Effects of Temperature on Transcriptome Profiles in Cardiocrinum cathayanum Leaves

Russian Journal of Plant Physiology - Cardiocrinum cathayanum (Endl.) Lindl. (Liliaceae) is a promising species for ornamental and pharmaceutical usage. However, genomic responses of C. cathayanum...     

The crosstalk between lncRNAs and the Hippo signalling pathway in cancer progression

LncRNAs play a pivotal role in the regulation of epigenetic modification, cell cycle, differentiation, proliferation, migration and other physiological activities. In particular, considerable studies have shown that the aberrant expression and dysregulation of lncRNAs are widely implicated in cancer initiation and progression by acting as tumour promoters or suppressors. Hippo signalling pathway has attracted researchers’ attention as one of the critical cancer‐related pathways in recent years. Increasing evidences have demonstrated that lncRNAs could interact with Hippo cascade and thereby contribute to acquisition of multiple malignant hallmarks, including proliferation, metastasis, relapse and resistance to anti‐cancer treatment. Specifically, Hippo signalling pathway is reported to modulate or be regulated by widespread lncRNAs. Intriguingly, certain lncRNAs could form a reciprocal feedback loop with Hippo signalling. More speculatively, lncRNAs related to Hippo pathway have been poised to become important putative biomarkers and therapeutic targets in human cancers. Herein, this review focuses on the crosstalk between lncRNAs and Hippo pathway in carcinogenesis, summarizes the comprehensive role of Hippo‐related lncRNAs in tumour progression and depicts their clinical diagnostic, prognostic or therapeutic potentials in tumours.     

不同除草剂的田间杂草防效及对糜子生长发育的影响

筛选糜子适宜除草剂来防范农田药害,是糜子高效安全生产和改善生态环境亟待解决的关键问题。本研究以粳性糜子品种‘榆糜2号'为材料,探究22种除草剂对糜子田间杂草的防除效果及对糜子生长发育的影响。结果表明: 1)喷施土壤封闭型除草剂谷友、丁草胺、莠去津、苄嘧·丙草胺和茎叶型除草剂苯唑·二甲钠、阔世玛、藤净、陶氏·优先、阔菲后,基本无药害作用,糜子幼苗生长正常,其余除草剂均对糜子有不同程度的药害影响;2)参试的22种除草剂在糜子田中对杂草均表现出一定的防除效果,总体而言,土壤封闭型除草剂的杂草防效相对优于茎叶型除草剂,但所有参试除草剂对糜子株高、功能叶片叶绿素含量、单株穗重均造成不同程度的影响;3)与人工除草相比,参试除草剂均导致糜子产量有不同程度的下降;但与不除草对照相比,部分除草剂有明显的增产增效作用。土壤封闭型除草剂中,谷友、丁草胺、莠去津、苄嘧·丙草胺的杂草防效较好,较不除草对照增产60%以上;茎叶型除草剂中,阔世玛、苯唑·二甲钠的杂草防效较好,较不除草对照增产50%以上。因此,在糜子出苗前可用38%莠去津或44%单嘧磺隆进行土壤封闭处理,或在出苗后喷施茎叶型除草剂3.6%二磺·甲碘隆或55%苯唑·二甲钠,农田杂草防效较好,且对糜子生长发育的负面影响较小。     

末次盛冰期以来观光木的潜在地理分布变迁

观光木(Tsoongiodendron odorum)是木兰科的古老残遗物种, 目前正面临严峻的生存威胁, 属于极小种群濒危植物。通过生态位模型(ENM)能够重建观光木地理分布格局的历史变迁, 探究气候变化对该物种分布的影响, 并了解其地理分布与气候需求间的关系, 从而为全球变暖背景下观光木的保护提供理论基础。该文基于96条现代分布记录和8个环境变量, 采用最大熵(MaxEnt)模型模拟观光木在末次盛冰期、全新世中期、现代和未来(2061-2080年, RCP 8.5)的潜在分布区, 利用SDM toolbox分析观光木的地理空间变化, 并综合贡献率、置换重要值和Jackknife检验来评估气候因子的重要性。研究结果表明: (1)观光木的高度适生区在南岭地区, 末次盛冰期时没有大尺度向南退缩, 很可能在山区避难所原地存活; (2)在全新世中期和未来两个增温的气候情境下, 观光木的分布区均表现为缩减, 其中未来分布的减幅更大, 表明气候变暖对观光木的生长有一定的负面影响; (3)总体上看, 观光木各个时期的地理分布范围相对稳定, 说明观光木对气候变化有一定的适应能力, 人为活动或自身繁育问题可能是致濒的重要原因, 并建议对广东和广西群体进行优先保护。     

The complete chloroplast genome of Myriophyllum spicatum reveals a 4‐kb inversion and new insights regarding plastome evolution in Haloragaceae

Myriophyllum, among the most species‐rich genera of aquatic angiosperms with ca. 68 species, is an extensively distributed hydrophyte lineage in the cosmopolitan family Haloragaceae. The chloroplast (cp) genome is useful in the study of genetic evolution, phylogenetic analysis, and molecular dating of controversial taxa. Here, we sequenced and assembled the whole chloroplast genome of Myriophyllum spicatum L. and compared it to other species in the order Saxifragales. The complete chloroplast genome sequence of M. spicatum is 158,858 bp long and displays a quadripartite structure with two inverted repeats (IR) separating the large single copy (LSC) region from the small single copy (SSC) region. Based on sequence identification and the phylogenetic analysis, a 4‐kb phylogenetically informative inversion between trnE‐trnC in Myriophyllum was determined, and we have placed this inversion on a lineage specific to Myriophyllum and its close relatives. The divergence time estimation suggested that the trnE‐trnC inversion possibly occurred between the upper Cretaceous (72.54 MYA) and middle Eocene (47.28 MYA) before the divergence of Myriophyllum from its most recent common ancestor. The unique 4‐kb inversion might be caused by an occurrence of nonrandom recombination associated with climate changes around the K‐Pg boundary, making it interesting for future evolutionary investigations.     

Predation of potential insect pests in oil palm plantations,rubber tree plantations,and fruit orchards

In human‐modified landscapes, important ecological functions such as predation are negatively affected by anthropogenic activities, including the use of pesticides and habitat degradation. Predation of insect pests is an indicator of healthy ecosystem functioning, which provides important ecosystem services, especially for agricultural systems. In this study, we compare predation attempts from arthropods, mammals, and birds on artificial caterpillars in the understory, between three tropical agricultural land‐use types: oil palm plantations, rubber tree plantations, and fruit orchards. We collected a range of local and landscape‐scale data including undergrowth vegetation structure; elevation; proximity to forest; and canopy cover in order to understand how environmental variables can affect predation. In all three land‐use types, our results showed that arthropods and mammals were important predators of artificial caterpillars and there was little predation by birds. We did not find any effect of the environmental variables on predation. There was an interactive effect between land‐use type and predator type. Predation by mammals was considerably higher in fruit orchards and rubber tree than in oil palm plantations, likely due to their ability to support higher abundances of insectivorous mammals. In order to maintain or enhance natural pest control in these common tropical agricultural land‐use types, management practices that benefit insectivorous animals should be introduced, such as the reduction of pesticides, improvement of understory vegetation, and local and landscape heterogeneity.     

桂林岩溶石山常绿落叶阔叶混交林乔木层优势物种生态位研究

采用样方法对不同资源位群落进行调查,通过冗余分析（RDA）结合Monte Carlo随机置换检验筛选出对桂林岩溶石山常绿落叶阔叶混交林乔木层优势物种分布影响显著的土壤资源轴（土壤有机质、土壤水溶钙、土壤速效氮、土壤全氮、土壤pH值和土壤厚度）。利用Levins生态位宽度指数和Pianka生态位重叠指数对桂林岩溶石山常绿落叶阔叶混交林乔木层14个优势物种在土壤有机质、土壤水溶钙、土壤速效氮、土壤全氮、土壤pH值和土壤厚度6个土壤资源轴上的生态位特征进行研究。结果表明：（1）在土壤有机质和土壤水溶钙资源轴上,生态位宽度最大值为常绿物种檵木（0.89、0.94）;在土壤pH值资源轴上,生态位宽度最大值为常绿物种粗糠柴（0.96）;在土壤速效氮、土壤全氮和土壤厚度资源轴上,生态位宽度最大值为落叶物种南酸枣（0.87、0.99、0.97）。（2）14个优势物种在6个土壤资源轴上,生态位重叠均值由大到小依次为土壤厚度 > 土壤全氮 > 土壤水溶钙 > 土壤速效氮 > 土壤pH值 > 土壤有机质,且均表现为常绿物种与常绿物种形成的种对生态位重叠均值（0.84） > 常绿物种与落叶物种（0.74） > 落叶物种与落叶物种（0.66）。（3）综合6个土壤资源轴,生态位重叠值≥0.5的种对高达480对,占总种对数的87.91%,暗示桂林岩溶石山常绿落叶阔叶混交林乔木层优势物种在资源匮乏且资源异质性高的特殊生境中存在激烈竞争,且乔木层种间关系相对不稳定。     

胭脂素的生物合成及应用研究进展

由于合成色素对人类健康具有潜在危害,天然色素逐渐受到青睐。胭脂素作为类胡萝卜素物质是世界第二大天然色素,其生物合成途径是国际研究热点,目前尚未被完整解析。文中综述了胭脂素的化学特性与提取方法、合成途径研究及应用现状,比较传统提取方法与新提取技术的特点,阐述胭脂素合成通路相关基因及非生物胁迫对合成通路的影响,介绍胭脂素在食品、医药、化工产业应用现状。由于胭脂素合成通路的研究多停留在转录组水平,大多数基因功能未进行验证,文中提出综合应用基因组学、生物信息学、植物化学等学科技术进行深入研究以解析完整的胭脂素合成途径,为胭脂素合成生物学研究及新药研发奠定基础,促进胭脂素的资源开发及可持续发展。     

途径特异性调控因子介导的链霉菌来源天然产物的产量提升

链霉菌是活性天然产物的重要来源。基因组学研究揭示了链霉菌有巨大的生物合成潜力,平均每株菌拥有20–40个生物合成基因簇。在常规的实验室条件下,大多数链霉菌来源的天然产物产量较低,影响了对其进一步研究和产业化开发。由于链霉菌中天然产物的生物合成受到严格的调控,对于这些调控因子和调控网络的深入研究将有力地促进链霉菌来源的天然产物的发现和开发利用。文中主要综述了近5年来链霉菌来源天然产物生物合成中途径特异性调控因子的研究进展,重点介绍其在提高相应天然产物产量中的应用。