有机酸在植物解铝毒中的作用及生理机制

酸性土壤上铝毒是限制作物产量的一个重要障碍因子,具有螯合能力的有机酸在植物铝的外部排斥机制和内部耐受机制均具有重要作用,在铝的外部排斥解毒过程中,植物通过根系分泌有机酸进入根际,如柠檬酸,草酸,苹果酸等与铝形成稳定的复合体,阻止铝进入共质体,从而达到植物体外解除铝毒害效应的目的,且分泌的有机酸对铝的胁迫诱导表现出高度的专一性,分泌的关键点位于根尖,不同的物种间分泌的有机酸种类,分泌的模式及生理机理存在差异,在铝积累型植物的内部解毒过程中,有机酸与铝形成稳定的化合物,降低植物体内铝离子的生理活性,从而降低细胞内铝离子的毒害效应,如绣球花中铝与柠檬酸形成1：1的复合体,荞麦内铝与草酸形成1：3的复合体,本文就有机酸在植物忍耐和积累铝中的作用及生理机制作一简要综述。     

Ephrin‐A3 reverse signaling regulates hippocampal neuronal damage and astrocytic glutamate transport after transient global ischemia

Increasing evidence indicates that the Eph receptors and their ephrin ligands are involved in the regulation of interactions between neurons and astrocytes. Moreover, astrocytic ephrin‐A3 reverse signaling mediated by EphA4 receptors is necessary for controlling the abundance of glial glutamate transporters. However, the role of ephrin‐A3 reverse signaling in astrocytic function and neuronal death under ischemic conditions remains unclear. In the present study, we found that the EphA4 receptor and its ephrin‐A3 ligand, which were distributed in neurons and astrocytes, respectively, in the hippocampus showed a coincident up‐regulation of protein expression in the early stage of ischemia. Application of clustered EphA4 decreased the expressions of astrocytic glutamate transporters together with astrocytic glutamate uptake capacity through activating ephrin‐A3 reverse signaling. In consequence, neuronal loss was aggravated in the CA1 region of the hippocampus accompanied by impaired hippocampus‐dependent spatial memory when clustered EphA4 treatment was administered prior to transient global ischemia. These findings indicate that EphA4‐mediated ephrin‐A3 reverse signaling is a crucial mechanism for astrocytes to control glial glutamate transporters and prevent glutamate excitotoxicity under pathological conditions.

     

Production of 3-hydroxypropionate homopolymer and poly(3-hydroxypropionate-co-4-hydroxybutyrate) copolymer by recombinant Escherichia coli

Conversion of 3-hydroxypropionate (3HP) from 1,3-propanediol (PDO) was improved by expressing dehydratase gene (dhaT) and aldehyde dehydrogenase gene (aldD) of Pseudomonas putida KT2442 under the promoter of phaCAB operon from Ralstonia eutropha H16. Expression of these genes in Aeromonas hydrophila 4AK4 produced up to 21 g/L 3HP in a fermentation process. To synthesize homopolymer poly(3-hydroxypropionate) (P3HP), and copolymer poly(3-hydroxypropionate-co-3-hydroxybutyrate) (P3HP4HB), dhaT and aldD were expressed in E. coli together with the phaC1 gene encoding polyhydroxyalkanoate (PHA) synthase gene of Ralstonia eutropha, and pcs' gene encoding the ACS domain of the tri-functional propionyl-CoA ligase (PCS) of Chloroflexus aurantiacus. Up to 92 wt% P3HP and 42 wt% P3HP4HB were produced by the recombinant Escherichia coli grown on PDO and a mixture of PDO+1,4-butanediol (BD), respectively.     

Biological control of oilseed rape Sclerotinia stem rot by Bacillus subtilis strain Em7

In the present study, the endophytic bacterium Bacillus subtilis strain Em7 (GU258545.1) was evaluated as a biological control agent for Sclerotinia sclerotiorum on oilseed rape. In petri dish, strain Em7 not only strongly inhibited pathogen mycelium growth but also germination of sclerotia at concentrations between 10⁹ and 10¹¹ colony forming unit (CFU)·ml^?1. Scanning electron microscopy and transmission electron microscopy studies revealed that in the presence of strain Em7, hyphae of S. sclerotiorum showed leakage and disintegration of hyphal cytoplasm. Furthermore, the strain Em7 showed a broad antifungal spectrum on mycelium growth of numerous important plant pathogenic fungi. Light microscopic observations revealed that strain Em7 caused morphological alterations including increased branching, swelling and collapse of cytoplasm. In the greenhouse, spray treatments of cell suspensions of strain Em7 (1×10⁹ CFU·ml^?1) reduced leaf and stem rot incidence and severity in the seedling and blossom stage. The control efficacy was higher when strain Em7 cell suspension was applied one day prior to inoculation of the pathogen than after inoculation. Three-year field trials showed that two applications of strain Em7 cell suspension at blossom stage significantly reduced disease incidence and severity by 50–70%. There was no significant difference in control efficacy among treatments with strain Em7 cell suspension and the fungicides containing carbendazim or tebuconazole (P = 0.05). Thus, our results strongly suggest that B. subtilis strain Em7 is a promising biological control agent for control of oilseed rape Sclerotinia stem rot.     

太湖大型底栖动物群落结构及多样性

为揭示现阶段太湖大型底栖动物群落现状及其对生态环境变化的响应, 于2007年2月至2008年11月对太湖大型底栖动物进行为期两周年的季度调查。30个采样点共记录底栖动物3门7纲19科40种, 底栖动物平均密度和生物量空间差异较大, 平均密度高值出现在梅梁湾、竺山湾及河口, 主要为寡毛纲颤蚓类; 平均生物量高值出现在贡湖湾、西湖区、东太湖和东部湖湾, 主要为软体动物。霍甫水丝蚓(Limnodrilus hoffmeisteri)、中华河蚓(Rhyacodrilus sinicus)、河蚬(Corbicula fluminea)、铜锈环棱螺(Bellamya aeruginosa)、中国长足摇蚊(Tanypus chinensis)和钩虾属一种(Gammarus sp.)是现阶段太湖大型底栖动物的优势种。聚类分析将30个采样点分成3组, 相似性分析检验表明各聚类组大型底栖动物群落具有显著差异(P<0.05)。多样性分析结果表明, 东太湖和东部湖湾物种多样性、丰富度和均匀度最高, 优势种为腹足纲螺类; 梅梁湾、竺山湾及河口多样性最低、密度最高, 霍甫水丝蚓和中华河蚓在该区占据绝对优势; 贡湖湾、湖心和西湖区多样性处于中等水平, 其优势种为河蚬。研究结果表明营养水平、底质类型以及水生植被的分布是决定太湖大型底栖动物群落结构及多样性的关键因子。     

PSMD: An extensive database for pan‐species microsatellite investigation and marker development

Microsatellites are widely distributed throughout nearly all genomes which have been extensively exploited as powerful genetic markers for diverse applications due to their high polymorphisms. Their length variations are involved in gene regulation and implicated in numerous genetic diseases even in cancers. Although much effort has been devoted in microsatellite database construction, the existing microsatellite databases still had some drawbacks, such as limited number of species, unfriendly export format, missing marker development, lack of compound microsatellites and absence of gene annotation, which seriously restricted researchers to perform downstream analysis. In order to overcome the above limitations, we developed PSMD (Pan‐Species Microsatellite Database, http://big.cdu.edu.cn/psmd/ ) as a web‐based database to facilitate researchers to easily identify microsatellites, exploit reliable molecular markers and compare microsatellite distribution pattern on genome‐wide scale. In current release, PSMD comprises 678,106,741 perfect microsatellites and 43,848,943 compound microsatellites from 18,408 organisms, which covered almost all species with available genomic data. In addition to interactive browse interface, PSMD also offers a flexible filter function for users to quickly gain desired microsatellites from large data sets. PSMD allows users to export GFF3 formatted file and CSV formatted statistical file for downstream analysis. We also implemented an online tool for analysing occurrence of microsatellites with user‐defined parameters. Furthermore, Primer3 was embedded to help users to design high‐quality primers with customizable settings. To our knowledge, PSMD is the most extensive resource which is likely to be adopted by scientists engaged in biological, medical, environmental and agricultural research.     

大连长山群岛海岸带沉积物微生物群落结构特征

【目的】为揭示海岸带微生物群落结构在人类活动影响下的分布差异及对环境因子变化的响应趋势,【方法】本实验采用t-RFLP和DGGE技术,对大连长山群岛不同功能类型海岸潮间带沉积物中的微生物群落结构特征进行比对和分析,并通过16S rRNA基因文库解析养殖污染站位的微生物群落结构特征。【结果】T-RFLP的t-RF分析显示,养殖污染严重站位的微生物丰度、香农指数和均匀度明显高于其它站位。通过对t-RFLP色谱峰和DGGE图谱聚类分析发现,处于旅游区的2个站位微生物群落结构相似度较高,养殖区随污染程度加重与旅游区的群落结构差异增大。对污染严重站位建立的克隆文库显示变形菌门(Proteobacteria)为优势菌群,其中γ-变形菌门是主要存在的亚门微生物。【结论】T-RFLP和DGGE技术从不同方面反映了环境中的微生物群落结构特征,研究结果表明养殖污染区的微生物群落结构发生明显变化,其影响大于地理隔离效应,污染严重区域的微生物群落中存在大量肠杆菌属,且多个物种与富营养化和赤潮相关联,如拟杆菌门和α-变形细菌红细菌目的细菌。     

大型绿藻浒苔转化表达系统选择标记的筛选

主要研究了条浒苔对抗生素氯霉素和除草剂Basta的敏感性,以确定适合的阳性选择标记基因。应用不同浓度氯霉素(0、25、50、75、100、125μg/ml)和Basta(0、5、12.5、25、37.5、50μg/ml)对不同发育时期条浒苔细胞存活率影响进行了测定。实验结果表明:不同发育时期条浒苔对氯霉素和Basta的敏感性不同。其中最大浓度125μg/ml浓度的氯霉素在15d内对条浒苔孢子和小苗两个不同发育时期的细胞均难以达到全部杀死效果,相对存活率仍分别为1%和20%;而Basta对条浒苔孢子和小苗均具有很强的杀生作用,其中5μg/ml浓度的Basta在3d内可将条浒苔孢子全部杀死,12.5μg/ml浓度下约一周时间可以将浒苔小苗全部致死。本实验结果提示bar基因有可能成为浒苔基因工程较理想的选择标记基因。     

我国微生物学科在国际学术中的地位及前景研究--基于“基本科学指标数据库”的分析

本研究基于基本科学指标（ESI ）数据库收录的微生物学领域2003～2013年度资料,利用文献计量学方法进行统计,获得该学科有显著意义和高被引的国家（地区）、机构及期刊分布,并分析该学科的高被引论文和热点论文。结果显示,我国在微生物领域的科研产出量已逐步提升到较高水平,但论文的国际影响力有待进一步提高。