A Novel Integrated Method Tor Large-scale Detection,Identification, and Quantification of Widely Targeted Metabolites： Application in the Study of Rice Metabolomics

Liquid chromatography-mass spectrometry （LC-MS）-based metabolomics has been facilitated by the con- struction of MSz spectral tag （MS2T） library from the total scan ESI MS/MS data, and the development of widely targeted metabolomics method using MS/MS data gathered from authentic standards. In this report, a novel strategy called step- wise multiple ion monitoring-enhanced product ions （stepwise MIM-EPI） was developed to construct the MS2T library, in which stepwise MIM was used as survey scans to trigger the acquisition of EPI. A total number of 698 （almost） non- redundant metabolites with MS2 spectra were obtained, of which 135 metabolites were identified/annotated. Integrating the data gathered from our MS2T library and other available multiple reaction monitoring （MRM） information, a widely targeted metabolomics method was developed to quantify 277 metabolites, including some phytohormones. Evaluation of the dehydration responses and natural variations of these metabolites in rice leaf not only suggested the coordinated regulation of abscisic acid （ABA） with metabolites such as serotonin derivative（s）, polyamine conjugates under drought stress, but also revealed some C-glycosylated flavones as the potential markers for the discrimination of indica and japonica rice subspecies. The new MS2T library construction and widely targeted metabolomics strategy could be used as a tool for rice functional genomics.     

The neurotoxicity of iron,copper and cobalt in Parkinson’s disease through ROS-mediated mechanisms

Parkinson’s disease (PD) is the second most common neurodegenerative disease with gradual loss of dopaminergic neurons. Despite extensive research in the past decades, the etiology of PD remains elusive. Nevertheless, multiple lines of evidence suggest that oxidative stress is one of the common causes in the pathogenesis of PD. It has also been suggested that heavy metal-associated oxidative stress may be implicated in the etiology and pathogenesis of PD. Here we review the roles of redox metals, including iron, copper and cobalt, in PD. Iron is a highly reactive element and deregulation of iron homeostasis is accompanied by concomitant oxidation processes in PD. Copper is a key metal in cell division process, and it has been shown to have an important role in neurodegenerative diseases such as PD. Cobalt induces the generation of reactive oxygen species (ROS) and DNA damage in brain tissues.     

青藏高原动物地理区的地位和东部界线问题

本文从历史时空的角度分析了青藏高原地区发生的鱼类区系的变化过程,和高原鱼类区系演化的相对独立性,认为这一鱼类区系的分化直接反映了高原隆升事件,并应当在动物地理区划上得到客观反映,即将青藏高原作为一个独立的区划单元。由于青藏高原的隆升和造成古北区、东洋区分化的第三纪末、第四纪初的全球性气候变冷在时间上相近、波及的范围都巨大,共同促成了欧亚大陆古北区、东洋区和青藏高原区特有类群的分化,作为对这些地史事件反映的青藏高原区、古北区和东洋区,在动物地理区划上应该具有相同的地位．另外,依据高原鱼类的分布范围和青藏高原对非高原鱼类的阻碍作用,讨论了青藏高原的界限及其划分问题。     

Site-specific recombination of the tal-1 gene is a common occurrence in human T cell leukemia.

The tal-1 gene is altered as a consequence of the t(1;14) (p32;q11) chromosome translocation observed in 3% of patients with T cell acute lymphoblastic leukemia (T-ALL). tal-1 encodes a helix-loop-helix (HLH) domain, a DNA binding and dimerization motif found in a number of proteins involved in cell growth and differentiation. We now report that an additional 25% of T-ALL patients bear tal-1 gene rearrangements that are not detected by karyotype analysis. These rearrangements result from a precise 90 kb deletion (designated tald) that arises independently in different patients by site-specific DNA recombination. Since the deletion junctions resemble the coding joints of assembled immunoglobulin genes, tald rearrangements are likely to be mediated by aberrant activity of the immunoglobulin recombinase. Moreover, t(1;14)(p32;q11) translocations and tald rearrangements disrupt the coding potential of tal-1 in an equivalent manner, and thereby generate a common genetic lesion shared by a significant proportion of T-ALL patients.     

突变靶基因xylE转基因小鼠

本研究以ｐＥＳｎｘ穿梭质粒为载体,选用恶臭假单孢杆菌ＴＯＬ质粒上的ｘｙｌＥ基因作为突变靶基因组构建的重组构件,经微注射导入ＩＣＲ小鼠５４９枚受精卵雄原核,将存活的３５２枚卵移入２４只假孕鼠输卵管内,７只妊娠,共产仔４１只,其中７只死胎,出生后死亡４只,３０只存活。注射卵存活率为６４％（３５２／５４９）,出生率为１１．６％（４１／３５２）。存活鼠经ＰＣＲ－Ｓｏｕｔｈｅｒｎ检测,整合率为５７％（１７／３０）。在整合阳性鼠中选择了杂交信号较强的２只当代公鼠,通过回收载体和转化试验,结果表明整合基因完整,具有转化的功能,由此,建立了突变靶基因ｘｙｌＥ转基因小鼠模型。     

N-糖基化位点突变的人IFN-λ1在毕赤酵母中的表达、纯化及表征

IFN-λ1是Ⅲ型干扰素家族的一个成员,具有与Ⅰ型干扰素相似的功能。此前,我们已经从毕赤酵母表达获得了可溶性重组人干扰素-λ1。然而,毕赤酵母表达中的高糖基化带来了免疫原性,影响了蛋白质的生产纯化效率。为了克服这个缺点,文中构建了一种干扰素突变体 (rhIFN-λ1-Nm),定点突变潜在糖基化位点。AOX1启动子与α因子信号序列存在的情况下,用甲醇诱导成功地实现了rhIFN-λ1-Nm在毕赤酵母GS115胞外分泌表达。对rhIFN-λ1-Nm进行纯化,获得了纯度>98%的产品,并对糖化水平、分子量、二级结构、N末端序列等理化性质和生物活性进行了研究。研究结果表明,rhIFN-λ1-Nm糖基化水平明显降低,蛋白质生产纯化收率显著提高,而对结构和生物活性无影响;糖基化位点突变rhIFN-λ1可以被开发为IFN-λ1的替代品,有望发展成为未来的生物免疫制剂。     

Tumor-specific idiotype vaccines. III. Induction of T helper cells by anti-idiotype and tumor cells

In a previous report, we have demonstrated the induction of tumor-specific immunity by monoclonal anti-idiotype antibodies generated against a monoclonal anti-tumor antibody, 11C1, that also cross-reacts with mouse mammary tumor virus envelope glycoprotein gp52. Also, we showed that whereas one anti-idiotype antibody, 2F10, could induce protective immunity, another anti-idiotype antibody, 3A4, induced nonprotective immunity. Here we demonstrated the existence of T helper cells which recognize anti-idiotypes that exert differential controls on tumor growth. The qualitative nature of idiotype recognizing T cells generated in response to 2F10, 3A4, irradiated tumor, and progressively growing tumor was compared. The reactivity pattern of idiotype recognizing T cells obtained from 2F10 and irradiated tumor immunized mice were similar in nature in the sense that Lyt-2- T cells obtained from these immunized mice responded to both 2F10 and 3A4 as antigen, although T cells from tumor immunized mice responded better to 3A4 antigen. On the other hand, the idiotype-recognizing T cells obtained from 3A4-immunized mice showed a similar reactivity pattern to T cells isolated from mice during the early phase of tumor growth (within day 4 to 5 after the inoculation of 10(4) live tumor cells). Lyt-2- T cells isolated from mice immunized with 3A4 or during the early phase of tumor growth responded only to 3A4 antigen. The inability of Lyt-2- T cells, isolated from 4- to 5-day-old tumor in mice, to cooperate with 2F10-TNP is not due to the absence of 2F10 idiotype recognizing T cells as 2F10 id recognizing T cells are present when examined at the precursor level. These data on the idiotype specificity of T helper cells show a correlation with the presence of anti-tumor immunity. This information will help in the design and application of idiotype vaccine in tumor immunotherapy.