人金属硫蛋白在乳酸菌中的融合表达及其预防食源性镉污染的应用

目的:镉(Cd)是一种重要的环境污染物,其具有半衰期长、不能生物降解等特性使之易于在人体重要脏器中蓄积并对人身体健康造成不可逆的损伤。为此,减少镉的摄入,尤其是经胃肠道,是预防人体慢性镉中毒的有效方法。方法:构建以α-半乳糖苷酶作为筛选标记、表达金属硫蛋白融合蛋白(GST-SUMO-MT)的重组乳酸乳球菌MG1363/p M-GSMT。原子吸收光谱法分析重组乳酸菌对Cd~(2+)和Zn~+的结合能力。以灌胃方式,对雄性Sprague-Dawley大鼠每天口服不同剂量的重组乳酸菌(2×10~9~2×10~(11)CFU/d)及CdCl_2溶液[5mg/(kg·d)],连续处理56天。收集实验动物肝、肾、脑及睾丸,利用原子吸收光谱法检测这些脏器中镉离子的含量。生化分析检测血清中尿素及丙氨酸转氨酶的含量。石蜡切片及苏木精-伊红染色分析各组织的病理变化。结果:获得不含抗生素抗性的重组乳酸菌MG1363/p M-GSMT,其吸附Cd~(2+)、Zn~(2+)能力比对照组分别提高3.52倍和1.60倍。动物实验结果显示,镉能在肝、肾、脑及睾丸中蓄积,并对这些器官造成明显的病理损伤。原子吸收光谱分析、血清生化指标及病理切片结果都显示,重组乳酸菌能有效降低胃肠道中镉的摄入,进而减少Cd~(2+)在各脏器中的蓄积及对器官功能的损伤。结论:为预防人体食源性慢性镉中毒提供了一种有效的生物材料和使用方法。     

Microbial community responses reduce soil carbon loss in Tibetan alpine grasslands under short‐term warming

Changes in labile carbon (LC) pools and microbial communities are the primary factors controlling soil heterotrophic respiration (R_h) in warming experiments. Warming is expected to initially increase R_h but studies show this increase may not be continuous or sustained. Specifically, LC and soil microbiome have been shown to contribute to the effect of extended warming on R_h. However, their relative contribution is unclear and this gap in knowledge causes considerable uncertainty in the prediction of carbon cycle feedbacks to climate change. In this study, we used a two‐step incubation approach to reveal the relative contribution of LC limitation and soil microbial community responses in attenuating the effect that extended warming has on R_h. Soil samples from three Tibetan ecosystems—an alpine meadow (AM), alpine steppe (AS), and desert steppe (DS)—were exposed to a temperature gradient of 5–25°C. After an initial incubation period, soils were processed in one of two methods: (a) soils were sterilized then inoculated with parent soil microbes to assess the LC limitation effects, while controlling for microbial community responses; or (b) soil microbes from the incubations were used to inoculate sterilized parent soils to assess the microbial community effects, while controlling for LC limitation. We found both LC limitation and microbial community responses led to significant declines in R_h by 37% and 30%, respectively, but their relative contributions were ecosystem specific. LC limitation alone caused a greater R_h decrease for DS soils than AMs or ASs. Our study demonstrates that soil carbon loss due to R_h in Tibetan alpine soils—especially in copiotrophic soils—will be weakened by microbial community responses under short‐term warming.     

Identification and Characterization of Novel MicroRNAs from Schistosoma japonicum

Background

Schistosomiasis japonica remains a major public health problem in China. Its pathogen, Schistosoma japonicum has a complex life cycle and a unique repertoire of genes expressed at different life cycle stages. Exploring schistosome gene regulation will yield the best prospects for new drug targets and vaccine candidates. MicroRNAs (miRNAs) are a highly conserved class of noncoding RNA that control many biological processes by sequence-specific inhibition of gene expression. Although a large number of miRNAs have been identified from plants to mammals, it remains no experimental proof whether schistosome exist miRNAs.

Methodology and Results

We have identified novel miRNAs from Schistosoma japonicum by cloning and sequencing a small (18–26 nt) RNA cDNA library from the adult worms. Five novel miRNAs were identified from 227 cloned RNA sequences and verified by Northern blot. Alignments of the miRNAs with corresponding family members indicated that four of them belong to a metazoan miRNA family: let-7, miR-71, bantam and miR-125. The fifth potentially new (non conserved) miRNA appears to belong to a previously undescribed family in the genus Schistosome. The novel miRNAs were designated as sja-let-7, sja-miR-71, sja-bantam, sja-miR-125 and sja-miR-new1, respectively. Expression of sja-let-7, sja-miR-71 and sja-bantam were analyzed in six stages of the life cycle, i.e. egg, miracidium, sporocyst, cercaria, schistosomulum, and adult worm, by a modified stem-loop reverse transcribed polymerase chain reaction (RT-PCR) method developed in our laboratory. The expression patterns of these miRNAs were highly stage-specific. In particular, sja-miR-71 and sja-bantam expression reach their peaks in the cercaria stage and then drop quickly to the nadirs in the schistosomulum stage, following penetration of cercaria into a mammalian host.

Conclusions

Authentic miRNAs were identified for the first time in S. japonicum, including a new schistosome family member. The different expression patterns of the novel miRNAs over the life stages of S. japonicum suggest that they may mediate important roles in Schistosome growth and development.     

根茎禾草沙鞭的克隆基株及分株种群特征

 在内蒙古沙地站对根茎禾草沙鞭的观测实验发现,沙鞭具有规则的克隆生长、“游击型”克隆构型和相当快的克隆扩展。其地下根茎的寿命至少2年。这些发现指示着该植物种可能具有很强的克隆整合。对内蒙古沙地站和内蒙古草原站的单种沙鞭分株种群的比较和在各站对单种和混交沙鞭分株种群的比较发现,不同地点和在不同群落条件下的沙鞭分株种群在许多重要性状上都存在差异。这些结果暗示着克隆可塑性对沙鞭生态适应性的可能贡献。关于沙鞭克隆整合和克隆可塑性的进一步研究是必要的。     

拟夏孢锈属（Uredinopsis）新记录种

采到骨状拟夏孢锈（Ｕｒｅｄｉｎｏｐｓｉｓ ｏｓｓｉｆｏｒｍｉｓ Ｋａｍｅｉ）为中国新记录种。     

The mating system and gene dynamics of plateau pikas

Evolutionary theory suggests that mating systems should have substantial effects on gene dynamics of local populations. In polygynous species, local 'breeding groups' may produce significant genetic structure, due to genetic differences among groups, and rate of loss of genetic variation from such populations may be considerably slowed. We examined possible influences of the variable mating system and family group structure on genetic properties of a population of plateau pikas (Ochotona curzoniae). Pika gene dynamics were examined via F-statistics and effective population sizes (N(e)), calculated from genetic correlations within and among individuals and families. Genetic correlations were estimated from mating patterns, population demography, and dispersal patterns. Substantial genetic structure within the population was indicated by a strongly positive F(LS). Genetic influence of natal dispersal out of pika families was indicated by a strongly negative inbreeding statistic (F(IL)=-0.34). Effective size of the population was not greatly different from the census population, whereas a traditional estimate of effective size of the population was much lower, indicating that the family structure of the pikas results in a slowed loss of genetic variation over time. Thus, even though mating patterns of plateau pikas were variable, family structure had a strong influence on pika gene dynamics.     

Breast milk contains probiotics with anti-infantile diarrhoea effects that may protect infants as they change to solid foods

Infants often experience complementary food-induced diarrhoea (CFID), which occurs when infants switch from breast milk to solid foods. The relative abundances of Prevotella and Rothia were higher in stools of infants with CFID, while the relative abundances of Enterococcus and Escherichia were higher in healthy infants. The abundance of Lactobacillus spp. normally found in breast milk fed to infants with CFID was significantly reduced, and Enterococcus spp. were less abundant when diarrhoea occurred. Furthermore, Lactobacillus and Enterococcus were present as shared bacteria in both mother and infant, and they were considered potential anti-CFID probiotics as their relative abundances in breast milk were negatively correlated to infant CFID. Kyoto encyclopedia of genes and genomes (KEGG) functional analysis showed that the function of amino acid metabolism differed between infants with CFID and healthy infants. Therefore, CFID might be related to the decomposition of proteins in food supplements. The screening revealed seven hydrolytic casein and five hydrolytic casein and rice protein isolates from 320 suspected Lactobacillus and Enterococcus isolates. The animal experiments demonstrated that a mixture of five isolates effectively hydrolysed the casein and rice protein and prevented diarrhoea in young rats. Thus, the occurrence of CFID was found to be closely related to the intestinal and breast milk microbiota, and bacteria that could assist in the digestion of cereal proteins were involved in CFID.     

Phosphorylation and nuclear localization of the varicella-zoster virus gene 63 protein.

The protein encoded by varicella-zoster virus open reading frame 63 and carboxy-terminal deletions of the same were expressed either as fusion proteins at the carboxy terminus of the maltose-binding protein in Escherichia coli or independently in transfected mammalian cells. The truncations contained amino acids 1 to 142 (63 delta N) or 1 to 210 (63 delta K) of the complete 278-amino-acid primary sequence. Recombinant casein kinase II phosphorylated the 63F and 63 delta KF fusion proteins in vitro but did not phosphorylate the 63 delta NF fusion protein, implying that phosphorylation occurred between amino acids 142 and 210. Immunoprecipitation of 35S- or 32P-labelled extracts of cells transfected with plasmids expressing 63, 63 delta N, or 63 delta K also indicated that in situ phosphorylation most likely occurred between amino acids 142 and 210. These combined results suggest that casein kinase II plays a significant role in the phosphorylation of the varicella-zoster virus 63 protein. Indirect immunofluorescence of transfected cells indicated nuclear localization of the 63 protein and cytoplasmic localization of 63 delta K and 63 delta N, implying a requirement for sequences between amino acids 210 and 278 for efficient nuclear localization.     

Leaf surface factors of transgenic Bt cotton associated with the feeding behaviors of cotton aphids: A case study on non-target effects

The present paper reports case study results of the risk assessment of transgenic Bt cotton on a non-target pest, cotton aphid, Aphis gossypii. Several types of techniques, i.e., electrical penetration graph (EPG), light and electron microscopy, bioassays and chemical analysis, were applied to investigate physical and chemical leaf factors of 2 transgenic Bt cotton lines (GK12 and GK19) and their pa-rental non-Bt cotton line (Simian3) associated with searching and feeding behaviors of cotton aphids on leaves or leaf extracts of cotton plants. EPG results showed that there were some differences among behaviors of cotton aphids on 2 Bt cotton and 1 non-Bt cotton lines. Cotton aphids performed similarly to leaf surface extracts from 3 cotton lines; and leaf surface chemicals, mainly volatiles and waxes, were almost identical in the components and concentrations among the cotton lines. However, three cotton lines were quite different from each other in the densities of certain kinds of covering trichomes. Therefore, the relationships between the physical characteristics and the searching behaviors of cotton aphids on the three cotton lines were constructed as the regression equations. Glandular trichomes and covering trichomes with 5 branches influenced the cotton aphids' searching behaviors effectively; and other trichomes with other branches affected aphids in varying ways. These results demonstrated that leaf surface physical factors of transgenic Bt cotton lines different from their parental non-Bt line could affect the penetration behaviors of non-target cotton aphids. Cotton aphids penetrate and feed more easily on two Bt cotton lines than on the non-Bt cotton line.     

SARS冠状病毒M蛋白的生物信息学研究

针对GenBank上发布的来自不同国家地区的39条SARSCoV推测M蛋白,采用生物信息学软件分析其核酸和氨基酸序列,获得其分子生物学特征,确定突变位点,预测功能结构区、Motif及抗原决定簇,比较基因突变对这些功能结构的影响.结果表明:在39个病毒株M蛋白的666 bp中,共有18个病毒株在7个位点上发生了25次变异.在M蛋白序列上预测获得3个跨膜螺旋序列和一个可能的信号肽序列.氨基酸序列的变异主要发生在其跨膜和胞外区域,胞内区域相对较少.预测发现12个Motif和7个抗原决定簇.提示突变对M蛋白的结构功能区的影响不大,也未造成M蛋白的Motif的数量和构成发生改变.对抗原决定簇的影响也主要体现在序列成分构成的改变上,在设计疫苗时,应考虑由其导致的抗原特性改变.