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101.
Mort ME Archibald JK Randle CP Levsen ND O'Leary TR Topalov K Wiegand CM Crawford DJ 《American journal of botany》2007,94(2):173-183
Plant molecular systematic studies of closely related taxa have relied heavily on sequence data from nuclear ITS and cpDNA. Positive attributes of using ITS sequence data include the rapid rate of evolution compared to most plastid loci and availability of universal primers for amplification and sequencing. On the other hand, ITS sequence data may not adequately track organismal phylogeny if concerted evolution and high rDNA array copy number do not permit identification of orthologous copies. Shaw et al. (American Journal of Botany 92: 142-166) recently identified nine plastid regions that appear to provide more potentially informative characters than many other plastid loci. In the present study, sequences of these loci and ITS were obtained for six taxonomic groups in which phylogenetic relationships have been difficult to establish using other data. The relative utility of these regions was compared by assessing the number of parsimony informative characters, character congruence, resolution of inferred trees, clade support, and accuracy. No single locus emerged as the best in all lineages for any of these measures of utility. Results further indicated that in preliminary studies, sampling strategy should include at least four exemplar taxa. The importance of sampling data from independent distributions is also discussed. 相似文献
102.
Rajapandian Kanagaraj Miguel B. Araujo Rathin Barman Priya Davidar Rahul De Dinesh K. Digal G. V. Gopi A. J. T. Johnsingh Kashmira Kakati Stephanie Kramer‐Schadt Babu R. Lamichhane Salvador Lyngdoh M. D. Madhusudan Muneer Ul Islam Najar Jyotirmayee Parida Narendra M. B. Pradhan Jean‐Philippe Puyravaud R. Raghunath P. P. Abdul Rahim K. Muthamizh Selvan Naresh Subedi Antonio Trabucco Swati Udayraj Thorsten Wiegand Amirtharaj C. Williams Surendra P. Goyal 《Diversity & distributions》2019,25(5):822-838
103.
Zhou Zhiyong Mitchell Rebecca Mans Gutman Julie Wiegand Ryan E Mwandama Dyson A Mathanga Don P Skarbinski Jacek Shi Ya Ping 《Malaria journal》2014,13(1):1-10
Background
Metarhizium anisopliae is a naturally occurring fungal pathogen of mosquitoes. Recently, Metarhizium has been engineered to act against malaria by directly killing the disease agent within mosquito vectors and also effectively blocking onward transmission. It has been proposed that efforts should be made to minimize the virulence of the fungal pathogen, in order to slow the development of resistant mosquitoes following an actual deployment.Results
Two mathematical models were developed and analysed to examine the efficacy of the fungal pathogen. It was found that, in many plausible scenarios, the best effects are achieved with a reduced or minimal pathogen virulence, even if the likelihood of resistance to the fungus is negligible. The results for both models depend on the interplay between two main effects: the ability of the fungus to reduce the mosquito population, and the ability of fungus‐infected mosquitoes to compete for resources with non‐fungus‐infected mosquitoes.Conclusions
The results indicate that there is no obvious choice of virulence for engineered Metarhizium or similar pathogens, and that all available information regarding the population ecology of the combined mosquito‐fungus system should be carefully considered. The models provide a basic framework for examination of anti‐malarial mosquito pathogens that should be extended and improved as new laboratory and field data become available. 相似文献104.
Melissa A. Briggs Admirabilis Kalolella Katia Bruxvoort Ryan Wiegand Gerard Lopez Charles Festo Pierre Lyaruu Mitya Kenani Salim Abdulla Catherine Goodman S. Patrick Kachur 《PloS one》2014,9(4)
Background
Throughout Africa, many people seek care for malaria in private-sector drug shops where diagnostic testing is often unavailable. Recently, subsidized artemisinin-based combination therapies (ACTs), a first-line medication for uncomplicated malaria, were made available in these drug shops in Tanzania. This study assessed the prevalence of malaria among and purchase of ACTs by drug shop clients in the setting of a national ACT subsidy program and sub-national drug shop accreditation program.Method and Findings
A cross-sectional survey of drug shop clients was performed in two regions in Tanzania, one with a government drug shop accreditation program and one without, from March-May, 2012. Drug shops were randomly sampled from non-urban districts. Shop attendants were interviewed about their education, training, and accreditation status. Clients were interviewed about their symptoms and medication purchases, then underwent a limited physical examination and laboratory testing for malaria. Malaria prevalence and predictors of ACT purchase were assessed using univariate analysis and multiple logistic regression. Amongst 777 clients from 73 drug shops, the prevalence of laboratory-confirmed malaria was 12% (95% CI: 6–18%). Less than a third of clients with malaria had purchased ACTs, and less than a quarter of clients who purchased ACTs tested positive for malaria. Clients were more likely to have purchased ACTs if the participant was <5 years old (aOR: 6.6; 95% CI: 3.9–11.0) or the shop attendant had >5 years, experience (aOR: 2.8; 95% CI: 1.2–6.3). Having malaria was only a predictor of ACT purchase in the region with a drug shop accreditation program (aOR: 3.4; 95% CI: 1.5–7.4).Conclusion
Malaria is common amongst persons presenting to drug shops with a complaint of fever. The low proportion of persons with malaria purchasing ACTs, and the high proportion of ACTs going to persons without malaria demonstrates a need to better target who receives ACTs in these drug shops. 相似文献105.
106.
Brumm H Mühlhaus J Bolze F Scherag S Hinney A Hebebrand J Wiegand S Klingenspor M Grüters A Krude H Biebermann H 《Obesity (Silver Spring, Md.)》2012,20(5):1074-1081
Aminoglycoside-mediated read-through of stop codons was recently demonstrated for a variety of diseases in vitro and in vivo. About 30 percent of human genetic diseases are the consequence of nonsense mutations. Nonsense mutations in obesity-associated genes like the melanocortin 4 receptor (MC4R), expressed in the hypothalamus, show the impact of premature stop codons on energy homeostasis. Therefore, the MC4R could be a potential pharmaceutical target for obesity treatment and targeting MC4R stop mutations could serve as proof of principle for nonsense mutations in genes expressed in the brain. We investigated four naturally occurring nonsense mutations in the MC4R (W16X, Y35X, E61X, Q307X) located at different positions in the receptor for aminoglycoside-mediated functional rescue in vitro. We determined localization and amount of full-length protein before and after aminoglycoside treatment by fluorescence microscopy, cell surface and total enzyme linked immunosorbent assay (ELISA). Signal transduction properties were analyzed by cyclic adenosine monophosphate (cAMP) assays after transient transfection of MC4R wild type and mutant receptors into COS-7 cells. Functional rescue of stop mutations in the MC4R is dependent on: (i) triplet sequence of the stop codon, (ii) surrounding sequence, (iii) location within the receptor, (iv) applied aminoglycoside and ligand. Functional rescue was possible for W16X, Y35X (N-terminus), less successful for Q307X (C-terminus) and barely feasible for E61X (first transmembrane domain). Restoration of full-length proteins by PTC124 could not be confirmed. Future pharmaceutical applications must consider the potency of aminoglycosides to restore receptor function as well as the ability to pass the blood-brain barrier. 相似文献
107.
T. A. Johnston † S. D. Kaufman M. D. Moles ‡ M. D. Wiegand § W. C. Leggett 《Journal of fish biology》2008,72(10):2634-2644
The effects of delayed fertilization on embryonic viability in walleye Sander vitreus were examined using laboratory fertilization and incubation trials. Both fertilization success (survival to 10 h post-fertilization) and embryonic survival (from 10 to 168 h post-fertilization) generally declined with increasing ova storage time but trends varied significantly among females. Embryonic survival of individual egg batches was positively related to fertilization success. The slope of the relationship between fertilization success and ova storage time was negatively related to maternal fork length indicating that ova quality declined more rapidly with storage time for larger females than for smaller females. In contrast, the slope of the early embryonic survival v. ova storage time relationship was not significantly related to maternal size. 相似文献
108.
The betaretrovirus Mason-Pfizer monkey virus selectively excludes simian APOBEC3G from virion particles
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Doehle BP Bogerd HP Wiegand HL Jouvenet N Bieniasz PD Hunter E Cullen BR 《Journal of virology》2006,80(24):12102-12108
The APOBEC3 protein family can constitute a potent barrier to the successful infection of mammalian species by retroviruses. Therefore, any retrovirus that has evolved the ability to replicate in a given animal must have developed mechanisms that allow it to avoid or inhibit the APOBEC3 proteins expressed in that animal. Here, we demonstrate that Mason-Pfizer monkey virus (MPMV) is resistant to inhibition by the APOBEC3G protein expressed in its normal host, the rhesus macaque, but highly susceptible to inhibition by murine APOBEC3 (mA3). MPMV virion particles fail to package rhesus APOBEC3G (rA3G), and MPMV Gag binds rA3G poorly in coexpressing cells. In contrast, MPMV virions package mA3 efficiently and MPMV Gag-mA3 complexes are readily detected. Moreover, mA3, but not rA3G, partially colocalizes with MPMV Gag in the cytoplasm of coexpressing cells. Previously, we have demonstrated that murine leukemia virus also escapes inhibition by APOBEC3 proteins by avoiding virion incorporation of its cognate APOBEC3 protein, mA3, yet is inhibited by primate APOBEC3G proteins, which it packages effectively (B. P. Doehle, A. Sch?fer, H. L. Wiegand, H. P. Bogerd, and B. R. Cullen, J. Virol. 79:8201-8207, 2005). The finding that two essentially unrelated beta- and gammaretroviruses use similar mechanisms to escape inhibition by the APOBEC3 proteins found in their normal host species suggests that the selective exclusion of APOBEC3 proteins from virion particles may be a general mechanism used by simple mammalian retroviruses. 相似文献
109.
Aristides Moustakas Kerstin Wiegand Stephan Getzin David Ward Katrin M. Meyer Matthias Guenther Karl-Heinz Mueller 《Acta Oecologica》2008,33(3):355-364
Nearest tree neighbour distances and the tree spatial formation on a large scale over time and space replicates were examined. The study was conducted in a natural savanna ecosystem in the Southern Kalahari, South Africa. Nearest tree neighbour and point pattern analysis methods were used to investigate changes in the spatial pattern of trees in two plots. Trees larger than 2 m canopy diameter were mapped. We used aerial photographs of the study area from 1940, 1964, 1984, 1993, and a satellite image from 2001 to follow two plots over time. Field work was carried out too for classification accuracy. We were able to identify and individually follow over 2400 individual trees from 1940 until 2001. Nearest neighbour analysis results indicate that dead trees were on average closer to their nearest neighbouring trees than living trees were to their neighbours. Most dead trees were on average 6 m from their nearest neighbours, while most living trees were about 20 m apart. Point pattern analysis results show a cyclical transition from clumped to random and sequentially to regular tree spacing. These transitions were not correlated across two plots. Generally, decreases in small-scale clumping coincided with periods of high mortality. Our findings show that regular, clumped, and random tree pattern can occur, pending on time, location, and scale within the location. 相似文献
110.
Genome-wide SNP genotyping highlights the role of natural selection in Plasmodium falciparum population divergence
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Daniel E Neafsey Stephen F Schaffner Sarah K Volkman Daniel Park Philip Montgomery Danny A Milner Jr Amanda Lukens David Rosen Rachel Daniels Nathan Houde Joseph F Cortese Erin Tyndall Casey Gates Nicole Stange-Thomann Ousmane Sarr Daouda Ndiaye Omar Ndir Soulyemane Mboup Marcelo U Ferreira Sandra do Lago Moraes Aditya P Dash Chetan E Chitnis Roger C Wiegand Daniel L Hartl Bruce W Birren Eric S Lander Pardis C Sabeti Dyann F Wirth 《Genome biology》2008,9(12):R171-16