Over-expression and purification of isotopically labeled recombinant ligand-binding domain of orphan nuclear receptor human B1-binding factor/human liver receptor homologue 1 for NMR studies

The human hepatitis B virus enhancer II B1 binding factor (hB1F), which regulates the expression of hepatitis B virus genes, is identified as a nuclear receptor. It regulates several liver-specific genes and plays an important role in the bile acid biosynthesis pathway. A significantly optimized protocol has been worked out to prepare 15N and/or 13C-labeled hB1F ligand-binding domain in minimal medium with high yields for NMR studies. Under the various conditions optimized for the purification of His6-hB1F ligand-binding domain, the yield of the purified protein is estimated to be 25-30 mg from 0.5 L of M9 minimal media. Electrospray ionization mass spectrometry data confirm the correctness of the primary sequence. Dynamic light scattering experiment proves that the protein exists as a monomeric form. In addition, the circular dichroism results show that the protein has a well-regulated secondary structure and a high alpha-helical content in ammonium bicarbonate buffer at 20 degrees C and pH 7.4. Finally, uniformly 15N-labeled protein is characterized by a TROSY-HSQC spectrum, and the dispersion of 15N-1H cross-peaks in the spectrum indicates the presence of well-ordered and properly folded protein as a monomer.     

Mutations of the GATA4 and NKX2.5 genes in Chinese pediatric patients with non-familial congenital heart disease

A number of mutations in GATA4 and NKX2.5 have been identified to be causative for a subset of familial congenital heart defects (CHDs) and a small number of sporadic CHDs. In this study, we evaluated common GATA4 and NKX2.5 mutations in 135 Chinese pediatric patients with non-familial congenital heart defects. Two novel mutations in the coding region of GATA4 were identified, namely, 487C >T (Pro163Ser) in exon 1 in a child with tetralogy of Fallot and 1220C >A (Pro407Gln) in exon 6 in a pediatric patient with outlet membranous ventricular septal defect. We also found 848C >A (Pro283Gln) in exon 2 of the NKX2.5 gene in a pediatric patient with ventricular septal defect, patent ductus arteriosus and aortic isthmus stenosis. None of the mutations was detected in healthy control subjects (n = 114). This study suggests that GATA4 and NKX2.5 missense mutations may be associated with congenital heart defects in pediatric Chinese patients. Further clinical studies with large samples are warranted.     

基于多种遥感植被指数、叶绿素荧光与CO2通量数据的温带针阔混交林物候特征对比分析

植被物候学作为研究植被与环境条件相互作用的科学,在全球气候变化的大背景下已成为国际热点研究领域,其中森林植被在调节全球碳平衡、维护全球气候稳定的过程中有着至关重要的作用。随着遥感技术的发展,多种遥感指数被应用到森林植被物候研究中,其中以MODIS NDVI和EVI应用最为广泛,而叶绿素荧光(SIF)作为植被光合作用的"探针"也被广泛应用于森林植被物候研究中。为了探究3种指数在森林植被物候研究中的差异与特性,本文以长白山温带红松阔叶林通量观测站为研究区域,采用模型拟合结合动态阈值法提取2007—2013森林物候特征参数,并使用通量数据(总初级生产力GPP)进行验证。结果表明:NDVI与EVI、SIF相比,表现为生长季开始时间与结束时间的明显提前和滞后,与GPP数据偏差较大,且夏季生长季峰期曲线形态过宽且平坦,无法较好反映生长季变化特征;EVI相较于NDVI有所改善,整体变化趋势与SIF、GPP基本吻合,但依然存在秋季衰减时间稍迟于SIF与GPP的问题;SIF虽然存在夏季骤降现象,但依然与GPP数据一致性最好,可以较好反映出森林植被季节变化特征。SIF数据与植被光合作用的紧密关联使其在植被物候研究中具有优于植被指数的准确性,并随着遥感平台的增加和反演方法的改善,将会在多尺度、多类型的植被物候监测中发挥更加重要的作用。     

A urinary proteomic landscape of COVID-19 progression identifies signaling pathways and therapeutic options

Signaling pathway alterations in COVID-19 of living humans as well as therapeutic targets of the host proteins are not clear. We analyzed 317 urine proteomes, including 86 COVID-19, 55 pneumonia and 176 healthy controls, and identified specific RNA virus detector protein DDX58/RIG-I only in COVID-19 samples. Comparison of the COVID-19 urinary proteomes with controls revealed major pathway alterations in immunity, metabolism and protein localization. Biomarkers that may stratify severe symptoms f...     

Effects of heat shock on ovary development and hsp83 expression in Tribolium castaneum (Coleoptera: Tenebrionidae)

Heat shock affects reproductive performance in insects including Tribolium castaneum. In this study, the effects of heat shock on ovary development and hsp83 expression in T. castaneum were investigated. Two lines of T. castaneum, H line and C line, from the same base population were established and maintained for five successive generations. In each generation, the newly hatched beetles (within 3 h after eclosion) in the H line were treated with a heat shock at 40°C for 1 h, and those in the C line were raised at normal temperature (30°C) as control treatment. Four traits related to ovary development were measured for the beetles of the fifth generation: days from eclosion to laying the first eggs (T_o), days from eclosion to laying the first hatchable eggs (T_h), ovariole size on the third day after eclosion, and pupal mass of their offspring. The results showed that the beetles of the H line had a significantly longer pre‐oviposition period (0.6 more days) and smaller ovariole size than those of the C line. No significant difference in pupal mass was observed. Applying heat shock to the offspring of the fifth generation of both lines led to significantly higher hsp83 expression in offspring of the C line than in offspring of the H line. Within each line, the hsp83 expression level in offspring with heat shock was significantly higher than that of offspring without heat shock, but the difference in the C line was much larger than that in the H line. We infer from these results that a tradeoff between heat resistance, registered as hsp83 expression, and ovarian development operates under heat stress in T. castaneum. 2009 Wiley Periodicals, Inc.     

梅花新品种‘治章骨红重翠’跨品种群特性机制探究

‘治章骨红重翠’梅是一个具有跨品种群特性的梅花新品种,它同时具有朱砂和绿萼品种群的典型特征,其萼绿、花白、木质部淡暗紫色,但其机制并不清楚。本研究对‘治章骨红重翠’梅、‘豫西朱砂’梅、‘豫西变绿萼’梅表型、花色苷含量和花青素合成通路相关基因的表达量进行测定,结果表明,花瓣、萼片和枝内新生木质部的红色程度与总花色苷含量呈正相关。MYBɑ1、MYB1、bHLH3是影响这3个品种花部与木质部呈现红色的关键转录因子基因,转录因子促进结构基因F3′H、DFR、ANS和UFGT高表达,从而促进红色性状的产生。综合分析后推测,‘治章骨红重翠’梅花瓣白色源于矢车菊合成通路上其他分支FLS、F3′5′H、LAR和ANR基因高表达,谷胱甘肽转移酶(glutathione transferase, GST)基因GST低表达;萼片绿色源于F3′H、DFR和ANS基因低表达;木质部红色源于ANS、UFGT基因高表达。本研究对‘治章骨红重翠’梅跨品种群特性作出初步解释,为梅花花色与木质部颜色的分子育种提供了参考。     

日光诱导叶绿素荧光对亚热带常绿针叶林物候的追踪

植被物候期(春季返青和秋季衰老)是表征生物响应和陆地碳循环的基础信息。由于常绿针叶林冠层绿度的季节变动较弱,遥感提取常绿针叶林的物候信息存在着较大的不确定性,是目前区域物候监测中的难点。利用MODIS植被指数(归一化植被指数NDVI和增强型植被指数EVI)、GOME-2日光诱导叶绿素荧光(SIF)和通量数据(总初级生产力GPP)估算2007—2011年亚热带常绿针叶林物候期,用来比较三类遥感指数估算常绿针叶林物候的差异。结果表明:基于表征光合作用物候的通量GPP数据估算得到5年内亚热带常绿针叶林生长季开始时间(SOS_GPP)为第63天,生长季结束时间(EOS_GPP)为第324天,生长季长度为272天;基于反映植被光合作用特征的SIF曲线获得物候信息要滞后GPP物候期,其中生长季开始时间滞后19天,生长季结束时间滞后2天;基于传统植被指数NDVI和EVI的物候期滞后GPP物候期的时间要大于SIF滞后期,其中植被指数SOS滞后SOS_GPP31天,植被指数EOS滞后EOS_GPP10—17天。虽然基于3种遥...     

How ticks keep ticking in the adversity of host immune reactions

Journal of Mathematical Biology - Ixodid ticks are acknowledged as one of the most important hematophagous arthropods because of their ability in transmitting a variety of tick-borne diseases....