我国特有植物青檀遗传结构的ISSR分析

青檀是我国特有的第三纪残遗植物,是宣纸纤维来源的重要原材料,现已被列入国家Ⅲ级保护植物。采用简单序列重复区间扩增多态性(ISSR)标记技术,对采自27个地理种群的628个青檀个体的遗传多样性和遗传结构进行了检测。8对引物共得到66个清晰的扩增位点,其中多态性位点63个,多态性位点百分率为95.45%。分析结果表明,青檀在物种水平上具有很高的遗传多样性(PPB=95.45%、Ao=1.9545、Ae=1.5729、He=0.3335、I=0.4980、Hb=0.3437)。在种群水平上的遗传多样性(PPB=69.98%、Ao=1.6998、Ae=1.4449、He=0.2561、I=0.3793、Hb=0.2656)和种群间遗传分化水平(Gst=0.23,Ф_ST=0.25)均处于中等水平。华北地区(30°-42°N)和华南地区(22°-30° N)青檀的遗传多样性和遗传结构的差异并不显著。古老的起源历史、较广的分布范围、异交的繁育系统、风媒种子、长命的生活史以及华南和华北地形和植被的差异可能是导致青檀目前遗传格局的主要原因。结合叶绿体序列(cpDNA)序列的遗传结构特征对青檀的保护策略进行了探讨。     

大熊猫（Ailuropoda melanoleuca）生境选择研究进展

在回顾大熊猫生境选择研究历史的基础上,总结了大熊猫生境选择的考察因子、研究方法,概括了大熊猫对对觅食条件、隐蔽条件和气候条件的选择机制,并探讨了大熊猫生境选择的灵活性及大熊猫和与其同域分布的动物种的共存机制。作者认为,野外调查误差大、研究尺度单一等是目前大熊猫生境选择研究中存在的主要问题,应用目前较流行的已被证明比较优良的资源选择函数法、DNA指纹技术、无线电遥测、红外线自动感应照相系统、GIS与遥感成像等先进技术,并融合景观生态学理论,从较大尺度空间来研究大熊猫的生境选择,应是今后的发展方向。     

Multi-environment mapping and meta-analysis of 100-seed weight in soybean

100-Seed weight (100-SW) of soybean is an important but complicated quantitative trait to yield. This study was focus on the quantitative trait loci (QTLs) of soybean 100-SW from 2006 to 2010, using recombination inbred lines population that was derived from a cross between Charleston and Dongnong 594. A total of 23 QTLs for 100-SW were detected in the linkage group C2, D1a, F, G and O. Nine QTLs were identified by composite interval mapping including one QTL with the minimum confidence interval (CI) of 1.3?cM, while 14 QTLs by multiple interval mapping. Furthermore, 94 reported QTLs of 100-SW were integrated with our QTL mapping results using BioMercator. As a result, 15 consensus QTLs and their corresponding markers were identified. The minimum CI was reduced to 1.52?cM by the combination of meta-analysis. These findings may merit fine-mapping of these QTL in soybean.     

球毛壳菌(Chaetomium globosum)NK102 纤维素酶基因及其表达条件

[目的]生物质的利用是当前生物技术研究的一个热点.本小组分离到一株高效降解纤维素球毛壳菌(Chaetomium globosum)NK102,本文拟探索研究此菌的纤维素酶表达系统并寻找影响酶基因表达的关键因素.[方法]通过对NK102测序,本文界定了球毛壳菌NK102的主要纤维素酶编码基因,使用数字基因表达谱升级版(RNA-Seq)的方法得到纤维素酶基因的表达差异,然后观察了营养、物理条件下纤维素酶基因表达和酶活性变化的情况.[结果]发现随着培养时间的延长,纤维素酶基因整体上表达量升高.在所选基因中,外切葡聚糖酶、纤维二糖脱氢酶和内切葡聚糖酶基因(cbh1,cdh和egl1)的表达量最高.糖代谢的负调控因子ACE I和CreA的随时间表达量均降低,而Hap2/3/5复合体的表达量反而升高.之后检测了不同碳源培养基对纤维素酶基因表达量和酶活性的影响,发现葡萄糖为强阻遏因子,纤维二糖为其诱导物,而山梨醇没有影响.特别是,我们发现光照也影响纤维素酶基因的表达,黑暗条件明显抑制酶基因的表达.[结论]转录组学的方法可以初步探索纤维素酶表达的规律,酶基因的表达受到营养、物理条件的影响.本研究为揭示球毛壳菌降解纤维素分子机理和阐释生物质糖代谢途径提供了有用参考.     

杨树人工林生态系统通量贡献区分析

采取通量源区模型FSAM(Flux Source Area Model)利用2009年北京大兴区杨树人工林生态系统碳水通量涡度相关观测资料,分析了不同大气条件下生态系统的通量贡献区分布特征。研究结果表明:(1)该站通量贡献区随大气稳定条件增强而增大。除326.25°—3.75°方向生长季不稳定条件下外,生长季的通量贡献区范围普遍大于非生长季的贡献区范围;(2)通量贡献区与观测高度、冠层高度、地表粗糙度、风向以及大气稳定度有关,当风速风频较大,大气不稳定时,湍流扩散作用强烈,贡献区范围较小;(3)该观测场在2009年以不稳定大气条件为主,通量信息主要来源于距离观测塔50—400 m范围,且69.3%的信息来源于通量塔偏北风与偏南风方向,其中42.56%的信息来自于偏南风方向;(4)随着大气稳定程度加强,通量来源最少区从塔偏西方转为偏东方,在大气稳定度条件和风向的共同作用下,生长季时主要通量贡献区在塔偏南方向,而非生长季时主要通量贡献区在塔偏北方向。     

Differences in genotypes of Helicobacter pylori from different human populations

DNA motifs at several informative loci in more than 500 strains of Helicobacter pylori from five continents were studied by PCR and sequencing to gain insights into the evolution of this gastric pathogen. Five types of deletion, insertion, and substitution motifs were found at the right end of the H. pylori cag pathogenicity island. Of the three most common motifs, type I predominated in Spaniards, native Peruvians, and Guatemalan Ladinos (mixed Amerindian-European ancestry) and also in native Africans and U.S. residents; type II predominated among Japanese and Chinese; and type III predominated in Indians from Calcutta. Sequences in the cagA gene and in vacAm1 type alleles of the vacuolating cytotoxin gene (vacA) of strains from native Peruvians were also more like those from Spaniards than those from Asians. These indications of relatedness of Latin American and Spanish strains, despite the closer genetic relatedness of Amerindian and Asian people themselves, lead us to suggest that H. pylori may have been brought to the New World by European conquerors and colonists about 500 years ago. This thinking, in turn, suggests that H. pylori infection might have become widespread in people quite recently in human evolution.     

Human liver alkaline phosphatase, purification and partial sequencing: homology with the placental isozyme

Human liver alkaline phosphatase (AP) has been purified to homogeneity. The enzyme has a molecular weight of 150,000 in its native state and consists of two identical subunits of Mr 75,000. After treatment with endoglycosidase F the molecular weight is reduced to 50,000 indicating a high degree of glycosylation. The amino-terminal sequence up to 22 residues was found to be Leu-Val-Pro-Glu-Lys-Glu-Lys-Asp-Pro-Lys-Tyr-(Ala)-Arg-Asp-Gln-Ala-Gln-?- Thr-Leu-Lys-Tyr. The amino-terminal portions of human and bovine liver AP are identical. The amino termini of the human liver and human placental AP isozymes have appreciable homology. Conformationally the amino termini are very similar.     

Distal NF-kB binding motif functions as an enhancer for nontypeable H. influenzae-induced DEFB4 regulation in epithelial cells

Among the antimicrobial molecules produced by epithelial cells, DEFB4 is inducible in response to proinflammatory signals such as cytokines and bacterial molecules. Nontypeable Haemophilus influenzae (NTHi) is an important human pathogen that exacerbates chronic obstructive pulmonary disease in adult and causes otitis media and sinusitis in children. Previously, we have demonstrated that DEFB4 effectively kills NTHi and is induced by NTHi via TLR2 signaling. The 5′-flanking region of DEFB4 contains several NF-κB binding motifs, but their NTHi-specific activity remains unclear. In this study, we aimed to elucidate molecular mechanism involved in DEFB4 regulation, focusing on the role of the distal NF-κB binding motif of DEFB4 responding to NTHi. Here, we show that the human middle ear epithelial cells up-regulate DEFB4 expression in response to NTHi via NF-κB activation mediated by IκKα/β−IκBα signaling. Deletion of the distal NF-κB binding motif led to a significant reduction in NTHi-induced DEFB4 up-regulation. A heterologous construct containing the distal NF-κB binding motif was found to increase the promoter activity in response to NTHi, indicating a NTHi-responding enhancer activity of the distal NF-κB binding motif. Furthermore, electrophoretic mobility shift assays and chromatin immunoprecipitation assays showed that the p65 domain of NF-κB binds to the distal NF-κB binding motif in response to NTHi. Taken together, our results suggest that NTHi-induced binding of p65 NF-κB to the distal NF-κB binding motif of DEFB4 enhances NTHi-induced DEFB4 regulation in epithelial cells.     

Expression and bioactivity analysis of Staphylococcal enterotoxin M and N

Staphylococcal enterotoxins (SEs) are powerful superantigens that stimulate non-specific T-cell proliferation produced by Staphylococcus aureus and draw considerable attention as ideal drugs for cancer therapy. The filtrate of S. aureus culture has been used as ampul named Staphylococcal enterotoxin C injection in clinic for 10 years in China and proved to be effective. The superantigen SEC claimed to be the only active component without certifiable evidences. For further investigations of the active components of this injection and establishment of foundations for the development of novel anti-cancer drugs, in this research we extracted total DNA from S. aureus (FRI 1230), cloned, expressed and purified recombinant proteins of Staphylococcal enterotoxin M and N (rSEM and rSEN). The MTT assay of the purified rSEM and rSEN demonstrated that their abilities of stimulating T cells and inhibiting the proliferation of K562-ADM cells and B16 cells were equivalent to that of purified SEC2 in vitro. These findings suggested that SEC was not the only active component of Staphylococcal enterotoxin C injection and the effective procedure of expression and purification may be useful for mass productions of these therapeutically important proteins.