Hypothesis for a serine proteinase-like domain at the COOH terminus of Slowpoke calcium-activated potassium channels

Bovine pancreatic trypsin inhibitor (BPTI) is a 58-residue protein with three disulfide bonds that belongs to the Kunitz family of serine proteinase inhibitors. BPTI is an extremely potent inhibitor of trypsin, but it also specifically binds to various active and inactive serine proteinase homologs with KD values that range over eight orders of magnitude. We previously described an interaction of BPTI at an intracellular site that results in the production of discrete subconductance events in large conductance Ca2+ activated K+ channels (Moss, G.W.J., and E. Moczydlowski. 1996, J. Gen. Physiol, 107:47-68). In this paper, we summarize a variety of accumulated evidence which suggests that BPTI binds to a site on the KCa channel protein that structurally resembles a serine proteinase. One line of evidence includes the finding that the complex of BPTI and trypsin, in which the inhibitory loop of BPTI is masked by interaction with trypsin, is completely ineffective in the production of substate events in the KCa channel. To further investigate this notion, we performed a sequence analysis of the alpha-subunit of cloned slowpoke KCa channels from Drosophila and mammals. This analysis suggests that a region of approximately 250 residues near the COOH terminus of the KCa channel is homologous to members of the serine proteinase family, but is catalytically inactive because of various substitutions of key catalytic residues. The sequence analysis also predicts the location of a Ca(2+)-binding loop that is found in many serine proteinase enzymes. We hypothesize that this COOH-terminal domain of the slowpoke KCa channel adopts the characteristic double-barrel fold of serine proteinases, is involved in Ca(2+)-activation of the channel, and may also bind other intracellular components that regulate KCa channel activity.     

Performance of sampling strategies in the presence of known spatial patterns

In crop protection and ecology accurate and precise estimates of insect populations are required for many purposes. The spatial pattern of the organism sampled, in relation to the sampling scheme adopted, affects the difference between the actual and estimated population density, the bias, and the variability of that estimate, the precision. Field monitoring schemes usually adopt time‐efficient sampling regimes involving contiguous units rather than the most efficient for estimation, the completely random sample. This paper uses spatially‐explicit ecological field data on aphids and beetles to compare common sampling regimes. The random sample was the most accurate method and often the most precise; of the contiguous schemes the line transect was superior to more compact arrangements such as a square block. Bias depended on the relationship between the size and shape of the group of units comprising the sample and the dominant cluster size underlying the spatial pattern. Existing knowledge of spatial pattern to inform the choice of sampling scheme may provide considerable improvements in accuracy. It is recommended to use line transects longer than the grain of the spatial pattern, where grain is defined as the average dimension of clusters over both patches and gaps, and with length at least twice the dominant cluster size.     

Nest location by spool-and-line tracking of dasyurid marsupials in New Guinea

Spool-and-line tracking was used to study the nesting habits of three species of dasyurid marsupial, tentatively identified as Murexia longicaudata, Antechinus naso and A. habbema . Five nests were located; those of M. longicaudata (two individuals) were arboreal and those of A. naso (one individual) and A. habbema (two individuals) subterranean. The roughly spherical nests, approximately 20 cm in diameter, were formed of interwoven plant material (broad leaves, bamboo leaves and ferns). Arboreal nests had a single entrance hole on one side. Subterranean nests were situated from 65 to 100 cm below the ground surface and they were reached through tunnels approximately 4 cm in diameter. Only A. habbema was found nesting communally. All nests contained a variety of invertebrates. The leaf composition and invertebrate fauna of the nests are tabulated.     

Intraspecific Strategic Responses of African Elephants to Temporal Variation in Forage Quality

ABSTRACT Mammalian herbivores adopt foraging strategies to optimize nutritional trade-offs against restrictions imposed by body size, nutritional requirements, digestive anatomy, physiology, and the forage resource they exploit. Selective or generalist feeding strategies scale with body size across species. However, within species, where constraints should be most similar, responses to limitation have rarely been examined. We used African elephants (Loxodonta Africana) to test for changes in seasonal diet quality of individuals of differing body size and sex through measurement of fecal nitrogen and phosphorus. We measured physiological stress response of these age and sex classes to seasonal change by fecal glucocorticoid metabolite levels (i.e., stress hormones). Large body size increased tolerance to lower-quality forage. Adult males and females exhibited divergent trends; females had higher diet quality than males, irrespective of body size. When limited by forage availability or quality during the dry season, diet quality declined across all body sizes, but weaned calves ingested a higher-quality diet than larger-bodied adults. On release from restriction during the wet season, weaned calf nitrogen concentrations were consistently high and stress hormone levels decreased, whereas adult female phosphorus levels were highest and less variable and stress hormone levels were unchanged. The ability to adjust forage quality is an important strategy used to ensure adequate nutritional intake according to body size limitations. Although body size is a key determining factor of dietary differences between adult elephants, foraging strategies are also driven by specific nutritional requirements, which may override the body size effects driving foraging decisions in some cases. The diversity of intraspecific response highlights ecologically segregated entities within a species and should be a concern for population management planning, particularly for threatened species. Fecal diet quality and stress hormone analysis could provide an early and sensitive indicator for monitoring age and sex class responses to resource restriction in high-density elephant populations.     

Synovial explant inflammatory mediator production corresponds to rheumatoid arthritis imaging hallmarks: a cross-sectional study

Introduction

Despite the widespread use of magnetic resonance imaging (MRI) and Doppler ultrasound for the detection of rheumatoid arthritis (RA) disease activity, little is known regarding the association of imaging-detected activity and synovial pathology. The purpose of this study was to compare site-specific release of inflammatory mediators and evaluate the corresponding anatomical sites by examining colour Doppler ultrasound (CDUS) and MRI scans.

Methods

RA patients were evaluated on the basis of CDUS and 3-T MRI scans and subsequently underwent synovectomy using a needle arthroscopic procedure of the hand joints. The synovial tissue specimens were incubated for 72 hours, and spontaneous release of monocyte chemoattractant protein 1 (MCP-1), interleukin 6 (IL-6), macrophage inflammatory protein 1β (MIP-1β) and IL-8 was measured by performing multiplex immunoassays. Bone marrow oedema (BME), synovitis and erosion scores were estimated on the basis of the rheumatoid arthritis magnetic resonance imaging score (RAMRIS). Mixed models were used for the statistical analyses. Parsimony was achieved by omitting covariates with P > 0.1 from the statistical model.

Results

Tissue samples from 58 synovial sites were obtained from 25 patients. MCP-1 was associated with CDUS activity (P = 0.009, approximate Spearman’s ρ = 0.41), RAMRIS BME score (P = 0.01, approximate Spearman’s ρ = 0.42) and RAMRIS erosion score (P = 0.03, approximate Spearman’s ρ = 0.31). IL-6 was associated with RAMRIS synovitis score (P = 0.04, approximate Spearman’s ρ = 0.50), BME score (P = 0.04, approximate Spearman’s ρ = 0.31) and RAMRIS erosion score (P = 0.03, approximate Spearman’s ρ = 0.35). MIP-1β was associated with CDUS activity (P = 0.02, approximate Spearman’s ρ = 0.38) and RAMRIS synovitis scores (P = 0.02, approximate Spearman’s ρ = 0.63). IL-8 associations with imaging outcome measures did not reach statistical significance.

Conclusions

The association between imaging activity and synovial inflammatory mediators underscores the high sensitivity of CDUS and MRI in the evaluation of RA disease activity. The associations found in our present study have different implications for synovial mediator releases and corresponding imaging signs. For example, MCP-1 and IL-6 were associated with both general inflammation and bone destruction, in contrast to MIP-1β, which was involved solely in general synovitis. The lack of association of IL-8 with synovitis was likely underestimated because of a large proportion of samples above assay detection limits among the patients with the highest synovitis scores.