锌指核酸酶技术在植物基因工程中的应用

锌指核酸酶(zinc finger nucleases,ZFNs)由3到4个锌指结构(zinc fingers,ZFs)和FokⅠ核酸内切酶的剪切结构域组成。锌指核酸酶(ZFNs)通过锌指结构(ZFs)与特异核酸位点结合,再利用FokⅠ的酶切作用切割DNA,引起特异位点DNA双链断裂(double strand break,DSB)。DNA双链断裂可以通过非同源末端连接(non-homologous end joining,NHEJ) 或同源重组(homologous recombination,HR)来修复。在修复过程中实现对基因组DNA的靶向修饰。介绍了锌指核酸酶结构、人工构建途径,作用机理和试验步骤,重点综述了锌指核酸酶技术在植物基因工程的应用。     

肾移植术后HCMV感染与淋巴细胞亚群及肾功能的相关性

目的：肾移植患者由于术前透析及术后服用免疫抑制剂,显著增加了人巨细胞病毒（Humancytomegalovirus,HCMV）原发感染和潜伏感染被激活的机会。观察HCMV感染情况与血T淋巴细胞亚群及肾功能的变化,以探讨其相关性及临床意义。方法：跟踪收集40例肾移植患者术前、术后血标本,应用RT-PCR技术检测HCMV,流式细胞术检测淋巴细胞亚群,结合肾功能判断是否发生急性排斥或移植肾功能恢复延迟。结果：肾移植术后HCMV感染率为52．5％,10例出现症状性感染（25％）,出现阳性时间35．7±15．3天。症状性感染组CD3-bCD4＋的水平和CD4＋／CD8＋的比值较无活动性感染组和正常对照组均降低,CD8＋水平较其他组升高,差异有显著性意义（P〈0．05）。无症状性活动感染者与无活动性感染者各指标比较差异无显著性。活动性感染组急性排斥或移植肾功能恢复延迟发生8例（38．1％）,无活动性感染组发生1例（5．2％）,差异具有统计学意义（x^2=6．15,P〈0．05）。结论：肾移植术后HCMV感染能显著引起T淋巴细胞亚群变化,尤其是CD4＋／CD8＋。并与急性排斥或移植肾功能恢复延迟密切相关联,在其发生发展中可能起着重要的作用。三者相互联系、相互作用、互为因果,对进一步机制的研究及临床诊断治疗、预后方面有一定意义。     

药用真菌猪苓溶血素基因克隆和序列分析

利用3'-RACE-PCR方法首次从药用真菌猪苓中克隆得到与真菌形态发育相关的溶血素基因。结果表明,猪苓溶血素基因的全长cDNA为744bp,其中编码区占447bp,共编码148个氨基酸,推测其分子量约为15.79kDa,理论等电点为4.89。推定的猪苓溶血素蛋白具有与杨树菇溶血素类蛋白家族相同的结构域和功能位点,两者同源性为60%。系统进化树结果显示猪苓溶血素隶属于担子菌类群。实时荧光定量PCR分析结果表明在菌核形成初期猪苓溶血素基因表达量较高,且显著高于菌丝体中猪苓溶血素基因的转录水平,说明溶血素基因参与了猪苓菌核的形态发育。     

Comparative Anatomy of Chromosomal Domains with Imprinted and Non-Imprinted Allele-Specific DNA Methylation

Allele-specific DNA methylation (ASM) is well studied in imprinted domains, but this type of epigenetic asymmetry is actually found more commonly at non-imprinted loci, where the ASM is dictated not by parent-of-origin but instead by the local haplotype. We identified loci with strong ASM in human tissues from methylation-sensitive SNP array data. Two index regions (bisulfite PCR amplicons), one between the C3orf27 and RPN1 genes in chromosome band 3q21 and the other near the VTRNA2-1 vault RNA in band 5q31, proved to be new examples of imprinted DMRs (maternal alleles methylated) while a third, between STEAP3 and C2orf76 in chromosome band 2q14, showed non-imprinted haplotype-dependent ASM. Using long-read bisulfite sequencing (bis-seq) in 8 human tissues we found that in all 3 domains the ASM is restricted to single differentially methylated regions (DMRs), each less than 2kb. The ASM in the C3orf27-RPN1 intergenic region was placenta-specific and associated with allele-specific expression of a long non-coding RNA. Strikingly, the discrete DMRs in all 3 regions overlap with binding sites for the insulator protein CTCF, which we found selectively bound to the unmethylated allele of the STEAP3-C2orf76 DMR. Methylation mapping in two additional genes with non-imprinted haplotype-dependent ASM, ELK3 and CYP2A7, showed that the CYP2A7 DMR also overlaps a CTCF site. Thus, two features of imprinted domains, highly localized DMRs and allele-specific insulator occupancy by CTCF, can also be found in chromosomal domains with non-imprinted ASM. Arguing for biological importance, our analysis of published whole genome bis-seq data from hES cells revealed multiple genome-wide association study (GWAS) peaks near CTCF binding sites with ASM.     

川明参果实发育过程中解剖结构的变化

对伞形科(Apiaceae)中国特有单型属种类川明参（Chuanminshen violaceum Sheh et Shan）幼果发育阶段（包含幼果期Ⅰ、幼果期Ⅱ和幼果期Ⅲ）、中果发育阶段（包含中果期Ⅰ、中果期Ⅱ和中果期Ⅲ）和熟果发育阶段（包含熟果期Ⅰ、熟果期Ⅱ和熟果期Ⅲ）果实横切面的解剖结构进行了比较观察。观察结果表明,川明参果实在果壁细胞层数和形态、果棱和维管束、油管、胚乳以及分生果横切面大小和形状等特征均有明显的变化。川明参分生果果壁由厚变薄且外果壁、中果壁细胞形态发生变化,内果壁细胞消失;果实中油管分布在果实的背面、侧面和合生面,油管不断向外扩大,在成熟果实中油管往往皱缩。川明参果实中胚乳逐渐增大,从近球形变化为桃形、肾形直至月牙形,背部呈山丘状隆起;分生果横切面的形状由近五边状圆形变化至梭形,背腹极度压扁。通过对果实发育形态解剖观察发现,果实发育前期,果形的变化主要依靠维管束的发育,从而造成果棱的改变,来改变果实外部结构。到了熟果期,胚乳显现,形体变大,它的形状变化开始改变分生果的外部形态,并且影响较为显著。     

Association of Dyslipidemia with Renal Cell Carcinoma: A 1∶2 Matched Case-Control Study

Abnormal serum lipid profiles are associated with the risk of some cancers, but the direction and magnitude of the association with renal cell carcinoma is unclear. We explore the relationship between serum lipids and renal cell carcinoma via a matched case-control study. A 1∶2-matched case-control study design was applied, where one renal cell carcinoma patient was matched to two non-renal-cell-carcinoma residents with respect to age (±0 year) and gender. Cases (n = 248) were inpatients with a primary diagnosis of renal cell carcinoma, confirmed by pathology after operations. Controls were sampled from a community survey database matched on age and gender with cases, 2 controls for each case. Stratified Cox proportional hazard regression analysis was used to obtain hazard ratios and corresponding 95% confidence intervals of lipids level and dyslipidemia for the risk of renal cell carcinoma. Elevated serum cholesterol (p<0.001), LDL cholesterol (p<0.001), and HDL cholesterol (p = 0.003) are associated with decreased hazard of renal cell carcinoma, adjusting for obesity, smoke, hypertension and diabetes. However, risk caused by hTG showed no statistical significance (p = 0.263). This study indicates that abnormal lipid profile influences the risk of renal cell carcinoma.     

不同地区田间草地贪夜蛾卵巢的结构和发育

【目的】探明田间草地贪夜蛾Spodoptera frugiperda卵巢的发育状态及其变化,为草地贪夜蛾种群的发生和迁飞动态提供精准监测依据。【方法】采用雌性生殖系统解剖法,比较不同日龄和地区的田间草地贪夜蛾雌蛾卵巢的形态差异,分析卵巢成熟状态与雌蛾交配的关系。【结果】草地贪夜蛾雌蛾生殖系统包含卵巢、输卵管、交配囊、导精管、受精囊、附腺和产卵器。根据形态特征可以将田间草地贪夜蛾卵细胞分为卵黄发生前期、卵黄期和成熟期3个时期。田间雌蛾1日龄卵巢中发育最快的卵仅处于卵黄期中期,卵巢管柄为空;3日龄卵巢出现分化,一部分卵巢仍然和1日龄相似,另一部分卵巢中存在成熟卵;这种卵巢发育分化到羽化后11 d时仍然存在。云南江城、弥勒,广西田阳以及浙江瑞安和镇海等地的田间雌蛾,到死亡时分别有61.5%, 51.7%, 41.7%, 42.1%和35.5%卵巢发育不成熟。室内饲养第1代雌蛾中,有39.6%的个体到死亡时卵巢未发育成熟,和田间雌蛾比例相似。交配雌蛾卵巢可以是发育成熟和未成熟的,但是未成熟卵巢的比例仅为18.0%±5.0%。【结论】结果提示同一代次的田间草地贪夜蛾可能同时存在迁飞和非迁飞个体,其比例随地理位置和季节发生变化。本研究的结果在一定程度上解释了单纯依据化学农药难以防治草地贪夜蛾的原因,也为田间草地贪夜蛾的迁飞监测和绿色防控提供了一定依据。