Immunoexpression of aquaporins 1, 2, 3 and 4 in kidney of yak (Bos grunniens) on the Qinghai-Tibetan Plateau

Aquaporins (AQP) 1, 2, 3 and 4 belong to the aquaporin water channel family and play an important role in urine concentration by reabsorption of water from renal tubule fluid. Renal AQPs have not been reported in the yak (Bos grunniens), which resides in the Qinghai Tibetan Plateau. We investigated AQPs 1?4 expressions in the kidneys of Yak using immunohistochemical staining. AQP1 was expressed mainly in the basolateral and apical membranes of the proximal tubules and descending thin limb of the loop of Henle. AQP2 was detected in the apical plasma membranes of collecting ducts and distal convoluted tubules. AQP3 was located in the proximal tubule, distal tubule and collecting ducts. AQP4 was located in the collecting ducts, distal straight tubule, glomerular capillaries and peritubular capillaries. The expression pattern of AQPs 1?4 in kidney of yak was different from other species, which possibly is related to kidney function in a high altitude environment.     

Expression of human alpha-l-fucosyltransferase gene homologs in monkey kidney COS cells and modification of potential fucosyltransferase acceptor substrates by an endogenous glycosidase

Previous investigations on the monkey kidney COS cell line demonstrated the weak expression of fucosylated cell surface antigens and presence of endogenous fucosyltransferase activities in cell extracts. RT-PCR analyses have now revealed expression of five homologs of human fucosyltransferase genes, FUT1, FUT4, FUT5, FUT7, and FUT8, in COS cell mRNA. The enzyme in COS cell extracts acting on unsialylated Type 2 structures is closely similar in its properties to the alpha1,3- fucosyltransferase encoded by human FUT4 gene and does not resemble the product of the FUT5 gene. Although FUT1 is expressed in the COS cell mRNA, it has not been possible to demonstrate alpha1,2- fucosyltransferase activity in cell extracts but the presence of Le(y) and blood-group A antigenic determinants on the cell surface imply the formation of H-precursor structures at some stage. The most strongly expressed fucosyltransferase in the COS cells is the alpha1,6-enzyme transferring fucose to the innermost N -acetylglucosamine unit in N - glycan chains; this enzyme is similar in its properties to the product of the human FUT8 gene. The enzymes resembling the human FUT4 and FUT8 gene products both had pH optima of 7.0 and were resistant to 10 mM NEM. The incorporation of fucose into asialo-fetuin was optimal at 5.5 and was inhibited by 10 mM NEM. This result initially suggested the presence of a third fucosyltransferase expressed in the COS cells but we have now shown that triantennary N- glycans with terminal nonreducing galactose units, similar to those present in asialo-fetuin, are modified by a weak endogenous beta-galactosidase in the COS cell extracts and thereby rendered suitable substrates for the alpha1,6- fucosyltransferase.      

Relative competitive abilities and growth characteristics of a narrowly endemic and a geographically widespread Solidago species (Asteraceae)

Relative competitive ability and growth characteristics of the narrow endemic Solidago shortii were compared to those of the geographically widespread S. altissima. Competition and growth studies were conducted over the entire growing season in an ambient-temperature greenhouse, using a 3:1 (v/v) native limestone soil/river sand mixture. Results from a de Wit replacement series experiment (relative yield, relative yield total, plant height, aggressivity values) with S. shortii, S. altissima, and Festuca arundinacea (common competitor) suggested the following competitive hierarchy: S. altissima = F. arundinacea > S. shortii. Using classical growth analysis, we found that the competitive hierarchy was related closely to components of plant size (dry mass, height, leaf area, leaf area duration) and not to relative growth rate or any of its components (net assimilation rate, leaf area ratio, leaf weight ratio, specific leaf area). Solidago shortii allocated proportionately more dry mass to roots (but not to rhizomes) and had significantly greater root/shoot and (root + rhizome)/shoot ratios than did S. altissima. Thus, while the morphological traits of S. shortii enable it to tolerate drier habitats than S. altissima, in moist sites S. shortii easily would be overtopped and shaded out by S. altissima. Low competitive ability may be one of several factors contributing to the narrow endemism of S. shortii.     

Radicle emergence with increased temperatures following summer dispersal in Trillium camschatcense: A species with deep simple double morphophysiological dormancy in seeds

Seeds with deep simple double morphophysiological dormancy (MPD) need cold stratification during the first winter after dispersal for radicle emergence, followed by the summer for root and bud development and finally a second winter for shoot emergence. In a previous study, we demonstrated that Trillium camschatcense seeds have this type of dormancy with radicles emerging from most seeds after the first winter. However, radicles also emerged from a few seeds in autumn during the same year as dispersal. We thought that temperatures after seed dispersal played a role in radicle emergence before the first winter. To confirm our idea, we investigated germination phenology outdoors, relationships between temperatures after seed dispersal and radicle emergence in the first year outdoors, radicle emergence in the first winter under varied temperatures using incubators, and shoot emergence from seeds with an emerged radicle in the first year outdoors. Our phenology study confirmed that T. camschatcense seeds have deep simple double MPD. Over 7 years, 0.2–7.5% of radicles emerged in the first year before winter and these percentages were moderately positively correlated with temperatures, especially minimum temperatures. Increasing August and September temperatures increased radicle emergence in the laboratory. Shoots emerged from seeds with an emerged radicle in the first year after the first winter. With increased autumn temperatures in warmer regions or with global warming, we predict that germination phenology may shift: increased radicle emergence in the first year and shoot emergence following the first (and not second) winter.     

Identification of putative regulatory upstream ORFs in the yeast genome using heuristics and evolutionary conservation

Background  

The translational efficiency of an mRNA can be modulated by upstream open reading frames (uORFs) present in certain genes. A uORF can attenuate translation of the main ORF by interfering with translational reinitiation at the main start codon. uORFs also occur by chance in the genome, in which case they do not have a regulatory role. Since the sequence determinants for functional uORFs are not understood, it is difficult to discriminate functional from spurious uORFs by sequence analysis.     

Germination niche breadth varies inconsistently among three Asclepias congeners along a latitudinal gradient

• Species responses to climate change will be primarily driven by their environmental tolerance range, or niche breadth, with the expectation that broad niches will increase resilience. Niche breadth is expected to be larger in more heterogeneous environments and moderated by life history. Niche breadth also varies across life stages. Therefore, the life stage with the narrowest niche may serve as the best predictor of climatic vulnerability. To investigate the relationship between niche breadth, climate and life stage we identify germination niche breadth for dormant and non‐dormant seeds in multiple populations of three milkweed (Asclepias) species.
• Complementary trials evaluated germination under conditions simulating historic and predicted future climate by varying cold–moist stratification temperature, length and incubation temperature. Germination niche breadth was derived from germination evenness across treatments (Levins B_n), with stratified seeds considered less dormant than non‐stratified seeds.
• Germination response varies significantly among species, populations and treatments. Cold–moist stratification ≥4 weeks (1–3 °C) followed by incubation at 25/15 °C+ achieves peak germination for most populations. Germination niche breadth significantly expands following stratification and interacts significantly with latitude of origin. Interestingly, two species display a positive relationship between niche breadth and latitude, while the third presents a concave quadratic relationship.
• Germination niche breadth significantly varies by species, latitude and population, suggesting an interaction between source climate, life history and site‐specific factors. Results contribute to our understanding of inter‐ and intraspecific variation in germination, underscore the role of dormancy in germination niche breadth, and have implications for prioritising and conserving species under climate change.