T-DNA vector backbone sequences are frequently integrated into the genome of transgenic plants obtained by Agrobacterium-mediated transformation

Transgenic Arabidopsis and tobacco plants (125) derived from seven Agrobacterium-mediated transformation experiments were screened by polymerase chain reaction and DNA gel blot analysis for the presence of vector `backbone' sequences. The percentage of plants with vector DNA not belonging to the T-DNA varied between 20% and 50%. Neither the plant species, the explant type used for transformation, the replicon type nor the selection seem to have a major influence on the frequency of vector transfer. Only the border repeat sequence context could have an effect because T-DNA vector junctions were found in more than 50% of the plants of three different transformation series in which T-DNAs with octopine borders without inner border regions were used. Strikingly, many transgenic plants contain vector backbone sequences linked to the left T-DNA border as well as vector junctions with the right T-DNA border. DNA gel blots indicate that in most of these plants the complete vector sequence is integrated. We assume that integration into the plant genome of complete vector backbone sequences could be the result of a conjugative transfer initiated at the right border and subsequent continued copying at the left and right borders, called read-through. This model would imply that the left border is not frequently recognized as an initiation site for DNA transfer and that the right border is not efficiently recognized as a termination site for DNA transfer.     

Magnesium-induced inner membrane aggregation in heart mitochondria: prevention and reversal by carboxyatractyloside and bongkrekic acid

Mg(2+) at an optimal concentration of 2mM (ph 6.5) induces large increases (up to 30 percent) in the optical density of bovine heart mitochondria incubated under conditions of low ionic strength (< approx. 0.01). The increases are associated with aggregation (sticking together) of the inner membranes and are little affected by changes in the energy status of the mitochondria. Virtually all of a number of other polyvalent cations tested and Ag(+) induce increases in mitochondrial optical density similar to those induced by Mg(2+), their approximate order of concentration effectiveness in respect to Mg(2+) being: La(3+) > Pb(2+) = Cu(2+) > Cd(2+) > Zn(2+) > Ag(+) > Mn(2+) > Ca(2+) > Mg(2+). With the exception of Mg(2+), all of these cations appear to induce swelling of the mitochondria concomitant with inner membrane aggregation. The inhibitors of the adenine nucleotide transport reaction carboxyatratyloside and bongkrekic acid are capable of preventing and reversing Mg(2+)-induced aggregation at the same low concentration required for complete inhibition of phosphorylating respiration, suggesting that they inhibit the aggregation by binding to the adenine nucleotide carrier. The findings are interpreted to indicate (a) that the inner mitochondrial membrane is normally prevented from aggregating by virtue of its net negative outer surface change, (b) that the cations induce the membrane to aggregate by binding at its outer surface, decreasing the net negative charge, and (c) that carboxyatractyloside and bongkrekic acid inhibit the aggregation by binding to the outer surface of the membrane, increasing the net negative charge.     

Phenological models of development in Pandemis heparana and Adoxophyes orana for timing the application of Insect Growth Regulators with juvenile-hormone activity

Control of leafrollers using Insect Growth Regulators with juvenile-hormone acitivity (IGR) is a major issue in research on Integrated Pest Management in apple orchards. The IGR is applied at the time of emergence of the last-larval instar of leafrollers, thus causing a disturbance of metamorphosis.Simulation models on the development of Pandemis heparana (Denn. et Schiff.) and Adoxophyes orana (F.v.R.) were developed, partly on the basis of experiments, partly on data from literature, to predict the time of emergence of the various stages, particularly of the last-larval instar and the pupa. The models use the state-variable approach, and include only temperature as a driving variable.Simulated curves of emergence of last-instar larvae, pupae and moths corresponded well with observations on field-collected larvae, reared to adult stage in an outdoor insectary. The curves of pheromone trap catches showed a delay relative to the calculated and observed curves for the eclosion of pupae.To investigate whether the time of IGR application could be related to a temperature sum, the relation between emergence curves of last-instar larvae and temperature sums was studied for several years. For this purpose simulated curves were used, because observations on emergence of last-instar covered only a few years.

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Résumé Le contrôle des Tordeuses par les régulateurs de croissance d'Insectes (IGR), à activité d'hormone juvénile, est un progrès majeur dans la recherche pour la lutte intégrée contre les ennemis des vergers de pommiers.L'IGR appliqué lors de l'apparition du dernier stade larvaire des Tordeuses, perturbe ainsi la métamorphose ultérieure. Afin de prévoir le moment d'apparition des différents stades, et plus particulièrement du dernier stade larvaire, des modèles de simulation du développement de Pandemis heparana (Denn. et Schiff.) et Adoxophyes orana (F.v.R.) ont été élaborés à partir d'expériences et en se basant sur des résultats de la littérature.Le modèle est basé sur l'examen de la variable d'état, la température étant la variable discriminante suivie.Les courbes simulées d'apparition des larves de dernier stade, des nymphes et des papillons correspondent aux observations faites sur les larves récoltées dans la nature et élevées jusqu'au stade adulte dans un insectarium en plein air.Le taux de capture dans les pièges à phéromone présente un retard par rapport aux courbes calculées et observées pour l'éclosion des nymphes. Différentes causes peuvent être attribuées à cette différence, mais l'influence d'aucune d'elles n'a été étudiée.Afin de déterminer si le moment de l'application d'IGR peut être lié à une somme de températures, les courbes d'apparition des larves de dernier stade ont été étudiées en relation avec les sommes de températures portant sur plusieurs années. Les observations concernant l'apparition des larves de dernier stade ne couvrant que 2 années, des courbes simulées ont été utilisées à cet effet. L'emploid de la relation liant le moment de l'apparition à la somme des températures permet de n'avoir à calculer que les sommes de températures pour déterminer le moment opportun de l'application des IGR.

     

Chromosomal toxin-antitoxin loci can diminish large-scale genome reductions in the absence of selection

Superintegrons (SIs) are chromosomal genetic elements containing assemblies of genes, each flanked by a recombination sequence (attC site) targeted by the integron integrase. SIs may contain hundreds of attC sites and intrinsic instability is anticipated; yet SIs are remarkably stable. This implies that either selective pressure maintains the genes or mechanisms exist which favour their persistence in the absence of selection. Toxin/antitoxin (TA) systems encode a stable toxin and a specific, unstable antitoxin. Once activated, the continued synthesis of the unstable antitoxin is necessary for cell survival. A bioinformatic search of accessible microbial genomes for SIs and TA systems revealed that large SIs harboured TA gene cassettes while smaller SIs did not. We demonstrated the function of TA loci in different genomic contexts where large-scale deletions can occur; in SIs and in a 165 kb dispensable region of the Escherichia coli genome. When devoid of TA loci, large-scale genome loss was evident in both environments. The inclusion of two TA loci, relBE1 and parDE1, which we identified in the Vibrio vulnificus SI rendered these environments refractory to gene loss. Thus, chromosomal TA loci can stabilize massive SI arrays and limit the extensive gene loss that is a hallmark of reductive evolution.     

The effect of dissolved oxygen and aeration rate on antibiotic production of Streptomyces fradiae

Different dissolved oxygen concentrations and aeration rates were imposed on a stable mutant of Streptomyces fradiae during the antibiotic-producing phase. At high aeration rate (1 vvm), the tylosin yield in the fermentor broth with dissolved oxygen (DO) concentrations controlled close to 100% saturation (6-8 ppm) increased 10% as against uncontrolled. The rates of cellular growth, oil consumption, and tylosin production were severely reduced when DO concentration fell below 25% saturation, but all resumed to their initial rates when DO was raised to saturation level again. The DO concentration in combination with air flow rate affected the pattern of the antibiotics produced. At high DO levels, an additional macrolide antibiotic, macrocin, was synthesized to more than one-third the amount of tylosin at high aeration rate (1 vvm). On the other hand, tylosin production rate remained constant and no significant amount of macrocin was produced at low aeration rate (0.2 vvm).     

Transferrin receptor activity in rat mammary epithelial cells

The binding of 125I-transferrin to rat mammary cells isolated by collagenase and hyaluronidase digestion has been investigated. Surface binding was determined at 4 degrees C and total binding also at 4 degrees C but in the presence of 0.1% w/v saponin. KD values between 20 and 25 nM were obtained. Binding assays at 37 degrees C showed the internalisation of the receptor and the bound transferrin was occurring but also provided evidence for an impaired recycling of the receptors to the cell surface in the freshly isolated cells. No differences in total binding were observed in cells prepared at different stages of lactation with a mean value of 29 fmol transferrin bound/micrograms cellular DNA, equivalent to 180,000 receptors per cell.     

Terpenoid composition of three fossil resins from Cretaceous and Tertiary conifers

The terpenoid composition of three fossil resins from macrofossils of Cretaceous and Tertiary conifers has been analyzed by gas chromatography–mass spectrometry (GC–MS). The mono-, sesqui- and diterpenoids which have been identified in the resin extracts are derived from precursors produced by the respective source plants and may be used as chemosystematic markers when compared with terpenoids in extant conifers. Sesquiterpenoids (cedrene, cuparene, cadinanes) and phenolic diterpenoids (ferruginol and derivatives) are the major components in Cupressospermum saxonicum Mai (Miocene). The terpenoid characteristics strongly support a relationship to the Cupressaceae s. str. The resin of Doliostrobus taxiformis (Sternberg) Kva ek (Eocene) consists of abietane and pimarane type resin acids accompanied by minor amounts of phenolic diterpenoids (ferruginol, hinokiol). According to morphological and anatomical characteristics, D. taxiformis was previously compared to both, extant Araucariaceae and Cupressaceae s.l., but the terpenoid pattern of the resin now supports a relationship to the Cupressaceae s.l. rather than to Araucariaceae. Degraded diterpenoids of the abietane type are the major compounds in the extract of Tritaenia linkii (Roemer) Mägdefrau et Rudolf (Lower Cretaceous) indicating considerable oxidative alteration of the resin. Since the terpenoids in the resin of T. linkii are highly degraded or belong to the common abietane class, the leaves cannot be assigned or compared to any modern family based on their terpenoid composition. The presence of ferruginol probably excludes pinaceous affinities. Terpenoids proved to be valuable chemosystematic markers for fossil conifers once they are adequately preserved. The analysis of resin extracts by GC–MS is a suitable tool for the investigation of soluble compounds in fossil plants.