Ten polymorphic tetranucleotide microsatellite markers isolated from the Anolis roquet series of Caribbean lizards

The Anolis roquet series of Caribbean lizards provides natural replicates with which to examine the role of historical contingency and ecological determinism in shaping evolutionary patterns. Here, we describe 10 polymorphic tetranucleotide microsatellites to facilitate studies on population differentiation and gene flow. All loci successfully amplified in several species from this series. Genotyping 96 individuals from two A. roquet populations demonstrated the markers’ suitability as population genetic markers: genetic diversity was high (9–22 alleles per locus); there were no instances of linkage disequilibrium; and, with one exception, all genotypic frequencies conformed to Hardy–Weinberg equilibrium expectations.     

The roles of allopatric divergence and natural selection in quantitative trait variation across a secondary contact zone in the lizard Anolis roquet

Populations of the Caribbean lizard, Anolis roquet, are thought to have experienced long periods of allopatry before recent secondary contact. To elucidate the effects of past allopatry on population divergence in A. roquet, we surveyed parallel transects across a secondary contact zone in northeastern Martinique. We used diagnostic molecular mitochondrial DNA markers to test fine‐scale association of mitochondrial DNA lineage and geological region, multivariate statistical techniques to explore quantitative trait pattern, and cline fitting techniques to model trait variation across the zone of secondary contact. We found that lineages were strongly associated with geological regions along both transects, but quantitative trait patterns were remarkably different. Patterns of morphological and mitochondrial DNA variation were consistent with a strong barrier to gene flow on the coast, whereas there were no indications of barriers to gene flow in the transitional forest. Hence, the coastal populations behaved as would be predicted by an allopatric model of divergence in this complex, while those in the transitional forest did not, despite the close proximity of the transects and their shared geological history. Patterns of geographical variation in this species complex, together with environmental data, suggest that on balance, selection regimes on either side of the secondary contact zone in the transitional forest may be more convergent, while those either side of the secondary contact zone on the coast are more divergent. Hence, the evolutionary consequences of allopatry may be strongly influenced by local natural selection regimes.     

Microsatellite markers in Carica papaya L.: isolation,characterization and transferability to Vasconcellea species

A dinucleotide microsatellite‐enriched genomic library was obtained from Carica papaya L. Sixty‐nine microsatellites were evaluated on three genotypes of C. papaya and seven species of the neighbour genus Vasconcellea. Among them, 45 markers were characterized on a sample of 29 accessions of C. papaya from the Caribbean region and 11 accessions of Vasconcellea from the Andes of Colombia and Ecuador. Twenty‐four gave polymorphism in C. papaya and only four among the seven species of Vasconcellea, confirming the divergence between both genera.     

Detecting the impact of oceano-climatic changes on marine ecosystems using a multivariate index: The case of the Bay of Biscay (North Atlantic-European Ocean)

Large‐scale univariate climate indices (such as NAO) are thought to outperform local weather variables in the explanation of trends in animal numbers but are not always suitable to describe regional scale patterns. We advocate the use of a Multivariate Oceanic and Climatic index (MOCI), derived from ‘synthetic’ and independent variables from a linear combination of the total initial variables objectively obtained from Principal Component Analysis. We test the efficacy of the index using long‐term data from marine animal populations. The study area is the southern half of the Bay of Biscay (43°–47°N; western Europe). Between 1974 and 2000 we monitored cetaceans and seabirds along 131000 standardized line transects from ships. Fish abundance was derived from commercial fishery landings. We used 44 initial variables describing the oceanic and atmospheric conditions and characterizing the four annual seasons in the Bay of Biscay. The first principal component of our MOCI is called the South Biscay Climate (SBC) index. The winter NAO index was correlated to this SBC index. Inter‐annual fluctuations for most seabird, cetacean and fish populations were significant. Boreal species (e.g. gadiformes fish species, European storm petrel and Razorbill …) with affinities to cold temperate waters declined significantly over time while two (Puffin and Killer Whale) totally disappeared from the area during the study period. Meridional species with affinities to hotter waters increased in population size. Those medium‐term demographic trends may reveal a regime shift for this part of the Atlantic Ocean. Most of the specific observed trends were highly correlated to the SBC index and not to the NAO. Between 40% and 60% of temporal variations in species abundance were explained by the multivariate SBC index suggesting that the whole marine ecosystem is strongly affected by a limited number of physical parameters revealed by the multivariate SBC index. Aside the statistical error of the field measurements, the remaining variation unexplained by the physical characteristics of the environment correspond to the impact of anthropogenic activities such overfishing and oil‐spills.     

Origins of irruptive migrations by Common Crossbills Loxia curvirostra into northwestern Europe revealed by stable isotope analysis

We used analyses of stable hydrogen isotope (δ²H) measurements in Common Crossbill feathers (δ²H_f) to infer the region of origin of Crossbills collected from different irruptions into Britain, Iceland and the Faeroes, comparing these values with those from birds sampled in breeding areas in Britain and elsewhere in the western Palaearctic. No differences in δ²H_f values were found between different species or sexes of Crossbills that could be presumed to have grown their feathers in the same region, but juveniles had lower δ²H_f values than adults that had grown their feathers in the same region. On the basis mainly of museum skins, immigrant birds were sampled from 30 different irruption years, spanning the period 1866–2009, with annual samples varying from one to 29 individuals. The variation in δ²H_f values within irruptions was substantially less than the variation between irruptions, indicating that irruptions in different years originated in different parts of the western Palaearctic boreal zone. Birds with lower δ²H_f values tended to arrive later in the migration season, which was consistent with the idea that they had travelled further. In 17 of the irruption years, the birds had mean δ²H_f values more than ?120‰, suggesting that they had originated somewhere in the region extending from northern Scandinavia to northwestern Russia. In these years the birds arrived early, in June and July. In 10 of the irruption years, the mean δ²H_f values were between ?120 and ?130‰, suggesting origins further east, in northern Russia, east of Archangel (about 40°E). In only three of the 30 years (1898, 2002, 2009) the mean δ²H_f values were even lower (< 130‰), and these birds arrived in late July, August and September. Birds in these three irruptions had probably come from Siberia, east of the Ural Mountains. In at least three irruption years (1898, 1927, 1985) the observed range of δ²H_f values suggested that birds had come from more than one of these regions, including east of the Urals in 1898 and 1927.