究显示,母株根的生物量在总生物量中所占的比例最大,其叶所占的比例较低。子代叶的生物量在总生物量中所占的比例最大,其根所占的比例较低;3)不同级别分株在生物量分配上的差异,揭示了相互连接的分株在功能上的差别,母株可能更侧重于养分和水分的吸收,子株则更侧重于光合生产;4)构件枝、茎、花生物量分配比月变化显示,子1代各构件的生长规律与母株的基本一致,子2代与母株和子1代的相比差异较大,分析认为这可能是分株间不同程度的生理整合作用造成的结果。