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101.
We investigated leaf anatomy and micromorphology in the New World Vitis using light and scanning electron microscopy to understand the correlation of these traits to molecular phylogenetic relationships and environmental affinity. We observed traits known to differ among species of Vitis with importance in traditional taxonomy of Vitis: trichome type, stomata morphology, mesophyll organization, and midrib vascularization. We found that traits associated with water conductance and photosynthesis comprised the highest loadings of axis one of a principal components analysis (PCA) while traits related to gas exchange (i.e., the stomatal apparatus) had high loadings on axis two. Using the PCA, we identified seven clusters of species, which showed little correlation to recently reported molecular phylogenetic relationships. Moreover, analyses using Bayes Traits and Bayesian Binary Method revealed little to no phylogenetic signal in trait evolution. PCA axes one and two separated species occurring in dry southwestern North American habitats from those in mesic places. For example, a cluster of V. monticola and V. arizonica occurred adjacent to a cluster of V. californica and V. girdiana in ordination space, and the latter three species share key leaf anatomical traits. Nevertheless, among these, only V. arizonica and V. girdiana are closely related according to molecular phylogeny. Thus, the leaf micromorphological/anatomical traits of Vitis observed in this study are highly correlated with environment, but not phylogenetic relationships. We expect that trait similarities among distantly related species may result from evolutionary convergences, especially within xeric habitats of western North America. 相似文献
102.
Yue-Ping Ma Liang Zhao Wen-Jie Zhang Ying-Hua Zhang Xia Xing Xia-Xia Duan Jing Hu AJ Harris Pei-Liang Liu Si-Lan Dai Jun Wen 《植物分类学报:英文版》2020,58(6):925-944
The origins of cultivated chrysanthemums have attracted considerable attention, but they remain poorly known. Here, we reconstructed the phylogeny of representative well‐known cultivars and wild species of the genus Chrysanthemum using chloroplast genomes and the nuclear LEAFY gene. Our results suggest that geographic and ecological factors may determine the opportunities for wild species to be involved in the origin of the cultivars. The wild species C. indicum, C. zawadskii, C. dichrum, C. nankingense, C. argyrophyllum, and C. vestitum were likely directly or indirectly involved as paternal species of most of the chrysanthemum cultivars examined in this study. Yet, the maternal species is supported to be a lineage of an extinct wild Chrysanthemum species and its subsequent cultivars, as all accessions of chrysanthemum cultivars sampled formed a strongly supported clade, distinct from all other species of Chrysanthemum in the plastome tree. Thus, the cultivated chrysanthemums originated from multiple hybridizations involving several paternal species rather than only two or a few wild species, with an extinct species and its subsequent cultivars serving as the maternal parents. This finding is consistent with Chrysanthemum having high rates of hybridization and gene flow, which has been demonstrated within previous studies; nevertheless, it is important to unravel the role of an extinct wild Chrysanthemum species as the ultimate maternal parent species for all the chrysanthemum cultivars. Our results also suggest that C. vestitum from Tianzhu and Funiu Mountains in Anhui and Henan Provinces of China represent two distinct cryptic species. 相似文献
103.
104.
Jurriaan J H?lzenspies Willem Stoorvogel Ben Colenbrander Bernard AJ Roelen Dagmar R Gutknecht Theo van Haeften 《BMC developmental biology》2009,9(1):8
Background
Mammalian oocytes acquire competence to be fertilized during meiotic maturation. The protein kinase CDC2 plays a pivotal role in several key maturation events, in part through controlled changes in CDC2 localization. Although CDC2 is involved in initiation of maturation, a detailed analysis of CDC2 localization at the onset of maturation is lacking. In this study, the subcellular distribution of CDC2 and its regulatory proteins cyclin B and SPDY in combination with several organelle markers at the onset of pig oocyte maturation has been investigated. 相似文献105.
The availability of genomic and proteomic data from across the tree of life has made it possible to infer features of the genome and proteome of the last universal common ancestor (LUCA). A number of studies have done so, all using a unique set of methods and bioinformatics databases. Here, we compare predictions across eight such studies and measure both their agreement with one another and with the consensus predictions among them. We find that some LUCA genome studies show a strong agreement with the consensus predictions of the others, but that no individual study shares a high or even moderate degree of similarity with any other individual study. From these observations, we conclude that the consensus among studies provides a more accurate depiction of the core proteome of the LUCA and its functional repertoire. The set of consensus LUCA protein family predictions between all of these studies portrays a LUCA genome that, at minimum, encoded functions related to protein synthesis, amino acid metabolism, nucleotide metabolism, and the use of common, nucleotide‐derived organic cofactors. 相似文献
106.
van de Loo FA 《Arthritis research & therapy》2011,13(2):111
It has long been recognized that laboratory tests are useful in the diagnosis of disease and to monitor treatment outcome.
Their performance has become even more demanding with the development of personalized medicine. In patients with rheumatoid
arthritis (RA) the standard biochemical tests measure serological markers of disease, such as C-reactive protein, and RA-associated
auto-antibodies, such as rheumatoid factor and anti-citrullinated protein antibodies. The information obtained from these
markers does not, however, provide a complete picture of the disease and treatment efficacy. New biomarkers based on cytokine
receptor complexes are promising for RA theragnostics. 相似文献
107.
We sequenced the entire control region and portions of flanking genes
(tRNA(Phe), tRNA(Glu), and ND6) in the common chaffinch (Fringilla
coelebs), blue chaffinch (F. teydea), brambling (F. montifringilla), and
greenfinch (Carduelis chloris). In these finches the control region is
similar in length (1,223-1,237 bp) and has the same flanking gene order as
in other birds, and contains a putative TAS element and the highly
conserved CSB-1 and F, D, and C boxes recognizable in most vertebrates.
Cloverleaf-like structures associated with the TAS element at the 5' end
and CSB-1 at the 3' end of the control region may be involved with the stop
and start of D-loop synthesis, respectively. The pattern of nucleotide and
substitution bias is similar to that in other vertebrates, and consequently
the finch control region can be subdivided into a central, conserved G-rich
domain (domain II) flanked by hypervariable 5'-C-rich (domain I) and
3'-AT-rich (domain III) segments. In pairwise comparisons among finch
species, the central domain has unusually low transition/transversion
ratios, which suggests that increased G + T content is a functional
constraint, possibly for DNA primase efficiency. In finches the relative
rates of evolution vary among domains according to a ratio of 4.2 (domain
III) to 2.2 (domain I) to 1 (domain II), and extensively among sites within
domains I and II. Domain I and III sequences are extremely useful in
recovering intraspecific phylogeographic splits between populations in
Africa and Europe, Madeira, and a basal lineage in Nefza, Tunisia. Domain
II sequences are highly conserved, and are therefore only useful in
conjunction with sequences from domains I and III in phylogenetic studies
of closely related species.
相似文献
108.
109.
110.
Alienke J. Wijmenga-Monsuur Els van Westen Mirjam J. Knol Riet M. C. Jongerius Marta Zancolli David Goldblatt Pieter G. M. van Gageldonk Irina Tcherniaeva Guy A. M. Berbers Nynke Y. Rots 《PloS one》2015,10(12)