The infection of oranges by Trichoderma viride and mixed infection by Trichoderma viride and Penicillium digitatum

Trichoderma viride spores applied in water to apparently uninjured skin of oranges do not cause lesions. Adding orange juice, rind extract, citric acid or orange essential oil did not influence infection. Oranges became infected only when the stem-end cuts or wounds deeper than 6 mm into oil vesicles were inoculated. Sound oranges in contact with decayed oranges did not become infected. Diphenyl-impregnated wrappers reduced infection. A mixed inoculum of T. viride and Penicillium digitatum caused as fast rotting as P. digitatum, which caused faster rotting than T. viride alone. Lesions infected with P. digitatum could become infected by T. viride but those caused by T. viride did not become infected by P. digitatum. T. viride was antagonistic to P. digitatum in vivo and in vitro, possibly because it produces a heat-labile diffusible substance toxic to P. digitatum.     

THE CONTROL OF FUSARIUM BLIGHT IN OAT SEEDLINGS WITH ANTAGONISTIC SPECIES OF CHAETOMIUM

Forty-seven isolates representing twenty-seven species of Chaetomium were tested for their ability to control seedling blight of oat seedlings caused by Fusarium spp., chiefly F. nivale (Fr.) Ces. In pot tests the majority of the isolates were ineffective, but certain isolates of Chaetomium cochliodes Pall, and C. globosum Kunze gave a large measure of control and were as effective as an organic mercury seed dressing. Control of disease was also obtained when living material was attached to the surface of oat seed and when infested seed was soaked in cell-free filtrates from cultures of isolates which reduced disease in vivo.
Substantial control of disease was obtained when infested seed was sown in soil to which cultures of C. cochliodes had been added 10 months previously. This antagonist was able to grow through unsterile soil in the presence of certain added substrates.
The results of pot experiments were confirmed in field experiments.
Isolates of Chaetomium which controlled disease in pot and field experiments were not strikingly antagonistic to Fusariirm nivale in pure culture on agar media.     

Mitochondrial DNA structure and colony expansion dynamics of New Zealand fur seals (Arctocephalus forsteri) around Banks Peninsula

New Zealand fur seals are one of many pinniped species that survived the commercial sealing of the eighteenth and nineteenth centuries in dangerously low numbers. After the enforcement of a series of protection measures in the early twentieth century, New Zealand fur seals began to recover from the brink of extinction. We examined the New Zealand fur seal populations of Banks Peninsula, South Island, New Zealand using the mitochondrial DNA control region. We identified a panmictic population structure around Banks Peninsula. The most abundant haplotype in the area showed a slight significant aggregated structure. The Horseshoe Bay colony showed the least number of shared haplotypes with other colonies, suggesting a different origin of re-colonisation of this specific colony. The effective population size of the New Zealand fur seal population at Banks Peninsula was estimated at approximately 2500 individuals. The exponential population growth rate parameter for the area was 35, which corresponds to an expanding population. In general, samples from adjacent colonies shared 4.4 haplotypes while samples collected from colonies separated by between five and eight bays shared 1.9 haplotypes. The genetic data support the spill-over dynamics of colony expansion already suggested for this species. Approximate Bayesian computations analysis suggests re-colonisation of the area from two main clades identified across New Zealand with a most likely admixture coefficient of 0.41 to form the Banks Peninsula population. Approximate Bayesian computations analysis estimated a founder population size of approximately 372 breeding individuals for the area, which then rapidly increased in size with successive waves of external recruitment. The population of fur seals in the area is probably in the late phase of maturity in the colony expansion dynamic.     

The upper limit of photosynthetic productivity by phytoplankton: evidence from Ethiopian soda lakes

Photosynthetic production by phytoplankton was studied in two Ethiopian soda lakes, alkalinity 51-67 m-equiv./l, with abundant blue-green algae. The deeper lake, L. Aranguadi, contained extremely dense crops composed almost entirely of SpiruUna (Oscillatoria, Arthrospira) platensis. Measurements of the spectral attenuation of light showed that the most penetrating component was displaced to the red spectral region, and estimates of the chlorophyll a content in umt area of the euphotic zone were often similar to the highest values (～200-300 mg/m²) expected on theoretical grounds. The vertical distribution of photosynthetic activity per unit water volume was of a typical pattern for phytoplankton, with light-inhibition often present, although the euphotic zones did not exceed 0.6 m in depth. From these profiles, computed rates of gross photosynthesis per unit area of lake surface reached a magnitude of 1.4–2.4 g O₂/m².h in both lakes. They were obviously severely limited by self-shading behaviour i n the algal populations. An appreciable inverse relationship between photosynthetic capacity and population density was only found in the densest populations of L. Aranguadi, with chlorophyll a content > 2000 mg/m³, where depressed rates might result from experimental artefacts in closed bottles. In this lake, two independent estimates of gross production, based on the analysis of diurnal changes in the open water, were as high as 43 and 57 g O₂/m². day. Diurnal changes of stratification in the two lakes are described and related to the controlling temperature (density) stratification. They include occasionally complete nocturnal deoxygenation in the deeper lake, evidence of heavy respiratory uptake. The high photosynthetic productivity is interpreted as dependent upon the coupling of high algal contents in the euphotic zone (^S) with high values of photosynthetic capacity (^max)- It is probably favoured by the tropical situation affecting temperature and illumination, by a surplus of dissolved inorganic phosphate, and especially by the considerable reserves of carbon dioxide in these soda lakes.     

Responses of tropical cladocerans to a gradient of resource quality

1. The response of three tropical cladocerans to a gradient of resource quality was compared in a series of growth bioassays using seston collected from five lakes of different depth and trophic structure in Michigan, U.S.A. To assess the food quality in terms of digestibility, assimilation experiments were performed with ³²P‐labelled seston from the same lakes. Animals were also analysed for P‐content in their tissues at the end of these assays. 2. In general, assimilation efficiency was higher when animals fed on seston from shallow compared to deep lakes, and was significantly correlated with growth rates, suggesting that shallow lakes have the best food resources in terms of digestibility and P availability. 3. Results also showed that all cladoceran species responded similarly to the resource gradient, with lower growth rates in deep lakes and higher growth rates in shallow lakes, although the strength of response (sensitivity) was different among the species tested. 4. The cladoceran Moina micrura was the most sensitive species, and also displayed the highest P‐content and maximal growth rate, a pattern consistent with the growth rate hypothesis. 5. However, seston C : P ratio and growth rates in the different resources did not correlate with the animals’ P‐contents, showing an uncoupling between RNA‐phosphorus demands for growth and seston food quality. 6. In conclusion, our results support the idea that digestion resistance in algae is a major constraint to cladocerans in natural plankton communities.     

基于Rag1基因序列变异的鲤形目鱼类系统发育重建:采样策略对生命之树的影响

The phylogenetic relationships of species are fundamental to any biological investigation, including all evolutionary studies. Accurate inferences of sister group relationships provide the researcher with an historical framework within which the attributes or geographic origin of species (or supraspecific groups) evolved. Taken out of this phylogenetic context, interpretations of evolutionary processes or origins, geographic distributions, or speciation rates and mechanisms, are subject to nothing less than a biological experiment without controls. Cypriniformes is the most diverse clade of freshwater fishes with estimates of diversity of nearly 3,500 species. These fishes display an amazing array of morphological, ecological, behavioral, and geographic diversity and offer a tremendous opportunity to enhance our understanding of the biotic and abiotic factors associated with diversification and adaptation to environments. Given the nearly global distribution of these fishes, they serve as an important model group for a plethora of biological investigations, including indicator species for future climatic changes. The occurrence of the zebrafish, Danio rerio, in this order makes this clade a critical component in understanding and predicting the relationship between mutagenesis and phenotypic expressions in vertebrates, including humans. With the tremendous diversity in Cypriniformes, our understanding of their phylogenetic relationships has not proceeded at an acceptable rate, despite a plethora of morphological and more recent molecular studies. Most studies are pre-Hennigian in origin or include relatively small numbers of taxa. Given that analyses of small numbers of taxa for molecular characters can be compromised by peculiarities of long-branch attraction and nodal-density effect, it is critical that significant progress in our understanding of the relationships of these important fishes occurs with increasing sampling of species to mitigate these potential problems. The recent Cypriniformes Tree of Life initiative is an effort to achieve this goal with morphological and molecular (mitochondrial and nuclear) data. In this early synthesis of our understanding of the phylogenetic relationships of these fishes, all types of data have contributed historically to improving our understanding, but not all analyses are complementary in taxon sampling, thus precluding direct understanding of the impact of taxon sampling on achieving accurate phylogenetic inferences. However, recent molecular studies do provide some insight and in some instances taxon sampling can be implicated as a variable that can influence sister group relationships. Other instances may also exist but without inclusion of more taxa for both mitochondrial and nuclear genes, one cannot distinguish between inferences being dictated by taxon sampling or the origins of the molecular data.     

Modelling fallen branch volumes in a temperate eucalypt woodland: implications for large senescent trees and benchmark loads of coarse woody debris

Fallen branches are a substantial component of coarse woody debris and a key ecological resource. The depletion of stocks of coarse woody debris since European settlement has contributed to the degradation of Australian grassy box woodlands, including the loss of biodiversity. Restoration options for remnant woodlands include the augmentation of coarse woody debris stocks. However, the extensive modification of grassy box woodlands has left few reference sites for establishing benchmarks to guide such restoration. In this paper we demonstrate a method for predicting fallen branch debris loads in the absence of reference sites, using data from a yellow box–red gum woodland. Our methodology is in two stages: first, the total volume of branch debris under individual trees was modelled; and second, these models were applied to groups of trees to predict stand‐level loads of fallen branch debris. Although the models were developed for yellow box–red gum woodlands, the methodology would be applicable to other communities that lack reference sites. Predicted benchmark loads of fallen branch debris for yellow box–red gum woodland were between 7.0 m³ ha^?1 and 11.9 m³ ha^?1. Large senescing trees contributed the bulk of fallen branch debris. Model predictions indicated a 100‐cm diameter at breast height (dbh) tree was 10 times more likely to produce debris than a 50‐cm dbh tree, and if debris was present a 100‐cm dbh tree produced approximately 10 times the volume of branch debris produced by a 50‐cm dbh tree. These results highlight the importance of large senescing trees for the production of fallen branch debris and support the keystone role of large trees within remnant woodlands, and the need to conserve these structures. Our results also support the active management of regrowth woodland stands to facilitate the progression of individual trees to maturity and senescence. In particular, thinning of regrowth stands may promote the growth of retained trees, ensuring they contribute to fallen branch debris stocks with a minimum time lag.     

Seasonal and interannual variations in carbon dioxide exchange over a cropland in the North China Plain

In China, croplands account for a relatively large form of vegetation cover. Quantifying carbon dioxide exchange and understanding the environmental controls on carbon fluxes over croplands are critical in understanding regional carbon budgets and ecosystem behaviors. In this study, the net ecosystem exchange (NEE) at a winter wheat/summer maize rotation cropping site, representative of the main cropping system in the North China Plain, was continuously measured using the eddy covariance technique from 2005 to 2009. In order to interpret the abiotic factors regulating NEE, NEE was partitioned into gross primary production (GPP) and ecosystem respiration (R_eco). Daytime R_eco was extrapolated from the relationship between nighttime NEE and soil temperature under high turbulent conditions. GPP was then estimated by subtracting daytime NEE from the daytime estimates of R_eco. Results show that the seasonal patterns of the temperature responses of R_eco and light‐response parameters are closely related to the crop phenology. Daily R_eco was highly dependent on both daily GPP and air temperature. Interannual variability showed that GPP and R_eco were mainly controlled by temperature. Water availability also exerted a limit on R_eco. The annual NEE was ?585 and ?533 g C m^?2 for two seasons of 2006–2007 and 2007–2008, respectively, and the wheat field absorbed more carbon than the maize field. Thus, we concluded that this cropland was a strong carbon sink. However, when the grain harvest was taken into account, the wheat field was diminished into a weak carbon sink, whereas the maize field was converted into a weak carbon source. The observations showed that severe drought occurring during winter did not reduce wheat yield (or integrated NEE) when sufficient irrigation was carried out during spring.     

New and reassessed species of Strobilanthes (Acanthaceae) in the flora of China

Several problems in Strobilanthes Blume (Acanthaceae: Ruelliae) are clarified as a result of collaboration between Chinese and western botanists. Examination of pollen has permitted clear delimitation of four morphologically similar species, Strobilanthes szechuanica (Batalin) J. R. I. Wood & Y. F. Deng, S. labordei H. Lév., S. wakasana Wakasugi & Naruhashi and S. wilsonii J. R. I. Wood & Y. F. Deng, the latter described for the first time in this paper, although first collected more than a hundred years ago. A key is provided to help distinguish these species. The globose, echinulate pollen found in several species from China and Japan and assigned to the genus Championella by Bremekamp is shown by SEM photography to be distinct from other pollen hitherto regarded as the same. Three new species, S. abbreviata Y. F. Deng & J. R. I. Wood, S. lihengiae Y. F. Deng & J. R. I. Wood and S. vallicola Y. F. Deng & J. R. I. Wood are described. S. austinii C. B. Clarke ex W. W. Sm. is lectotypified to show that it is conspecific with S. lamiifolia (Nees) T. Anderson, a species demonstrating trans-Himalayan links. New combinations are made for four species as the authors recognize only a single genus, Strobilanthes within the Strobilanthinae as defined by Bremekamp. S. gongshanensis Tsui and S. aenobarba W. W. Sm. are shown to be only varieties of S. inflata T. Anderson. Illustrations are provided for all new species.  © 2006 The Linnean Society of London, Botanical Journal of the Linnean Society , 2006, 150 , 369–390.