Systematics of Oreobates and the Eleutherodactylus discoidalis species group (Amphibia, Anura), based on two mitochondrial DNA genes and external morphology

We present morphological and molecular (mitochondrial DNA, mtDNA) evidence supporting the validity and monophyly of the genus Oreobates . This genus also includes members of the former Eleutherodactylus discoidalis species group plus Eleutherodactylus heterodactylus . The presence of prominent conical subarticular tubercles and prominent supernumerary tubercles associated with the axis of fingers and toes, the presence of glandular axillary pads, and the absence of vocal sacs are proposed as morphological synapomorphies. Species of this taxon form a well-supported crown clade in a phylogeny including members of the genera Craugastor and Eleutherodactylus s.l. The sister taxon to Oreobates is the Eleutherodactylus martinicensis series; Oreobates does not appear to be closely related to the Eleutherodactylus binotatus series or to members of the Eleutherodactylus dolops and Eleutherodactylus nigrovittatus species groups. The taxonomic status of all species of Oreobates is reassessed. Hylodes philippi and Hylodes verrucosus are removed from the synonymy of Oreobates quixensis . We redescribe Oreobates cruralis on the basis of the holotype and new material from Bolivia and Peru, and restrict its distribution to the humid forests of the lowlands and adjacent foothills of the Andes, from southern Peru to central Bolivia. Oreobates granulosus is rediscovered, redescribed, and resurrected, on the basis of the examination of the holotype and additional material from Peru. Phylogenetic analyses of partial 16S mtDNA are used to test the independence of lineages (species). The 14 species of Oreobates are distributed from southern Ecuador to northern Argentina. © 2008 The Linnean Society of London, Zoological Journal of the Linnean Society , 2008, 152 , 737–773.     

The Eocene Arctic Azolla bloom: environmental conditions, productivity and carbon drawdown

Enormous quantities of the free-floating freshwater fern Azolla grew and reproduced in situ in the Arctic Ocean during the middle Eocene, as was demonstrated by microscopic analysis of microlaminated sediments recovered from the Lomonosov Ridge during Integrated Ocean Drilling Program (IODP) Expedition 302. The timing of the Azolla phase (~48.5 Ma) coincides with the earliest signs of onset of the transition from a greenhouse towards the modern icehouse Earth. The sustained growth of Azolla , currently ranking among the fastest growing plants on Earth, in a major anoxic oceanic basin may have contributed to decreasing atmospheric p CO₂ levels via burial of Azolla -derived organic matter. The consequences of these enormous Azolla blooms for regional and global nutrient and carbon cycles are still largely unknown. Cultivation experiments have been set up to investigate the influence of elevated p CO₂ on Azolla growth, showing a marked increase in Azolla productivity under elevated (760 and 1910 ppm) p CO₂ conditions. The combined results of organic carbon, sulphur, nitrogen content and ¹⁵N and ¹³C measurements of sediments from the Azolla interval illustrate the potential contribution of nitrogen fixation in a euxinic stratified Eocene Arctic. Flux calculations were used to quantitatively reconstruct the potential storage of carbon (0.9–3.5 10¹⁸ gC) in the Arctic during the Azolla interval. It is estimated that storing 0.9 10¹⁸ to 3.5 10¹⁸ g carbon would result in a 55 to 470 ppm drawdown of p CO₂ under Eocene conditions, indicating that the Arctic Azolla blooms may have had a significant effect on global atmospheric p CO₂ levels through enhanced burial of organic matter.     

A Na+-DEPENDENT SYSTEM A AND ASC-INDEPENDENT AMINO ACID TRANSPORT SYSTEM STIMULATED BY GLUCAGON IN RAT HEPATOCYTES

The effects of glucagon on amino acid transport in rat hepatocytes are not fully understood. We examined the effect of this hormone on alanine, serine and cysteine preferring system (system ASC)-mediated amino acid transport in rat hepatocyte monolayers using 2-aminoisobutyric acid (AIB) and L -cysteine. Glucagon induced a time and protein synthesis-dependent stimulation of Na⁺-dependent alanine preferring system (system A)-independent AIB transport. The glucagon-induced increase in transport activity was not modified by substrate starvation and not related to changes in the intracellular pool of amino acids. Glucagon did not modify system ASC activity measured by L -cysteine. Therefore the transport activity of AIB independent of system A stimulated by glucagon cannot be attributed to system ASC. This suggests a Na⁺-dependent transport system in rat hepatocytes not identified until now.     

The systematic relationships of glucosinolate-producing plants and related families: a cladistic investigation based on morphological and molecular characters

A cladistic analysis is performed using 94 morphological and biochemical characters for 42 genera to compare a phylogeny based on morphological data with those obtained using different genes ( rbc L, atp B, 18S RNA, mat K) or their combination with morphological data, and to understand the floral evolution within the expanded Brassicales (Capparales) relative to Sapindales and Malvales. The tree produced with morphological data is congruent with those obtained from macromolecular studies in obtaining a well-supported glucosinolate-producing clade and an expanded Sapindales. The combined analysis of the morphological and molecular characters is generally well resolved with support for many of the relationships. The inclusion of the fossil taxon Dressiantha demonstrates the value of inserting fossil evidence in phylogenetic analyses. However, the fossil appears to be related to the Anacardiaceae and not to the Brassicales. The core Brassicales are well supported by a number of synapomorphies, although the internal position of Tovariaceae and Pentadiplandraceae is not well resolved. Emblingiaceae appears to be related to Bataceae and Salvadoraceae. Several significant morphological characters are mapped on the combined trees and their evolutionary significance is discussed. Within Brassicales and Sapindales several well supported clades can be recognized which merit ordinal or subordinal status, putting the present orders at a higher level; these include: Tropaeolales, Setchellanthales, Batidales, Brassicales (Brassiciflorae), Burserales, Sapindales and Rutales (Sapindiflorae). The present scheme of affinities within the Brassicales corresponds well with a gradual morphological evolution in the order.  © 2006 The Linnean Society of London, Botanical Journal of the Linnean Society , 2006, 151 , 453–494.     

The effect of seed morphology on the potential dispersal of aquatic macrophytes by the common carp (Cyprinus carpio)

1. The potential for seed dispersal by fish (ichthyochory) will vary among aquatic plants because of differences in seed size and morphology. 2. To examine how seed morphology influences the probability of dispersal by the common carp (Cyprinus carpio), we studied seed ingestion, retention time and subsequent egestion and germination of seeds of Sparganium emersum and Sagittaria sagittifolia, two aquatic plant species with similar sized but morphologically different seeds. 3. We compared dispersal probabilities between the two plant species, in which the probability of dispersal is assumed to be a function of the probabilities of seed ingestion, egestion and germination, and the dispersal distance is assumed to be a function of seed egestion rate over time. 4. We found that, although the soft seeds of S. sagittifolia had an approximately 1.5 times higher probability of being ingested by the carp than the hard seeds of S. emersum (83.15% ± 1.8% versus 56.16% ± 2.7%, respectively), the latter had an almost twofold higher probability of surviving the passage through the digestive tract (38.58% ± 2.7% versus 20.97% ± 1.5%, respectively). Patterns of seed egestion over time did not differ between the two plant species, despite the difference in seed morphology. Gut passage had a different effect on seed germination between plant species. Compared with non‐ingested controls, seeds of S. emersum showed a 12.6% increase in germination and a 2.1 day acceleration in germination rate, whereas seeds of S. sagittifolia displayed a 47.3% decrease and 5.1 day delay, respectively. 5. Our results suggest that seed morphology affects the dispersal probability and postdispersal establishment, but not the dispersal distance, of aquatic plants that are dispersed by fish.     

Food and humidity affect sex pheromone ratios in the stink bug, Euschistus heros

Abstract.  Male stink bugs, Euschistus heros , only produce the three-component sex pheromone blend consisting of methyl-(2 E ,4 Z )-decadienoate, methyl-2,4,6-trimethyldodecanoate and methyl-2,4,6-trimethyltridecanoate in a constant ratio of 53 : 3 : 44, respectively, when provided with a food source (green beans, Phaseolus vulgaris ). When volatiles are collected from insects with drinking water, humidified air, or under dry conditions, the insects stop producing two components (methyl-2,4,6-trimethyldodecanoate and methyl-2,4,6-trimethyltridecanoate) after 1 day and increase the amount of defensive compounds produced [e.g. ( E )-2-hexenal, decane]. Methyl-2,4,6-trimethyltridecanoate is able to change the behaviour of females but not males. Dual-choice olfactometer bioassays with synthetic standards of all three components, as well as the ternary mixture in the correct ratio, induce a response from females but not males, indicating that all three components have a role in sexual communication. Thus, the dietary conditions under which volatile collections are carried out are crucial for determination of the precise sex pheromone blend.     

Characterization of methanogenic and prokaryotic assemblages based on mcrA and 16S rRNA gene diversity in sediments of the Kazan mud volcano (Mediterranean Sea)

The diversity of the methyl‐coenzyme reductase A (mcrA) and 16S rRNA genes was investigated in gas hydrate containing sediment from the Kazan mud volcano, eastern Mediterranean Sea. mcrA was detected only at 15 and 20 cm below seafloor (cmbsf) from a 40‐cm long push core, while based on chemical profiles of methane, sulfate, and sulfide, possible anaerobic oxidation of methane (AOM) depth was inferred at 12–15 cmbsf. The phylogenetic relationships of the obtained mcrA, archaeal and bacterial 16S rRNA genes, showed that all the found sequences were found in both depths and at similar relative abundances. mcrA diversity was low. All sequences were related to the Methanosarcinales, with the most dominant (77.2%) sequences falling in group mcrA‐e. The 16S rRNA‐based archaeal diversity also revealed low diversity and clear dominance (72.8% of all archaeal phylotypes) of the Methanosarcinales and, in particular, ANME‐2c. Bacteria showed higher diversity but 83.2% of the retrieved phylotypes from both sediment layers belonged to the δ‐Proteobacteria. These phylotypes fell in the SEEP‐SRB1 putative AOM group. In addition, the rest of the less abundant phylotypes were related to yet‐uncultivated representatives of the Actinobacteria, Spirochaetales, and candidate divisions OP11 and WS3 from gas hydrate‐bearing habitats. These phylotype patterns indicate that AOM is occurring in the 15 and 20 cmbsf sediment layers.     

Impacts of Cyclone Larry on arboreal folivorous marsupials endemic to upland rainforests of the Atherton Tableland,Australia

Abstract Intense cyclones might be expected to adversely affect populations of arboreal mammals, either directly or as a consequence of the destruction of food resources and other key habitat elements. However, such impacts have rarely been quantified. The present study examined the response of five species of arboreal folivorous marsupials to Severe Cyclone Larry at nine sites in upland rainforests of the Atherton Tableland, north‐east Australia. Sites were originally surveyed for folivores in 1995–1997, and then resurveyed in 2006, 6–8 months after Cyclone Larry had traversed the region. All sites showed evidence of structural damage to vegetation, but overall damage levels (assessed in terms of canopy cover, damage to trees, basal area of dead trees and volume of woody debris) decreased from east to west across the study region. The detectability of rainforest possums increased after the cyclone. For the most commonly observed species, the proportion of individuals observed >5 m from survey transects was correlated with the amount of structural damage to vegetation. To avoid confounding changes in detectability with changes in abundance, only observations close (<5 m) to transects were used to estimate folivore abundance before and after the cyclone. On this basis, there were no significant differences between pre‐ and post‐cyclone abundance estimates for any folivore species. Further, changes in folivore abundance after the cyclone were not correlated with damage to vegetation across sites. Cyclone Larry does not appear to have caused a catastrophic loss of key habitat resources for marsupial folivores at the sites surveyed. The high degree of folivory practiced by marsupial folivores may help make them resilient to cyclone impacts. These conclusions are more robust for three commonly observed folivore species (Hemibelideus lemuroides, Pseudochirulus herbertensis and Trichosurus vulpecula johnstonii) than for two less frequently encountered species (Pseudochirops archeri and Dendrolagus lumholtzi).