Inhibitory effect of α-ketoglutaric acid on α-glucosidase: integrating molecular dynamics simulation and inhibition kinetics

Abstract

The inhibition of α-glucosidase is used as a key clinical approach to treat type 2 diabetes mellitus and thus, we assessed the inhibitory effect of α-ketoglutaric acid (AKG) on α-glucosidase with both an enzyme kinetic assay and computational simulations. AKG bound to the active site and interacted with several key residues, including ASP68, PHE157, PHE177, PHE311, ARG312, TYR313, ASN412, ILE434 and ARG439, as detected by protein–ligand docking and molecular dynamics simulations. Subsequently, we confirmed the action of AKG on α-glucosidase as mixed-type inhibition with reversible and rapid binding. The relevant kinetic parameter IC₅₀ was measured (IC₅₀ = 1.738?±?0.041?mM), and the dissociation constant was determined (K_{i Slope} = 0.46?±?0.04?mM). Regarding the relationship between structure and activity, a high AKG concentration induced the slight modulation of the shape of the active site, as monitored by hydrophobic exposure. This tertiary conformational change was linked to AKG inhibition and mostly involved regional changes in the active site. Our study provides insight into the functional role of AKG due to its structural property of a hydroxyphenyl ring that interacts with the active site. We suggest that similar hydroxyphenyl ring-containing compounds targeting key residues in the active site might be potential α-glucosidase inhibitors. Abbreviations AKG alpha-ketoglutaric acid

pNPG 4-nitrophenyl-α-d-glucopyranoside

ANS 1-anilinonaphthalene-8-sulfonate

MD molecular dynamics.

Communicated by Ramaswamy H. Sarma     

我国HEV废旧镍氢电池包中稀贵金属资源化利用环境效益分析

废旧动力电池包中含有丰富的镍、钴、稀土等稀贵金属,其资源化利用是实现混合动力汽车(Hybrid Electrical Vehicle,简称HEV)全生命周期绿色化管理的重要内容之一。随着HEV的不断发展,动力电池包在未来几年将逐渐进入批量报废阶段,其资源化利用的环境效益成为值得关注的问题。鉴于此,以丰田混合动力汽车镍氢电池包为研究对象,利用GREET模型和LIME值法测算出,相比于原生矿开采,单位废旧镍氢电池包中稀贵金属资源化利用所产生的环境效益为1083元;根据报废周期,对我国市场上现存的HEV镍氢电池包的未来报废情况进行预测。结果表明,这些电池包将从2018年开始迎来报废,在2021年达到报废高峰,至2024年基本完成报废;预计其稀贵金属资源化利用的环境效益,可累计达9421万元。提出了加强废旧动力电池回收体系和资源化利用体系建设的政策建议。     

The direct effect of estrogen on cell viability and apoptosis in human gastric cancer cells

Epidemiology researches indicated that gastric cancer is a male-predominant disease; both expression level of estrogen and expression pattern of estrogen receptors (ERs) influence its carcinogenesis. But the direct effect of estrogen on gastric cancer cells is still unclear. This study aimed to explore the direct effect of β-estradiol (E2) on gastric cancer cells. SGC7901 and BGC823 were treated with a serial of concentrations of E2. The survival rates of both the cell lines were significantly reduced, and the reduction of viability was due to apoptosis triggered by E2 treatment. Caspase 3 was activated in response to the increasing E2 concentration in both SGC7901 and BGC823. Cleaved Caspase 3 fragments were detected, and the expression levels of Bcl-2 and Bcl-xL were reduced. Apoptosis was further confirmed by flow cytometry. The expression level of PEG10, an androgen receptor target gene, was reduced during E2 treatment. Both ERα and ERβ were expressed in these cell lines, and the result of bioinformatics analysis of gastric cancer from GEO datasets indicated that the expression levels of both ERα and ERβ were significantly higher in noncancerous gastric tissues than in gastric cancer tissues. Our research indicated that estrogen can reduce cell viability and promote apoptosis in gastric cancer cells directly; ERs expression level is associated with gastric cancer. Our research will help to understand the mechanism of gender disparity in gastric cancer.     

Cell origins and diagnostic accuracy of interleukin 27 in pleural effusions

The objective of the present study was to investigate the presence of interleukin (IL)-27 in pleural effusions and to evaluate the diagnostic significance of pleural IL-27. The concentrations of IL-27 were determined in pleural fluids and sera from 68 patients with tuberculous pleural effusion, 63 malignant pleural effusion, 22 infectious pleural effusion, and 21 transudative pleural effusion. Flow cytometry was used to identify which pleural cell types expressed IL-27. It was found that the concentrations of pleural IL-27 in tuberculous group were significantly higher than those in malignant, infectious, and transudative groups, respectively. Pleural CD4(+) T cells, CD8(+) T cells, NK cells, NKT cells, B cells, monocytes, macrophages, and mesothelial cells might be the cell sources for IL-27. IL-27 levels could be used for diagnostic purpose for tuberculous pleural effusion, with the cut off value of 1,007 ng/L, IL-27 had a sensitivity of 92.7% and specificity of 99.1% for differential diagnosing tuberculous pleural effusion from non-tuberculous pleural effusions. Therefore, compared to non-tuberculous pleural effusions, IL-27 appeared to be increased in tuberculous pleural effusion. IL-27 in pleural fluid is a sensitive and specific biomarker for the differential diagnosing tuberculous pleural effusion from pleural effusions with the other causes.     

黄土高原雨水集聚深层入渗(RWCI)系统下山地果园土壤水分时空变异特征

水资源短缺是影响黄土高原雨养农业发展的关键性因素,雨水资源开发是缓解该地区水资源短缺的有效措施.本研究利用管式 TDR 系统监测21年红富士老果园0～300 cm土层土壤含水率变化,分析了雨水集聚深层入渗(RWCI)系统下黄土高原旱作山地果园土壤水分时空分布特征.结果表明: RWCI系统能够显著增加果园土壤含水率,特别是40～80 cm土层(土壤含水率低值区)土壤含水率,在该区域,不同设计深度(40、60和80 cm)RWCI处理(RWCI₄₀、RWCI₆₀和RWCI₈₀)年均土壤含水率分别较鱼鳞坑(CK)处理提高75.3%、85.4%和62.4%,分别较裸露坡地(BS)处理提高39.2%、47.2%和29.1%.RWCI₄₀、RWCI₆₀和RWCI₈₀处理土壤水分入渗最大深度分别为80、120和180 cm,显著深于CK处理(60 cm),其中土壤水分变化幅度最大的土层分别主要发生在0～60、0～100和0～120 cm.在果树整个生育期内,RWCI处理土壤平均含水率(0～300 cm)以RWCI₈₀处理最大,其次是RWCI₄₀和RWCI₆₀处理.总体来看,RWCI系统是黄土高原实现雨水资源化和农业高效用水的有效措施.