Targeting of antigen to the herpesvirus entry mediator augments primary adaptive immune responses

Interactions between the herpesvirus entry mediator (HVEM) and the B- and T-lymphocyte attenuator (BTLA) inhibit B and T cell activation. HVEM-BTLA interactions are blocked by herpes simplex virus (HSV) glycoprotein D (gD) through binding of its N-terminal domain to the BTLA binding site of HVEM. In this study, we inserted viral antigens into the C-terminal domain of gD and expressed these antigens with plasmid or E1-deleted (replication-defective) adenovirus vectors. Viral antigens fused to gD induced T and B cell responses to the antigen that were far more potent than those elicited by the same antigen expressed without gD. The immunopotentiating effect required binding of the gD chimeric protein to HVEM. Overall, the studies demonstrate that targeting of antigen to the BTLA binding site of HVEM augments the immunogenicity of vaccines.     

Decadal vegetation changes in a northern peatland, greenhouse gas fluxes and net radiative forcing

Thawing permafrost in the sub‐Arctic has implications for the physical stability and biological dynamics of peatland ecosystems. This study provides an analysis of how permafrost thawing and subsequent vegetation changes in a sub‐Arctic Swedish mire have changed the net exchange of greenhouse gases, carbon dioxide (CO₂) and CH₄ over the past three decades. Images of the mire (ca. 17 ha) and surroundings taken with film sensitive in the visible and the near infrared portion of the spectrum, [i.e. colour infrared (CIR) aerial photographs from 1970 and 2000] were used. The results show that during this period the area covered by hummock vegetation decreased by more than 11% and became replaced by wet‐growing plant communities. The overall net uptake of C in the vegetation and the release of C by heterotrophic respiration might have increased resulting in increases in both the growing season atmospheric CO₂ sink function with about 16% and the CH₄ emissions with 22%. Calculating the flux as CO₂ equivalents show that the mire in 2000 has a 47% greater radiative forcing on the atmosphere using a 100‐year time horizon. Northern peatlands in areas with thawing sporadic or discontinuous permafrost are likely to act as larger greenhouse gas sources over the growing season today than a few decades ago because of increased CH₄ emissions.     

Miocene methane‐derived carbonates from southwestern Washington,USA and a model for silicification at seeps

Kuechler, R.R., Birgel, D, Kiel, S, Freiwald, A, Goedert, J.L., Thiel, V & Peckmann, J. 2011: Miocene methane‐derived carbonates from southwestern Washington, USA and a model for silicification at seeps. Lethaia, Vol. 45, pp. 259–273. Exotic limestone masses with silicified fossils, enclosed within deep‐water marine siliciclastic sediments of the Early to Middle Miocene Astoria Formation, are exposed along the north shore of the Columbia River in southwestern Washington, USA. Samples from four localities were studied to clarify the origin and diagenesis of these limestone deposits. The bioturbated and reworked limestones contain a faunal assemblage resembling that of modern and Cenozoic deep‐water methane‐seeps. Five phases make up the paragenetic sequence: (1) micrite and microspar; (2) fibrous, banded and botryoidal aragonite cement, partially replaced by silica or recrystallized to calcite; (3) yellow calcite; (4) quartz replacing carbonate phases and quartz cement; and (5) equant calcite spar and pseudospar. Layers of pyrite frequently separate different carbonate phases and generations, indicating periods of corrosion. Negative δ¹³C_carbonate values as low as ?37.6‰ V‐PDB reveal an uptake of methane‐derived carbon. In other cases, δ¹³C_carbonate values as high as 7.1‰ point to a residual, ¹³C‐enriched carbon pool affected by methanogenesis. Lipid biomarkers include ¹³C‐depleted, archaeal 2,6,10,15,19‐pentamethylicosane (PMI; δ¹³C: ?128‰), crocetane and phytane, as well as various iso‐ and anteiso‐carbon chains, most likely derived from sulphate‐reducing bacteria. The biomarker inventory proves that the majority of the carbonates formed as a consequence of sulphate‐dependent anaerobic oxidation of methane. Silicification of fossils and early diagenetic carbonate cements as well as the precipitation of quartz cement – also observed in other methane‐seep limestones enclosed in sediments with abundant diatoms or radiolarians – is a consequence of a preceding increase of alkalinity due to anaerobic oxidation of methane, inducing the dissolution of silica skeletons. Once anaerobic oxidation of methane has ceased, the pH drops again and silica phases can precipitate. □Biomarkers, carbonates, isotopes, methane, Miocene, silicification, Washington.     

Absolutes und relatives Wachstum bei Ammonoideen

The following basic growth parameters of the ammonoid shell are analysed: radius of the coiling spiral; whorl width; plane of cross-section; umbilical spiral. The absolute growth of these parameters follows a general growth formula which is based on the probability theory (time-dependent stochastic processes). The in crease of all basic parameters is ruled by analogous formulas which are derived from the general growth formula; the increase of the coiling spiral results in the geometrical figure of a logarithmic spiral, because this is the only one that meets the conditions of the general growth formula. The relative growth can be described as a morphogenetic program that is subdivided in presumably three formally connected subprograms. Each subprogram is defined by specific allometry and integration constants.
Folgende Grundparameter des Wachstums von Ammonoideen-Gehäusen werden analysiert: Radius der äuβeren Spirale, Windungsbreite, Querschnittsfläche, Nabelspirale. Das absolute Wachstum dieser Parameter folgt einer allgemeinen Wachstumsformel, die sich aus der Wahrscheinlichkeitstheorie (zeitabhängige stochastische Prozesse) ergibt. Die Zunahme aller Grundparameter folgt analogen Formeln, die sich aus der allgemeinen Wachstumsformel ableiten lassen; das Anwachsen des äuβeren RadiS führt zur geometrischen Figur einer logarith-mischen Spirale, da nur diese der allgemeinen Wachstumsformel genügt. Das relative Wachstum läβt sich als ein morphogenetisches Wachstumsprogramm beschreiben, das sich in vermutlich drei formal miteinander verknüpfte Unter-programme aufteilt. Jedes Unterprogramm ist durch spezifische Allometrie- und Integrationskonstanten festgelegt.     

Some effects of humidity on the light reaction of photosynthesis in the lichens Cladonia impexa and Collema flaccidium

Luminescence and fluorescence were measured at different relative humidities in the lichen Cladonia impexa Harm. Both parameters showed a constant value at relative humidities lower than 80%: thereafter they increased. Low relative humidity was found to decrease energy transfer from chlorophyll b to chlorophyll a. inhibit electron transport, lower electron holding capacity on the reduced side of photosystem two and impair far-red-induced afterglow, reflecting photophosphorylation. In Collema flaccidium Ach. Ach. energy transfer from the accessory pigments phycocyanin and phycoerythrin to chlorophyll a was only possible at high relative humidity. The results are interpreted as due to conformational changes caused by changed water content in the lichen.     

1:1 Distribution between Induced Mutants and Phenocopies

BY ultraviolet irradiation of germiings of the multicellular alga Ulva mutabilis Føyn, it is possible to obtain chimaeric plants which consist of two morphologically different parts of different genetic constitution, one part wild type and the other mutant^{1, 2}. Other plants found have been identical in appearance to the chimaeras, though the morphologically different parts were both genetically wild type. They should be considered phenocopies of the genetic chimaeras. Surprisingly, the genetical chimaeras and their phenocopies were found in equal numbers. This observation and the previous one that only complete mutations are found after ultraviolet irradiation of Ulva cells¹, can be explained if only one of the two strands in the DNA molecule is genetically conserved.     

The State of Protochlorophyll and Chlorophyll in Corn Roots

The protochlorophyll(ide) present in primary roots of dark-grown corn (Zea mays) seedlings has an in vivo absorption maximum at 634 nm. Red light converts the pigment to chlorophyll(ide) a with an absorption maximum at 675 nm.     

Genomic Circuitry Underlying Immunological Response to Pediatric Acute Respiratory Infection

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Photosynthetic CO2 fixation in spinach chloroplasts inhibited by pine chloroplasts or extracts of pine chloroplasts

Chloroplasts isolated from pine needles were found to be inactive with respect to CO₂ fixation. Since it was suspected that pine needles may contain substances inhibitory to photosynthesis, studies were carried out using photosynthetically active isolated spinach chloroplasts and chloroplasts isolated from pine needles. When isolated pine chloroplasts were suspended in buffer and were added to isolated spinach chloroplasts they inhibited photosynthetic CO₂ fixation. When the pine chloroplasts were separated from the medium by centrifugation, the separated pine chloroplasts severely inhibited CO₂ fixation by isolated spinach chloroplasts, but the supernatant solution from the pine chloroplasts was not inhibitory. As little as 5% pine chloroplasts (based on chlorophyll content) produced 50% inhibition of CO₂ fixation by the spinach chloroplasts. Studies of fixation of ¹⁴C-labelled CO₂ by spinach chloroplasts were carried out in which after 5 min photosynthesis the pine chloroplasts were added. It was found that the subsequent inhibition of spinach CO₂ fixation was neither due to any effect on the rate of export of photosynthetic metabolites from the chloroplasts to the medium, nor to a direct effect on the RUBP carboxylase reaction. The principal effect was found to be an inhibition of the conversion of fructose-1,6-bisphosphate and sedoheptulose-1,7-bisphosphate to the respective monophosphates and inorganic phosphate. From this finding it was concluded that a principal effect of the inhibition by pine chloroplasts is probably an inhibition either directly or indirectly of the bisphosphatase enzymes in the spinach chloroplasts. Based on its distribution between organic and aqueous acidic or neutral solutions, the inhibitory factor of the pine chloroplasts must be lipophilic. Most of the factor could be transferred to an aqueous phase in a strongly alkaline solution. Following subsequent acidification of the aqueous phase the activity could be completely transferred back into the organic phase. This procedure allowed for separation of the inhibitory factor from most of the pigments and other lipophilic substances present in the pine chloroplasts and yielded a preparation which could be subsequently fractionated by thin layer chromatography. UV absorption was found in two fast moving spots and at the origin. The fastest running spot from the thin layer chromatography plate was found to be the one containing most of the inhibitory activity.