一株产纤溶酶菌株的分离、鉴定及其酶活特征的初步研究

[目的]分离筛选并鉴定产纤溶酶的菌株.[方法]采用血粉培养基富集,琼脂糖-纤维蛋白平板筛选,从自然界中分离筛选出一株产纤溶活性物质的菌株.通过形态学特征、生理生化特征研究,并结合16S rRNA基因序列分析及分子系统发育树的构建结果,确定菌株的种类.[结果]从自然界分离筛到一株产纤溶酶的菌株EF608,经鉴定该菌株为粪肠球菌(Enterococcus faecalis). SDS-PAGE和纤维蛋白自显影表明该纤溶酶的分子量为37 kD,最适反应温度和pH分别为35℃和7.5,EDTA能完全抑制其纤溶活性,而PMSF对其活性无抑制作用.菌株EF608发酵液不仅可以直接水解纤维蛋白,而且具有体外溶栓的作用,对血红细胞没有溶解作用.[结论]筛选到一株具有纤溶活性的粪肠球菌——EF608,为获取新型纤溶酶提供了一种的新的菌源.     

荒漠破碎化生境中长爪沙鼠集合种群野外验证研究

近年来,人类活动和自然干扰,导致内蒙古阿拉善荒漠区生境的破碎化,出现了长爪沙鼠在不同斑块间的不连续分布,每一斑块内可能存在一个局域种群,而集合种群建立的前提条件,是局域种群斑块状分布在离散的栖息地环境中。2002~2012年每年的4~10月,在阿拉善荒漠区禁牧、轮牧、过牧和开垦4种人为不同利用方式形成的生境斑块中,采用标志重捕法对长爪沙鼠（Meriones unguiculatus）种群进行定点监测。通过分析长爪沙鼠种群动态,计算各局域种群的灭绝风险,利用Spearman秩相关系数检验种群动态的空间同步性,同时以种群周转率对长爪沙鼠扩散能力进行评估,以检验阿拉善荒漠区长爪沙鼠种群空间结构是否具有经典集合种群的功能。结果表明：（1） 不同生境斑块可被长爪沙鼠局域种群占据,11年间捕获长爪沙鼠2~7次不等;（2） 长爪沙鼠所有局域种群均具有灭绝风险,在轮牧区和禁牧区灭绝率高达1.000 0,开垦区灭绝率最低,也达到0.333 4,而本研究期间最大局域种群（2008年过牧区,26只/hm²）,在2010年发生了局域灭绝;（3） 不同生境斑块间没有明显的空间隔离而阻碍局域种群的重新建立,长爪沙鼠扩散能力较强,绝大部分月份的种群周转率在50.0%以上,特别是周转率达到100.0%的月份较多;（4） 不同生境斑块间仅轮牧区和禁牧区中长爪沙鼠种群密度显著正相关（P<0.05）,而其他生境斑块间相关性均不显著（P >0.05）,长爪沙鼠局域种群整体显示出明显的非同步空间动态。阿拉善荒漠区长爪沙鼠种群满足作为经典集合种群物种区域续存的4个条件,具有作为研究小哺乳动物集合种群的潜在价值。     

莫莫格自然保护区白鹤秋季迁徙停歇期觅食生境选择

2008年秋季(10月8日—20日)及2009年秋季(9月20日—10月16日),通过样方法对觅食生境11个生态因子进行调查,利用卡方检验、资源选择指数和资源选择函数在莫莫格保护区对秋季迁徙停歇期白鹤觅食生境选择进行研究。结果表明,白鹤对距人为干扰源距离、植被密度、盖度、高度、植物性食物密度以及水深均具有选择性,但对宏观尺度干扰因子的选择性较低。其偏好觅食生境的特点为:距一级路>5000m,>二级路1500m以上,>三级路1000m以上,>居民点1000m以上,农田>1000m;植被密度20~50株/m2,盖度<10%,高度<20cm,扁杆藨草密度1~50株/m2,藨草密度1~10株/m2,水深40~60cm。白鹤秋季觅食生境资源选择函数为Logistic(P)=0.663+0.565×与一级道路距离+0.042×与二级道路距离+0.519×与三级道路距离+0.353×与居民点距离+0.169×与农田距离–0.455×植被密度–0.618×植被盖度–0.548×植被高度–0.158×扁杆藨草密度–0.404×藨草密度+0.920×水深,T(x)=eLogistic(p)/[1+eLogistic(p)],模型正确预测率为82.9%。     

施氮量和种植密度对东北特早熟棉区棉铃生物量和氮素累积的影响

以辽棉19号和美棉33B为材料,研究了不同施氮量(0、240、480 kg ·hm-2)和不同种植密度(75000、97500、120000 plants·hm-2)对东北特早熟棉区棉花棉铃生物量和氮素累积特征的影响.结果表明： 棉花单铃、棉籽和纤维的生物量及其氮素累积随棉花生育进程的动态变化均符合“S”型曲线,种植密度和施氮量可以显著影响棉铃各部分生物量和氮素累积的动态特征,以及棉花产量与品质;在施氮量240 kg·hm-2和种植密度97500 plants·hm-2处理下,单铃、棉籽和纤维的生物量均达到最大,生物量和氮素累积的快速累积起始时间和终止时间较早但持续时间较短,生物量快速累积速率最大,生物量和氮素在铃壳中的分配系数最低,在棉籽和纤维中分配系数最高.     

G蛋白与整合素αⅡbβ3的双向信号转导

整合素是一类细胞表面受体家族分子,通过双向信号转导参与细胞与细胞外基质、细胞与细胞的粘附以及细胞的迁移.整合素αⅡbβ3(GPⅡb-Ⅲa)特异表达于巨核/血小板系,并且是其含量最多的膜糖蛋白,介导血小板的粘附、伸展、聚集等.G蛋白在整合素αⅡbβ3双向信号转导中发挥重要作用,其中较受关注的是:异源三聚体G蛋白和小G蛋白Rap1参与整合素αⅡbβ3的内向外信号转导;小G蛋白(Rho A、Rac等)和Gα13参与整合素αⅡbβ3的外向内信号转导.在蛋白质结构与功能关系的层面,本文总结了G蛋白的结构、分类、功能以及近年来G蛋白在整合素αⅡbβ3双向信号转导中作用的研究进展.     

The cardioprotective effect of fluvastatin on ischemic injury via down-regulation of toll-like receptor 4

To determine whether the cardioprotection effect of fluvastatin mediates by toll-like receptor 4 (TLR4) signaling pathway, fifty Sprague–Dawley rats were randomly divided into five groups: sham operation group, ischemia/reperfusion (I/R) group, fluvastatin groups (high-dosage, medium-dosage, low-dosage, n = 10 in each group). Except sham operation group, the rest four groups of rats were artificially afflicted with coronary occlusion for 30 min, then reperfusion 2 h. Light microscope and transmission electronic microscope were used to observe structural changes of myocardium. RT–PCR was used to measure TLR4 mRNA expression level, TLR4 protein expression was detected by immunohistochemistry. Western blot was used to measure myocardial NF-κB protein level; ELISA was used to measure the level of TNF-α in myocardium. The results demonstrated that fluvastatin treatment markedly decreased ischemic injury caused by ischemia/reperfusion, and inhibited the expression levels of TLR4, TNF-α and NF-κB, all of which up-regulated by ischemia/reperfusion. Taken together, our results suggest that proper dosage of fluvastatin may have protective effect on the ischemic injury mediated by ischemia/reperfusion in the hearts, which might be associated with inhibition of TLR4 signaling pathway and inflammatory response during ischemia/reperfusion.     

未折叠蛋白质的普遍初始热力学亚稳态

探索和理解蛋白质折叠问题一直是分子生物学、结构生物学和生物物理学的终极挑战.未折叠的蛋白质应该存在一种普遍初始热力学亚稳态,否则无法解释蛋白质是如何在剧烈的热振动干扰下完成快速精确折叠的.本文通过分析水溶液环境和蛋白质折叠的相关性,揭示了一种由水分子屏蔽效应引起的未折叠蛋白质的普遍初始热力学亚稳态,该亚稳态的存在是水溶液环境中水分子的物理性质决定,并赋予未折叠蛋白质抵抗热扰动和避免错误折叠的能力.我们通过研究已发表的实验数据和建立分子模型,找到了该初始热力学亚稳态存在的相关证据,并推测了该亚稳态导致蛋白质精确折叠的相关物理学机制.     

Insights into the Functional Architecture of the Catalytic Center of a Maize β-Glucosidase Zm-p60.1

The maize (Zea mays) beta-glucosidase Zm-p60.1 has been implicated in regulation of plant development by the targeted release of free cytokinins from cytokinin-O-glucosides, their inactive storage forms. The crystal structure of the wild-type enzyme was solved at 2.05-A resolution, allowing molecular docking analysis to be conducted. This indicated that the enzyme specificity toward substrates with aryl aglycones is determined by aglycone aromatic system stacking with W373, and interactions with edges of F193, F200, and F461 located opposite W373 in a slot-like aglycone-binding site. These aglycone-active site interactions recently were hypothesized to determine substrate specificity in inactive enzyme substrate complexes of ZM-Glu1, an allozyme of Zm-p60.1. Here, we test this hypothesis by kinetic analysis of F193I/Y/W mutants. The decreased K(m) of all mutants confirmed the involvement of F193 in determining enzyme affinity toward substrates with an aromatic aglycone. It was unexpected that a 30-fold decrease in k(cat) was found in F193I mutant compared with the wild type. Kinetic analysis and computer modeling demonstrated that the F193-aglycone-W373 interaction not only contributes to aglycone recognition as hypothesized previously but also codetermines catalytic rate by fixing the glucosidic bond in an orientation favorable for attack by the catalytic pair, E186 and E401. The catalytic pair, assigned initially by their location in the structure, was confirmed by kinetic analysis of E186D/Q and E401D/Q mutants. It was unexpected that the E401D as well as C205S and C211S mutations dramatically impaired the assembly of a catalysis-competent homodimer, suggesting novel links between the active site structure and dimer formation.     

Acceleration of R5 HIV replication by polymorphonuclear neutrophils in cultures of macrophages

Cell-to-cell contact between monocyte-derived macrophages (MDM) and endothelial cells has resulted in the increased proliferation of CC chemokine receptor 5/M-tropic (R5) human immunodeficiency virus (HIV) in MDM. In the present study, R5 HIV replication was shown to be increased by polymorphonuclear neutrophils (PMN) in MDM cultures through the soluble factors released from these PMN. The replication of R5 HIV in MDM was greatly enhanced when PMN were added to cultures. An increase in the replication of R5 HIV was also demonstrated when the virus was replicated in MDM cultured in a double chamber transwell with PMN. Chemokine ligand (CCL) 2 and interleukin (IL)-10 were detected in culture fluids of PMN exposed to R5 HIV. The replication of R5 HIV was not accelerated in cultures of MDM and PMN in a double chamber transwell supplemented with a mixture of monoclonal antibodies directed against CCL2 and IL-10. Similarly, the replication of R5 HIV was accelerated in MDM cultures supplemented with a mixture of recombinant CCL2 and IL-10. These results indicated that, in response to the viral stimulation, PMN produce CCL2 and IL-10 and enhance the replication of R5 HIV in MDM cultures.     

Preparation, crystallization and preliminary X-ray analysis of threonine synthase from Streptococcus mutans

The thrC gene of Streptococcus mutans encodes threonine synthase, which is a potential target for drug design. To study the structure and function of the enzyme, the thrC gene was amplified from Streptococcus mutans genomic DNA and cloned into the expression vector pET28alpha. The protein was expressed in Escherichia coli in soluble form and purified to homogeneity. Crystals suitable for X-ray diffraction were obtained by hanging-drop vapor diffusion method. The crystal diffracted to 2.5 A and belonged to space group P3(1) or P3(2), with unit cell parameters a=b=60.39 A, c=118.62 A.