A phylogenetic study of the neotropical catfish family Cetopsidae (Osteichthyes, Ostariophysi, Siluriformes), with a new classification

A hypothesis on the phylogenetic relationships of the neotropical catfish family Cetopsidae is proposed on the basis of the parsimony analysis of 127 morphological characters and most of the species currently recognized. The family and its two recognized subfamilies, the Cetopsinae and Helogeninae, are corroborated as monophyletic, in agreement with recent studies. Previously proposed classifications of the Cetopsinae, however, were found to be poorly representative of the phylogenetic relationships within the subfamily. Major generic rearrangements are implemented in order that the classification of the Cetopsinae reflects the phylogenetic hypothesis. Pseudocetopsis Bleeker (1862) was found to be polyphyletic and to include several disjunct lineages. One of these lineages, recently named as the genus Cetopsidium Vari, Ferraris, and de Pinna (2005), is the sister group to the rest of the Cetopsinae. Denticetopsis Ferraris (1996) is the next sister group to the remainder of the Cetopsinae. The remaining species of the Cetopsinae belong to one of two sister genera, Paracetopsis Bleeker (1862) and Cetopsis Spix and Agassiz (1829). The latter genus includes species formerly assigned to Hemicetopsis Bleeker (1862), Bathycetopsis Lundberg and Rapp Py‐Daniel (1994) and Pseudocetopsis Bleeker (1862). Continued recognition of Hemicetopsis and Bathycetopsis would have required the creation of several additional new genera for various species previously in Pseudocetopsis that form a series of sister groups to a clade composed of Cetopsis oliveirai (Lundberg and Rapp Py‐Daniel, 1994), C. coecutiens (Lichtenstein, 1819) and C. candiru (Spix and Agassiz, 1829). Cetopsis oliveirai is a highly paedomorphic species that displays surprising similarities with conditions in juvenile specimens of C. coecutiens, a species that attains a large body size. Such similarities are not evident in adult specimens of the latter species. A new classification is proposed, within which the subfamily Cetopsinae consists of three tribes, the Cetopsidiini, the Cetopsini and the Denticetopsini. The results of the study form the basis for a discussion of the phylogenetic position of the family within the Siluriformes, the phylogenetic biogeography of the Cetopsidae, paedomorphosis and gigantism in the family, and the effect of different semaphoronts on the intrafamilial phylogeny. Journal compilation © 2007 The Linnean Society of London, Zoological Journal of the Linnean Society, 2007, 150 , 755–813. No claim to original US government works.     

Drought impact on water use efficiency and intra‐annual density fluctuations in Erica arborea on Elba (Italy)

Erica arborea (L) is a widespread Mediterranean species, able to cope with water stress and colonize semiarid environments. The eco‐physiological plasticity of this species was evaluated by studying plants growing at two sites with different soil moistures on the island of Elba (Italy), through dendrochronological, wood‐anatomical analyses and stable isotopes measurements. Intra‐annual density fluctuations (IADFs) were abundant in tree rings, and were identified as the key parameter to understand site‐specific plant responses to water stress. Our findings showed that the formation of IADFs is mainly related to the high temperature, precipitation patterns and probably to soil water availability, which differs at the selected study sites. The recorded increase in the ¹³C‐derived intrinsic water use efficiency at the IADFs level was linked to reduced water loss rather than to increasing C assimilation. The variation in vessel size and the different absolute values of δ¹⁸O among trees growing at the two study sites underlined possible differences in stomatal control of water loss and possible differences in sources of water uptake. This approach not only helped monitor seasonal environmental differences through tree‐ring width, but also added valuable information on E. arborea responses to drought and their ecological implications for Mediterranean vegetation dynamics.     

Asymmetrical effects of mesophyll conductance on fundamental photosynthetic parameters and their relationships estimated from leaf gas exchange measurements

Worldwide measurements of nearly 130 C₃ species covering all major plant functional types are analysed in conjunction with model simulations to determine the effects of mesophyll conductance (g_m) on photosynthetic parameters and their relationships estimated from A/C_i curves. We find that an assumption of infinite g_m results in up to 75% underestimation for maximum carboxylation rate V_cmax, 60% for maximum electron transport rate J_max, and 40% for triose phosphate utilization rate T_u. V_cmax is most sensitive, J_max is less sensitive, and T_u has the least sensitivity to the variation of g_m. Because of this asymmetrical effect of g_m, the ratios of J_max to V_cmax, T_u to V_cmax and T_u to J_max are all overestimated. An infinite g_m assumption also limits the freedom of variation of estimated parameters and artificially constrains parameter relationships to stronger shapes. These findings suggest the importance of quantifying g_m for understanding in situ photosynthetic machinery functioning. We show that a nonzero resistance to CO₂ movement in chloroplasts has small effects on estimated parameters. A non‐linear function with g_m as input is developed to convert the parameters estimated under an assumption of infinite g_m to proper values. This function will facilitate g_m representation in global carbon cycle models.     

Effects of the geomorphometric characteristics of the local terrain on floristic composition in the central Brazilian Amazon

The objective of this study was to identify the effects of local geomorphometry on the abundance, richness and floristic composition of tree species in the central Brazilian Amazon. Forty‐six 0.25‐ha plots in different phyto‐ecologic sites were sampled, and their trees were inventoried. Geomorphometric data (elevation, slope, aspect, plan and profile curvatures) were derived from Shuttle Radar Topography Mission data. A detrended correspondence analysis (DCA) was used to examine the floristic distribution patterns among plots. In addition, geomorphometric variables were submitted to multiple regression analysis to identify the variables influencing floristic composition (represented by the first DCA component), abundance and species richness. Correlation analyses between the number of individuals from each species and the first DCA component were performed to evaluate the contribution of each species. Analysis of the results could not confirm an effect of geomorphometry alone on species richness and abundance, although floristic composition was significantly influenced by profile curvature and elevation. Despite the relatively low variation in altitude at the study site, species were found to be sensitive to terrain peculiarities such as elevation and profile curvature, which can constrain particular ecologic niches and contribute to the spatial distribution patterns of species.     

Fatty acid composition of consumers in boreal lakes – variation across species,space and time

1. Fatty acids (FAs) have been widely applied as trophic biomarkers in aquatic food web studies. However, current knowledge of inter‐ and intraspecific variation in consumer FA compositions across spatial and temporal scales is constrained to a few pelagic taxa. 2. We analysed the FAs of 22 taxa of benthic macroinvertebrates, zooplankton and fish collected from the littoral, pelagic and profundal habitats of nine boreal oligotrophic lakes over spring, summer and autumn. We quantified and compared the FA variance partitions contributed by species identity (i.e. an integrative effect of phylogenetic origin, life history and functional feeding guild of individual taxa), site and season using partial redundancy analysis both on all consumers and on benthic arthropods alone. 3. Species identity alone contributed 84.4 and 72.8% of explained FA variation of all consumers and benthic arthropods, respectively. Influences of site, season and all joint effects accounted for 0–11.3% only. Fatty acid profiles of primary consumers differentiated below class level, but those of predators were distinguishable only when they became more taxonomically distinct (i.e. among classes or higher). 4. Pelagic and profundal consumers showed stronger reliance on autochthonous resources than did their littoral counterparts as reflected by their higher ω3 to ω6 FA ratios. Polyunsaturated FAs (PUFAs) were increasingly retained with trophic levels, and saturated FAs (e.g. FA 16 : 0) gradually reduced. Ecologically, this trade‐off enhances the trophic transfer efficiency and confirms the importance of PUFA‐rich autotrophs in aquatic food webs. 5. Our findings indicate strong interspecific differences in FA requirements and assimilation among aquatic consumers from a wide range of taxonomic levels, habitats and lakes. Consumers were able to maintain homoeostasis in FA compositions across spatial and temporal changes in resource FAs, but consumer homoeostasis did not limit the effectiveness of FAs as trophic biomarkers.     

Historical isolation and Quaternary range expansion of divergent lineages in wild grapevine

Vitis vinifera subsp. silvestris, the wild subspecies of Vitis vinifera L., is a unique and valuable genetic resource for cultivated grapevines. At present, this wild form is rare and is spread from the Southern Atlantic coast of Europe to the Western Himalayas. In the present study, six nuclear microsatellite DNAs were analysed in 301 wild grape samples, using factorial correspondence analysis and the Bayesian model. The aim was to detect the distribution of genetic variability and admixture proportions and thus to identify the main routes of recolonization after the quaternary glaciation, as well as signals of secondary contacts in Europe. The results obtained show that some Caucasus and Italian areas played key roles as refugial areas. Moreover, the data suggest the existence of two main migration routes through central Europe during the post‐glacial or the inter‐glacial periods. The first started from Southern Italy and moved northward, whereas the second originated from refugia possibly located in eastern areas and migrated westwards. This scenario is most likely associated with the population expansion that followed the European Quaternary glaciations. In accordance with this assumption, central Europe is proposed as an admixture confluence of migration routes radiating from separate grapevine refugia. © 2008 The Linnean Society of London, Biological Journal of the Linnean Society, 2008, 95 , 611–619.     

Biogeographic distribution of the Phytoseiidae (Acari: Mesostigmata)

More than 1982 species in 90 genera were included in an analysis of the biogeography of the Phytoseiidae, a family of predatory mites. Seven biogeographic regions were taken into account: Nearctic, Neotropical, Ethiopian, West Palaearctic, East Palaearctic, Oriental, and Australasian. The number of species was particularly high in the Neotropical, Oriental, and West Palaearctic regions. These regions also present the highest levels of species endemism. The number of genera was quite similar in all regions except for the Neotropics, which also had a high level of endemism. The possible Gondwanian (Neotropical, Ethiopian, Australasian, and Oriental regions) origin of the Phytoseiidae, most probably in the Neotropics, and their possible radiation to Laurasia (Nearctic, West Palaearctic, and East Palaearctic regions) are discussed. The comparison between genera and species in the different biogeographic regions indicate the importance of both dispersal and vicariance events in the evolution of the group. Dispersal is assumed to have been most important between Neotropical and Nearctic regions and between East Palaearctic and Oriental regions, whereas vicariance could have been the dominating process between Australasian, Ethiopian, and Oriental regions, as well as between West and East Palaearctic regions. A parsimony analysis of endemicity showed the Neotropical and the Nearctic regions to be isolated from the other regions. This is certainly due to a diversification after the continents drifted apart and then a high dispersal between Nearctic and Neotropical regions. Different phylogenetic hypotheses and scenarios are proposed for each subfamily based on the results obtained and further investigations are proposed.  © 2008 The Linnean Society of London, Biological Journal of the Linnean Society , 2008, 93 , 845–856.     

Homalodontus nom. nov., a replacement name for Wapitiodus Mutter,de Blanger and Neuman, 2007 (Homalodontidae nom. nov., ?Hybodontoidea), preoccupied by Wapitiodus Orchard, 2005

The replacement names Homalodontus nom. nov. ( Homalodontidae nom. nov. ) are proposed for the Early Triassic shark Wapitiodus Mutter et al., 2007 (Wapitiodidae Mutter et al., 2007), preoccupied by the Triassic conodont Wapitiodus Orchard, 2005 (Gondolellidea Lindström, 1970 ). © 2008 The Linnean Society of London, Zoological Journal of the Linnean Society, 2008, 154 , 419–420.