溶藻弧菌群体基因组学研究

溶藻弧菌(Vibrio alginolyticus)是一种能够对人类以及鱼、虾、贝类等水产品致病的弧菌,给人类健康带来威胁,也给水产养殖业造成巨大的经济损失.目前该物种基于全基因组的遗传多样性和重要遗传元件研究报道较少.本研究对采集自全国4个省份的68株溶藻弧菌进行高通量测序,获得全基因组序列,并结合113株公开发表的...     

我国23个土壤磷素淋失风险评估Ⅱ.淋失临界值与土壤理化性质和磷吸附特性的关系

从13个省（市）采取23个耕地表层土壤,通过室内模拟试验测定其磷素淋失临界值和pH、有机质、＜0.01mm、＜0.002mm、交换性钙镁、活性铁铝、磷等温吸附特性等,以建立土壤磷素淋失临界值与土壤基本理化性质和磷吸附特性之间的关系.结果表明：土壤pH＜6.0时,随土壤pH提高临界值增加,土壤pH与临界值之间呈显著的指数关系;而当土壤pH＞6.0时,随土壤pH提高临界值减小,在pH6.5左右土壤磷素淋失临界值最高.土壤磷素淋失临界值与土壤有机质、活性铁（铝）、交换性钙之间存在显著的相关,而与交换性镁、CEC、＜0.01mm、＜0.002mm、K、Qm的相关性受土壤酸碱度影响.可以通过测定土壤有机质或活性铁的含量,来计算土壤磷素淋失临界值,评价土壤磷素淋失的风险.供试的23个土壤,除了采自湖北潜江的20号水稻土存在比较大的磷素淋失风险,其余土壤发生磷素淋失的风险很小.     

In vitro eradication of abasic site-mediated DNA–peptide/protein cross-links by Escherichia coli long-patch base excision repair

Apurinic/apyrimidinic (AP or abasic) sites are among the most abundant DNA lesions. Numerous proteins within different organisms ranging from bacteria to human have been demonstrated to react with AP sites to form covalent Schiff base DNA–protein cross-links (DPCs). These DPCs are unstable due to their spontaneous hydrolysis, but the half-lives of these cross-links can be as long as several hours. Such long-lived DPCs are extremely toxic due to their large sizes, which physically block DNA replication. Therefore, these adducts must be promptly eradicated to maintain genome integrity. Herein, we used in vitro reconstitution experiments with chemically synthesized, stable, and site-specific Schiff base AP-peptide/protein cross-link analogs to demonstrate for the first time that this type of DPC can be repaired by Escherichia coli (E. coli) long-patch base excision repair. We demonstrated that the repair process requires a minimum of three enzymes and five consecutive steps, including: (1) 5′-DNA strand incision of the DPC by endonuclease IV; (2 to 4) strand-displacement DNA synthesis, removal of the 5′-deoxyribose phosphate-peptide/protein adduct-containing flap, and gap-filling DNA synthesis by DNA polymerase I; and (5) strand ligation by a ligase. We further demonstrated that endonuclease IV plays a major role in incising an AP-peptide cross-link within E. coli cell extracts. We also report that eradicating model AP-protein (11.2–36.1 kDa) DPCs is less efficient than that of an AP-peptide_10mer cross-link, supporting the emerging model that proteolysis is likely required for efficient DPC repair.     

Design,synthesis, and biological evaluation of novel carbazole derivatives as potent DNMT1 inhibitors with reasonable PK properties

The DNA methyltransferases (DNMTs) were found in mammals to maintain DNA methylation. Among them, DNMT1 was the first identified, and it is an attractive target for tumour chemotherapy. DC_05 and DC_517 have been reported in our previous work, which is non-nucleoside DNMT1 inhibitor with low micromolar IC₅₀ values and significant selectivity towards other S-adenosyl-_L-methionine (SAM)-dependent protein methyltransferases. In this study, through a process of similarity-based analog searching, a series of DNMT1 inhibitors were designed, synthesized, and evaluated as anticancer agents. SAR studies were conducted based on enzymatic assays. And most of the compounds showed strong inhibitory activity on human DNMT1, especially WK-23 displayed a good inhibitory effect on human DNMT1 with an IC₅₀ value of 5.0 µM. Importantly, the pharmacokinetic (PK) profile of WK-23 was obtained with quite satisfying oral bioavailability and elimination half-life. Taken together, WK-23 is worth developing as DNMT1-selective therapy for the treatment of malignant tumour.     

羊草草原枯枝落叶分解的研究——主要优势植物的分解速率和损失率

分解速率和损失率从不同侧面反映了枯枝落叶分解动态,羊草草原主要优势植物,羊草（Leymus chinensis),拂子茅（Calamagrostis epigejos),减蓬（Suaeda glauca),碱茅（Puccinellia tenuiflora),五脉山黎豆（Lathyrus quinqueneruivs),碱蒿（Artemisia anethifolia)分解速率的季节变化动态近似倒“V”字型,损失率的季节变化呈S型,反了枯枝落叶的失重情况,枯枝落叶的化学组成成分是造成不同种植物间分解差异的主要原因,特别是C／N比与分解快慢有密切关系,分解初期,枯枝落叶的损失符合指数衰减模型,枯枝落叶损失95％所需时间,羊草群落约为8．8a,杂类草群落约为9．7a,碱茅群落约为7．1a,碱蓬群落约为4．7a。     

线粒体ATP敏感钾通道对大鼠肺动脉平滑肌细胞低氧诱导因子-1α表达及细胞增殖的作用

本文旨在探讨线粒体ATP敏感钾（mitochondrial ATP-sensitive K＋,MitoKATP）通道对大鼠肺动脉平滑肌细胞低氧诱导因子-1α（hypoxia inducible factor-1α,HIF-1α）表达和细胞增殖的影响。原代培养大鼠肺动脉平滑肌细胞,分为常氧对照组、常氧＋diazoxide（MitoKATP通道的选择性开放剂）组、常氧＋5-hydroxydecanoate（5-HD,MitoKATP通道的选择性阻断剂）组、低氧对照组、低氧＋diazoxide组、低氧＋5-HD组,共6组,分别应用罗丹明123荧光技术检测各组大鼠肺动脉平滑肌细胞的线粒体膜电位,免疫组化检测HIF-1α的表达及酶联免疫检测仪检测细胞增殖的变化。结果显示,常氧＋ diazoxide组与常氧对照组比较,罗丹明123荧光、HIF-1α表达及细胞增殖明显增强（P〈0．05）;低氧＋diazoxide组与低氧对照组比较,罗丹明123荧光、HIF-1α表达及细胞增殖明显增强（P〈0.05）：常氧＋5-HD组与常氧对照组比较,罗丹明123荧光、HIF-1α表达、细胞增殖没有明显变化（P〉0．05）;但低氧＋5-HD组与低氧对照组比较,罗丹明123荧光明显减弱、HIF-1α表达及细胞增殖有所减弱（P〈0．05）。结果提示：MitoKATP通道的开放能引起大鼠肺动脉平滑肌细胞线粒体膜去极化,并可以促进HIF-1α的表达及细胞增殖。     

生态工程中食物链组合的环分析

本文研究了一个用于治理水体生态系统富营养化的生态工程,应用环分析方法对工程中的食物链的组合进行了分析。在这里,贝类被用于清除过量的藻类;种植水生植物改变营养的流转途径并且放养食植性鱼类,通过捕捞鱼和贝,使水体中的有机物和无机盐沿着从藻类到贝类和从水生植物到食植性鱼类两条途径由水体生态系统中输出,应用环分析的手段,可以调整生态工程中食物链的组合结构,使整个生态工程具有某种特定的功能。