Spatial distribution as a measure of conservation needs: an example with Asiatic black bears in south-western China

Aim To create a fine‐scale map of the distribution of Asiatic black bears, identify landscape variables affecting the spatial range of this species and assess population trends using presence–absence data and opinions of local villagers. Location Sichuan Province, south‐western China. Methods We divided the province into 15 × 15 km cells, stratified them by forest cover, elevation and road density and randomly selected 494 cells (21% of province) for surveys. In each cell, we interviewed villagers and ground‐verified their reports of bear presence. We ground‐truthed reports of bear absence by conducting transects for bear sign in the best available habitat. We used logistic regression to identify key variables affecting presence of bears and predict their occurrence in unsampled cells. Results We detected bears in 360 cells (73%). Models correctly predicted bear occurrence in 90.3% of cells where we detected bears and 84.5% of sampled cells where bears were absent. Models predicted 42.7% of Sichuan to be occupied by bears. Bear occurrence was strongly related to forest cover throughout the province. Roads had a negative effect in western region of province. Agricultural lands had a negative effect only when they were distant from forests. Villagers were accurate in their knowledge of bear presence or absence. Interviewed villagers (n = 1816) thought that bears were increasing in 32%, stable in 10%, and decreasing in 58% of cells with bears. Where bear populations were perceived to be declining, villagers identified poaching as the most common cause. Main conclusions Our fine‐scale distribution map can be used for future monitoring and the key landscape factors related to occupancy by bears can be used in management plans for this species. Interviewing local villagers is an efficient and reliable means of assessing distribution, and changes therein, for animals such as bears that often interact with people and leave obvious signs.     

Auditory Attention Activates Peripheral Visual Cortex

Background

Recent neuroimaging studies have revealed that putatively unimodal regions of visual cortex can be activated during auditory tasks in sighted as well as in blind subjects. However, the task determinants and functional significance of auditory occipital activations (AOAs) remains unclear.

Methodology/Principal Findings

We examined AOAs in an intermodal selective attention task to distinguish whether they were stimulus-bound or recruited by higher-level cognitive operations associated with auditory attention. Cortical surface mapping showed that auditory occipital activations were localized to retinotopic visual cortex subserving the far peripheral visual field. AOAs depended strictly on the sustained engagement of auditory attention and were enhanced in more difficult listening conditions. In contrast, unattended sounds produced no AOAs regardless of their intensity, spatial location, or frequency.

Conclusions/Significance

Auditory attention, but not passive exposure to sounds, routinely activated peripheral regions of visual cortex when subjects attended to sound sources outside the visual field. Functional connections between auditory cortex and visual cortex subserving the peripheral visual field appear to underlie the generation of AOAs, which may reflect the priming of visual regions to process soon-to-appear objects associated with unseen sound sources.     

LKB1 tumor suppressor protein regulates actin filament assembly through Rho and its exchange factor Dbl independently of kinase activity

Background  

Germline mutations in LKB1 result in Peutz-Jeghers Syndrome characterized by intestinal hamartomas and increased incidence of epithelial cancers. LKB1 encodes a serine/threonine kinase that plays an important role in regulating energy metabolism through the AMPK/mTOR signaling pathway. In addition, LKB1 is homologous to PAR-4, a polarity protein first described in C. elegans, while activation of LKB1 in mammalian epithelial cells induces the polarized assembly of actin filaments.     

NDR1 protein kinase promotes IL‐17‐ and TNF‐α‐mediated inflammation by competitively binding TRAF3

Interleukin 17 (IL‐17) is an important inducer of tissue inflammation and is involved in numerous autoimmune diseases. However, how its signal transduction is regulated is not well understood. Here, we report that nuclear Dbf2‐related kinase 1 (NDR1) functions as a positive regulator of IL‐17 signal transduction and IL‐17‐induced inflammation. NDR1 deficiency or knockdown inhibits the IL‐17‐induced phosphorylation of p38, ERK1/2, and p65 and the expression of chemokines and cytokines, whereas the overexpression of NDR1 promotes IL‐17‐induced signaling independent of its kinase activity. Mechanistically, NDR1 interacts with TRAF3 and prevents its binding to IL‐17R, which promotes the formation of an IL‐17R‐Act1‐TRAF6 complex and downstream signaling. Consistent with this, IL‐17‐induced inflammation is significantly reduced in NDR1‐deficient mice, and NDR1 deficiency significantly protects mice from MOG‐induced experimental autoimmune encephalomyelitis (EAE) and 2,4,6‐trinitrobenzenesulfonic acid (TNBS)‐induced colitis likely by its inhibition of IL‐17‐mediated signaling pathway. NDR1 expression is increased in the colons of ulcerative colitis (UC) patients. Taken together, these findings suggest that NDR1 is involved in the development of autoimmune diseases.     

Association of TNP2 Gene Polymorphisms of the bta-miR-154 Target Site with the Semen Quality Traits of Chinese Holstein Bulls

Transition protein 2 (TNP2) participates in removing nucleohistones and the initial condensation of spermatid nucleus during spermiogenesis. This study investigated the relationship between the variants of the bovine TNP2 gene and the semen quality traits of Chinese Holstein bulls. We detected three single nucleotide polymorphisms (SNPs) of the TNP2 gene in 392 Chinese Holstein bulls, namely, g.269 G>A (exon 1), g.480 C>T (intron 1), and g.1536 C>T (3′-UTR). Association analysis showed that the semen quality traits of the Chinese Holstein bulls was significantly affected by the three SNPs. The bulls with the haplotypic combinations H6H4, H6H6, and H6H8 had higher initial semen motility than those with the H7H8 and H8H4 haplotypic combinations (P<0.05). SNPs in the microRNA (miRNA) binding region of the TNP2 gene 3′-UTR may have contributed to the phenotypic differences. The phenotypic differences are caused by the altered expression of the miRNAs and their targets. Bioinformatics analysis predicted that the g.1536 C>T site in the TNP2 3′-UTR is located in the bta-miR-154 binding region. The quantitative real-time polymerase chain reaction results showed that the TNP2 mRNA relative expression in bulls with the CT and CC genotypes was significantly higher than those with the TT genotype (P<0.05) in the g.1536 C>T site. The luciferase assay also indicated that bta-miR-154 directly targets TNP2 in a murine Leydig cell tumor cell line. The SNP g.1536 C>T in the TNP2 3′-UTR, which altered the binding of TNP2 with bta-miR-154, was found to be associated with the semen quality traits of Chinese Holstein bulls.     

Discrepant Expression of Cytokines in Inflammation- and Age-Related Cataract Patients

Purpose

Inflammatory cataracts secondary to Behcet''s disease (BD) or Vogt-Koyanagi-Harada disease (VKH) are thought to result from a pathological dysregulation of cytokines that is different from that of age-related (AR) cataracts. However, little is known about the function of cytokines in the development of inflammatory cataracts. The purpose of this study was to identify possible differences in cytokine expression in inflammation- and age-related cataract patients.

Methods

Analysis techniques involving the concomitant use of a cocktail of antibody-coated non-magnetic beads were used to determine the cytokine expression profiles of BD, VKH and AR cataract patients. Furthermore, anterior chamber aqueous flares and inflammatory cells were quantitatively measured with a laser flare cell meter (LFCM).

Results

The expressions of interleukin-2 (IL-2), IL-4, IL-6, IL-10, IL-17A, and interferon-γ (IFN-γ) were analyzed in aqueous humor (AqH), phytohemagglutinin (PHA)-stimulated and non-PHA-stimulated cultures of peripheral blood mononuclear cells (PBMCs) from the three types of cataract patients. IL-6 and IFN-γ were identified above the detection limits, but, among the BD and VKH cataract patients, only the levels of IL-6 were significantly higher in both the AqH and PBMC non-PHA cultures compared with the levels observed in the AR cataract patients. In contrast, IFN-γ was significantly elevated in the AqH of the BD cataract patients compared with the VKH and AR cataract patients. In the PHA-stimulated PBMC cultures, IL-2, IFN-γ, IL-6, and IL-17A were significantly increased, and the IL-6 level was significantly higher in the VKH patients than in the BD and AR cataract patients. The correlation analyses of the cytokines and inflammation indexes of the AqH obtained with the LFCM revealed that only IL-6 was significantly correlated with the inflammation index.

Conclusion

Distinct expression profiles of cytokines and the correlations of these profiles with in vivo inflammatory indexes for inflammatory and AR cataract patients were identified.     

豫东平原聚落景观格局变化

中国的快速城镇化必然导致聚落景观格局的变化,但目前相关研究对平原地区关注相对较少。文中选取豫东平原地区的开封、商丘、周口市,运用GIS空间分析方法和ENVI遥感影像处理技术,对该地区1972、2015年市域中观尺度上的聚落规模、聚落景观空间变化特征进行分析。结果显示:(1)在聚落发展过程中,1972—2015年聚落斑块数量有所减少,聚落规模逐渐扩张,市域内最大聚落斑块扩张相对更为明显;对聚落斑块扩张强度的分析发现,城市市辖区及周边乡镇聚落扩张强度相对较高。(2)地区内聚落斑块空间分布表现出聚集分布特征,但该时期聚集程度有所减弱;两个年份聚落核密度分布格局大致相似,局部地区存在多核扩散现象,市域尺度上的核密度分布存在地区差异。(3)对斑块形状指数的分析发现,研究区狭长或曲折聚落斑块在空间上分散布局,整体上区域内聚落形状趋于规则。(4)随着距河流、道路距离的增加,聚落斑块总面积和数量有所减少,且道路对聚落分布仅在一定范围内存在较大影响,距中心城市0—6km范围内聚落受中心城区发展辐射影响较大。本文的分析可为平原地区聚落景观的优化布局和聚落用地的集约化发展提供一定的参考。