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131.
Tihomir Todorov Albena Todorova Bilyana Georgieva Vanyo Mitev 《Molecular biotechnology》2010,45(2):150-154
We report on a unified rapid betaine-based-PCR protocol for amplification of the (CAG)n region in Huntington disease (HD) and the (CGG)n region in Fragile X syndrome (FXS), followed by an electrophoretic separation on automated sequencer for precise determination
of the triplet numbers. The high betaine concentration (2.5 M betaine) permits precise amplification of the CAG and CGG repeats.
Ten HD affected patients and 10 healthy individuals from HD families were re-evaluated. For FXS the CGG region in normal individuals
and premutations of about 100 repeats were precisely amplified by this protocol. Ten unrelated FXS premutation carriers and
24 mentally retarded non-FXS affected boys were re-examined by this method. The results totally coincided with the previous
ones. This protocol is a good choice as a fast screening test. Within 24 h we can have preliminary information on the patient’s
genetic status. Normal individuals, CGG premutation carriers up to 100 repeats, as well as HD patients carrying an expansion
up to 50 CAG repeats can be easily clarified. This accounts for a relatively large proportion (about 90%) of the suspected
HD and FXS patients, referred to our laboratory for genetic analysis. The calculation of the repeat’s number is more accurate
for the correct interpretation of the results, screening tests and genetic counselling. 相似文献
132.
The family of flaviviruses is one of the most medically important groups of emerging arthropod-borne viruses. Host cell cytoskeletons have been reported to have close contact with flaviviruses during virus entry, intracellular transport, replication, and egress process, although many detailed mechanisms are still unclear. This article provides a brief overview of the function of the most prominent flaviviruses-induced or-hijacked cytoskeletal structures including actin, microtubules and intermediate filaments, mainly focus on infection by dengue virus, Zika virus and West Nile virus. We suggest that virus interaction with host cytoskeleton to be an interesting area of future research. 相似文献
133.
Antoine Wystrach Sebastian Schwarz Patrick Schultheiss Guy Beugnon Ken Cheng 《Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology》2011,197(2):167-179
The Australian desert ant Melophorus bagoti often follows stereotypical routes through a cluttered landscape containing both distant panoramic views and obstacles (plants)
to navigate around. We created an artificial obstacle course for the ants between a feeder and their nest. Landmarks comprised
natural objects in the landscape such as logs, branches, and tussocks. Many ants travelled stereotypical routes home through
the obstacle course in training, threading repeatedly the same gaps in the landmarks. Manipulations altering the relations
between the landmarks and the surrounding panorama, however, affected the routes in two major ways. Both interchanging the
positions of landmarks (transpositions) and displacing the entire landmark set along with the starting position of the ants
(translations) (1) reduced the stereotypicality of the route, and (2) increased turns and meanders during travel. The ants
might have used the entire panorama in view-based travel, or the distal panorama might prime the identification and use of
landmarks en route. Despite the large data set, both options (not mutually exclusive) remain viable. 相似文献
134.
135.
Owing to the exceptional intracellular distribution and the heterogeneous expression pattern during transformation and metastasis
in various tumors, the EF-hand calcium-binding protein S100A2 attracts increasing attention. Unlike the majority of S100 proteins,
S100A2 expression is downregulated in many cancers and the loss in nuclear expression has been associated with poor prognosis.
On the other hand, S100A2 is upregulated in some cancers. This mini review highlights the general characteristics of S100A2
and discusses recent findings on its putative functional implication as a suppressor or promoter in cancerogenesis. 相似文献
136.
Ratul Saha Robert S. Donofrio Susan T. Bagley 《Journal of industrial microbiology & biotechnology》2010,37(8):843-848
A TaqMan quantitative real-time polymerase chain reaction (qPCR) assay was developed for the detection and enumeration of
three Pseudomonas species belonging to the mendocina sublineage (P. oleovorans, P. pseudoalcaligenes, and P. oleovorans subsp. lubricantis) found in contaminated metalworking fluids (MWFs). These microbes are the primary colonizers and serve as indicator organisms
of biodegradation of used MWFs. Molecular techniques such as qPCR are preferred for the detection of these microbes since
they grow poorly on typical growth media such as R2A agar and Pseudomonas isolation agar (PIA). Traditional culturing techniques not only underestimate the actual distribution of these bacteria but
are also time-consuming. The primer–probe pair developed from gyrase B (gyrB) sequences of the targeted bacteria was highly sensitive and specific for the three species. qPCR was performed with both
whole cell and genomic DNA to confirm the specificity and sensitivity of the assay. The sensitivity of the assay was 101 colony forming units (CFU)/ml for whole cell and 13.7 fg with genomic DNA. The primer–probe pair was successful in determining
concentrations from used MWF samples, indicating levels between 2.9 × 103 and 3.9 × 106 CFU/ml. In contrast, the total count of Pseudomonas sp. recovered on PIA was in the range of <1.0 × 101 to 1.4 × 105 CFU/ml for the same samples. Based on these results from the qPCR assay, the designed TaqMan primer–probe pair can be efficiently
used for rapid (within 2 h) determination of the distribution of these species of Pseudomonas in contaminated MWFs. 相似文献
137.
138.
139.
Felix Roosen-Runge Marcus Hennig Tilo Seydel Fajun Zhang Maximilian W.A. Skoda Stefan Zorn Robert M.J. Jacobs Marco Maccarini Peter Fouquet Frank Schreiber 《Biochimica et Biophysica Acta - Proteins and Proteomics》2010,1804(1):68-75
We report on a combined cold neutron backscattering and spin-echo study of the short-range and long-range nanosecond diffusion of the model globular protein bovine serum albumin (BSA) in aqueous solution as a function of protein concentration and NaCl salt concentration. Complementary small angle X-ray scattering data are used to obtain information on the correlations of the proteins in solution. Particular emphasis is put on the effect of crowding, i.e. conditions under which the proteins cannot be considered as objects independent of each other. We thus address the question at which concentration this crowding starts to influence the static and in particular also the dynamical behaviour. We also briefly discuss qualitatively which charge effects, i.e. effects due to the interplay of charged molecules in an electrolyte solution, may be anticipated. Both the issue of crowding as well as that of charge effects are particularly relevant for proteins and their function under physiological conditions, where the protein volume fraction can be up to approximately 40% and salt ions are ubiquitous. The interpretation of the data is put in the context of existing studies on related systems and of existing theoretical models. 相似文献
140.
Matthew W. Mitchell Sabrina Locatelli Ekwoge E. Abwe Lora Ghobrial Mary Katherine Gonder 《International journal of primatology》2018,39(4):581-601
Complex ecological pressures affect the social dynamics of many primate species, but it is unclear how they affect primate speciation. Molecular tools are often used to answer questions about the evolutionary histories and social systems of primates. Mitochondrial DNA (mtDNA), in particular, is frequently used to answer many of these questions, but because it is passed from mothers to offspring it reveals only the histories of females. In many species, including chimpanzees, females generally disperse from their natal groups while males are philopatric, and thus differences in dispersal patterns likely leave different signatures in the genome. We previously analyzed samples from 187 unrelated male and female chimpanzees in Nigeria and Cameroon using 21 autosomal microsatellites and mtDNA sequences. Here, we examine the contributions of males and females in shaping the genetic history of these chimpanzees by genotyping a subset of 56 males at 12 Y-chromosome microsatellites. We found that Y-chromosome population structure differed from the results of analysis of mtDNA haplotypes. The results also revealed that males in rainforest habitats (Guinean and Congolian rainforests) are more closely related to one another than those inhabiting the savanna-woodland mosaic ecotone in central Cameroon. In contrast, the pattern of female relatedness did not differ across habitats. We hypothesize that these differences in population structure and patterns of relatedness among males in different habitat types may be due to differences in the community dynamics of chimpanzees in the ecotone vs. rainforests, and that these factors contribute to making Cameroon an engine of diversification for chimpanzees. Broadly, these results demonstrate the importance of habitat variation in shaping social systems, population genetics, and primate speciation. 相似文献