云锦杜鹃苯丙氨酸解氨酶基因的克隆及功能分析

苯丙氨酸解氨酶(phenylalaninammo-nialyase,PAL)是植物香气化合物中苯甲酸甲酯合成途径的关键酶.为探究云锦杜鹃Rhododendron fortunei RhPAL基因的功能,利用RT-PCR和cDNA末端快速扩增技术(rapid amplification of cDNA ends,RACE...     

Rational redesign of the 4-chlorobenzoate binding site of 4-chlorobenzoate: coenzyme a ligase for expanded substrate range

Environmental aromatic acids are transformed to chemical energy in bacteria that possess the requisite secondary pathways. Some of these pathways rely on the activation of the aromatic acid by coenzyme A (CoA) thioesterification catalyzed by an aromatic acid: CoA ligase. Adaptation of such pathways to the bioremediation of man-made pollutants such as polychlorinated biphenyl (PCB) and dichlorodiphenyltrichloroethane (DDT) requires that the chlorinated benzoic acid byproduct that is formed be able to be eliminated by further degradation. To take advantage of natural benzoic acid degrading pathways requiring initial ring activation by thioesterification, the pathway aromatic acid:CoA ligase must be an effective catalyst with the chlorinated benzoic acid. This study, which focuses on the 4-chlorobenzoate:CoA ligase (CBL) of the 4-monochlorobiphenyl degrading bacterium Alcaligenes sp. strain ALP83, was carried out to determine if the 4-chlorobenzoate binding site of this enzyme can be transformed by rational design to recognize the chlorobenzoic acids formed in the course of breakdown of other environmental PCB congeners. The fundamental question addressed in this study is whether it is possible to add or subtract space from the substrate-binding pocket of this ligase (to complement the topology of the unnatural aromatic substrate) without causing disruption of the ligase catalytic machinery. Herein, we report the results of a substrate specificity analysis that, when interpreted within the context of the X-ray crystal structures, set the stage for the rational design of the ligase for thioesterification of two PCB-derived chlorobenzoic acids. The ligase was first optimized to catalyze CoA thioesterification of 3,4-dichlorobenzoic acid, a poor substrate, by truncating Ile303, a large hydrophobic residue that packs against the ring meta-C(H) group. The structural basis for the approximately 100-fold enhancement in the rate of 3,4-dichlorobenzoate thioesterification catalyzed by the I303A and I303G CBL mutants was validated by determination of the crystal structure of the 3,4-dichlorobenzoate-bound enzymes. Determinations of the structures of I303 mutant complexes of 3-chlorobenzoate, a very poor substrate, revealed nonproductive binding as a result of the inability of the substrate ring C(4)H group to fill the pocket that binds the C(4)Cl group of the native substrate. The C(4)Cl pocket of the CBL I303A mutant was then reduced in size by strategic amino acid replacement. A 54-fold improvement in catalytic efficiency was observed for the CBL F184W/I303A/V209T triple mutant. The results of this investigation are interpreted as evidence that the plasticity of the ligase catalytic scaffold is sufficient to allow expansion of substrate range by rational design. The combination of structural and kinetic analyses of the constructed mutants proved to be an effective approach to engineering the ligase for novel substrates.     

Antidiabetic potential of oleanolic acid from Ligustrum lucidum Ait

Ligustrum lucidum Ait. has been used in traditional Chinese medicine for over 1000 years because of its anti-tumor, antimutagenic, antidiabetic, and hepatoprotective properties. The aim of this study was to determine whether oleanolic acid (OA) is the principal active compound of L. lucidum responsible for its antidiabetic properties, and to examine its effect on the expression of thyroid hormones and insulin secretion, thus revealing the mechanism by which L. lucidum modulates insulin levels in diabetes. When rats with streptozotocin-induced diabetes were treated with OA (100 and 200 mg/kg body mass per day, for 40 days), the changes in blood glucose levels and in oral glucose tolerance tests showed that hypoglycemia was more pronounced in OA-treated groups than in the diabetic control rats, and that the levels of triglyceride, total cholesterol, and low-density lipoportein cholesterol in OA-treated rats were lower than those in the diabetic control rats, whose high-density lipoprotein cholesterol increased. OA-treated rats also gained weight, and exhibited increased serum insulin levels. In contrast, OA treatment did not effect the levels of thyroid hormone or TSH in rats with streptozotocin-induced diabetes. These results indicate that OA has hypoglycemic and hypolipidemic effects. OA treatment might stimulate insulin release, and consequently, results in the modulation of glucose levels and regulation of lipid metabolism.     

Metabolome profiling reveals metabolic cooperation between Bacillus megaterium and Ketogulonicigenium vulgare during induced swarm motility

The metabolic cooperation in the ecosystem of Bacillus megaterium and Ketogulonicigenium vulgare was investigated by cultivating them spatially on a soft agar plate. We found that B. megaterium swarmed in a direction along the trace of K. vulgare on the agar plate. Metabolomics based on gas chromatography coupled with time-of-flight mass spectrometry (GC-TOF-MS) was employed to analyze the interaction mechanism between the two microorganisms. We found that the microorganisms interact by exchanging a number of metabolites. Both intracellular metabolism and cell-cell communication via metabolic cooperation were essential in determining the population dynamics of the ecosystem. The contents of amino acids and other nutritional compounds in K. vulgare were rather low in comparison to those in B. megaterium, but the levels of these compounds in the medium surrounding K. vulgare were fairly high, even higher than in fresh medium. Erythrose, erythritol, guanine, and inositol accumulated around B. megaterium were consumed by K. vulgare upon its migration. The oxidization products of K. vulgare, including 2-keto-gulonic acids (2KGA), were sharply increased. Upon coculturing of B. megaterium and K. vulgare, 2,6-dipicolinic acid (the biomarker of sporulation of B. megaterium), was remarkably increased compared with those in the monocultures. Therefore, the interactions between B. megaterium and K. vulgare were a synergistic combination of mutualism and antagonism. This paper is the first to systematically identify a symbiotic interaction mechanism via metabolites in the ecosystem established by two isolated colonies of B. megaterium and K. vulgare.     

EVALUATING THE IMPACT OF INSECT COMMUNITY ON PINE CATERPILLAR DENSITY IN DIFFERENT STAND CONDITIONS

Abstract  Natural enemies play an important role in inhibiting population growth of pine caterpillar, but they are difficult to be used in systematic management models. This paper attempts to use some forest stand factors to substitute the effect of natural enemies, which could be used in management models. Through the studies from more than 200 stand plots with different stand conditions in Qu County, Changshan County, and Longyou County of Zhejiang Province, 16 predominant species groups from insect community were selected, and the canonical correlation coefficient between the diversity index, species number, individual number of predominant species and the stand factors was analyzed. The results indicated that the canopy density and ground vegetation were the key stand factors for characterizing the function of insect community. The forest area was divided into four types according to the variation of canopy and vegetation conditions by using cluster analysis. The regression models between the rate of variation of pine caterpillar density and the forest factors including canopy density and vegetation covers were developed in each type of forests. There were significant differences in diversity index, species number, individual number of insect community and population density of pine caterpillar among four types of forests, and correlation coefficients of the four regression models were rather high ( r =0. 924 — 0. 964). This means that the classification of the forest stands is reasonable and the stand factors can characterize the effect of natural enemies in practice.     

乳链球菌SB900胞壁肽聚糖的部分生物学活性

对乳链球菌（Streptococcuslactis）SB900胞壁肽聚糖（简称为LABPG）进行了分离纯化及化学成分分析,并测定了其部分生物学活性．结果表明,LABPG蛋白质含量为9．84％,NAG0．871μmol／mg,NAM1．14μmol／mg;氨基酸分析结果表明,Ala、Glu、Asp含量较高,分别为1．046、0．775、0．304μmol／mg。以小鼠为实验材料进行动物学实验,对LABPG的生物学活性测定结果表明,LANPG无毒、安全可靠;腹腔注射LABPG后,PMΦ数目增多,吞噬功能明显增强,血清溶菌酶活性增强;YC-花环实验表明,腹腔注射LABPG的小鼠PMΦ表面C3b受体活性增强,YC-花环形成率较高,统计学分析有显著差别。说明LABPG对于MΦ有一定的激活作用,可作为机体的免疫激活剂。     

脱细胞小肠黏膜下层与脱细胞心包修复大鼠腹壁缺损的对比研究

目的：观察小肠黏膜下层（small intestinal submucosa,SIS）和脱细胞心包（pericardium,PC）修复大鼠腹壁缺损的效果,比较两种生物材料相容性。方法：SD大鼠40只,体重200～250g,手术造成3 cm×2 cm全层腹壁缺损,随机分为二组（n=20）,分别采用相同面积的小肠黏膜下层（small intestinal submucosa,SIS）和脱细胞真皮基质（acellular dermal matr,ADM）补片进行修补。术后1、2、4和8周分批取出腹壁修复材料,行动物一般情况观察、腹腔内粘连情况评价、力学强度测定及组织学观察。结果：术后动物都成活,两种材料术后8周均无疝瘘发生,缺损得到完整修复。术后各期SIS组的腹腔粘连评分明显低于PC组。术后4、8周,SIS组力学强度强于PC组,有统计学意义;组织学观察两组未见明显免疫排斥反应,SIS组的组织再生和重塑、血管化优于PC组;术后炎症反应两组无明显差异。结论：SIS和PC均能修复大鼠腹壁全层缺损,SIS在生物相容性方面优于PC。     

动物源细菌耐药性研究现状与对策

目前我国动物源细菌耐药现象十分普遍,多重耐药甚至泛耐药的菌株不断出现,给公共卫生和食品安全造成了重大威胁。文中从我国动物源耐药性研究的主要问题、细菌耐药性形成和传播机制以及耐药性防控策略等几个方面进行综述,以期为耐药性的研究和防控提供参考。     

分批发酵生产谷氨酰胺转氨酶的温度控制策略

微生物谷氨酰胺转氨酶 (Ｍｉｃｒｏｂｉａｌｔｒａｎｓｇｌｕｔａｍｉｎａｓｅ ,简称ＭＴＧ ,ＥＣ2 3 2 13)由于能催化许多食品中蛋白质的交联反应 ,改善各种蛋白质的功能性质 ,在食品工业具有广泛的应用潜力[1] ,因而引起了人们的极大兴趣。谷氨酰胺转氨酶的生产通常采用从豚鼠肝脏或组织中提取 ,由于豚鼠肝脏或组织来源稀少 ,谷氨酰胺转胺酶的分离纯化过程复杂 ,因而价格昂贵。 2 0世纪 80年代末 ,Ａｎｄｏ和Ｍｏｔｏｋｉ等人[2 ,3 ] 首先报道了利用微生物发酵法生产谷氨酰胺转胺酶的结果 ;近年来 ,Ｇｅｒｂｅｒ等人[4 ] 对其下游技术进…