Time-dependent cross ratio estimation for bivariate failure times

In the analysis of bivariate correlated failure time data, it is important to measure the strength of association among the correlated failure times. One commonly used measure is the cross ratio. Motivated by Cox's partial likelihood idea, we propose a novel parametric cross ratio estimator that is a flexible continuous function of both components of the bivariate survival times. We show that the proposed estimator is consistent and asymptotically normal. Its finite sample performance is examined using simulation studies, and it is applied to the Australian twin data.     

Relationships between musk extraction, social rank and tail-rubbing in male Alpine musk deer, Moschus sifanicus

Musk deer (Moschus spp.) are small, solitary forest ruminants well-known for the musk secreted by adult males. Because of illegal hunting and habitat degradation and loss, the five species of musk deer are classified as endangered. Musk deer farming has been a positive example of ex situ conservation, maintaining deer numbers whilst sustaining musk production. This study was conducted at the Xinglongshan Musk Deer Farm in Gansu Province in northwest China, and was designed to explore the relationships among musk extraction, fighting ability and social rank in captive, male alpine musk deer (Moschus sifanicus). Results showed that musk production was related to a male’s rank in the dominance hierarchy. Males in the middle rank of the dominance hierarchy tended to produce more musk than deer of higher and lower ranks. This is due to the time-energy budgeting patterns and captive stress of males with different status in the dominance hierarchy. That is, high-ranking males need to budget more time and energy to maintain their higher rank, while low-ranking males are exposed to more aggression from higher-ranking individuals, thus limiting their access to resources such as food and shelter. Accordingly, high-ranking and low-ranking males endured more stress than middle-ranking males, negatively affecting their annual musk production. Supporting the correlation between musk production and the frequency of tail-rubbing behavior was not significant, average musk extraction could not be predicted based on the frequency of tail-rubbing alone. Status in the dominance hierarchy, however, was positively correlated with tail-rubbing frequency, with males of higher rank tending to tail-rub more frequently. Conflict winners tended to initiate tail-rubbing after the conflict; tail-rubbing accounted for 83.33% of the post-conflict behavior expressed by the winner. Tail-rubbing was one of the behavioral rewards of winning a conflict and was also related to releasing aggression; not solely for scent marking territory and trails. Based on the results of this study, there was no direct relationship between musk production and captive males’ status in the dominance hierarchy (and, therefore, in the intensity of aggression displayed). If the sole aim of musk deer farms is to domesticate musk deer for maximum production of musk, we suggest that highly aggressive males be removed from the population. Musk production will remain unchanged, however, aggression level and intensity of fighting could be lessened thus reducing farming costs.     

易与花斑糠疹混淆的融合性网状乳头瘤病合并黑棘皮病1例

融合性网状乳头瘤病为一种少见的原因不明的皮肤病,不易诊断。多见于青少年,好发于躯干部和腋窝,为褐色鳞屑性斑片或斑块。临床易误诊而被延误治疗。报告1例融合性网状乳头瘤病合并黑棘皮病,曾被多次拟诊为花斑糠疹,有较典型的临床表现和组织病理改变。口服及外用异维A酸治疗有效。     

反式作用干扰小RNA

反式作用干扰小RNA（trans—acting siRNA,tasiRNA）是植物中一类内源性siRNA,其成熟过程由miRNA所介导,而且不产生扩增效应。     

An extracellular domain of the accessory β1 subunit is required for modulating BK channel voltage sensor and gate

A family of tissue-specific auxiliary β subunits modulates large conductance voltage- and calcium-activated potassium (BK) channel gating properties to suit their diverse functions. Paradoxically, β subunits both promote BK channel activation through a stabilization of voltage sensor activation and reduce BK channel openings through an increased energetic barrier of the closed-to-open transition. The molecular determinants underlying β subunit function, including the dual gating effects, remain unknown. In this study, we report the first identification of a β1 functional domain consisting of Y74, S104, Y105, and I106 residues located in the extracellular loop of β1. These amino acids reside within two regions of highest conservation among related β1, β2, and β4 subunits. Analysis in the context of the Horrigan-Aldrich gating model revealed that this domain functions to both promote voltage sensor activation and also reduce intrinsic gating. Free energy calculations suggest that the dual effects of the β1 Y74 and S104-I106 domains can be largely accounted for by a relative destabilization of channels in open states that have few voltage sensors activated. These results suggest a unique and novel mechanism for β subunit modulation of voltage-gated potassium channels wherein interactions between extracellular β subunit residues with the external portions of the gate and voltage sensor regulate channel opening.     

Formation of soil organic carbon pool is regulated by the structure of dissolved organic matter and microbial carbon pump efficacy: A decadal study comparing different carbon management strategies

To achieve long-term increases in soil organic carbon (SOC) storage, it is essential to understand the effects of carbon management strategies on SOC formation pathways, particularly through changes in microbial necromass carbon (MNC) and dissolved organic carbon (DOC). Using a 14-year field study, we demonstrate that both biochar and maize straw lifted the SOC ceiling, but through different pathways. Biochar, while raising SOC and DOC content, decreased substrate degradability by increasing carbon aromaticity. This resulted in suppressed microbial abundance and enzyme activity, which lowered soil respiration, weakened in vivo turnover and ex vivo modification for MNC production (i.e., low microbial carbon pump “efficacy”), and led to lower efficiency in decomposing MNC, ultimately resulting in the net accumulation of SOC and MNC. In contrast, straw incorporation increased the content and decreased the aromaticity of SOC and DOC. The enhanced SOC degradability and soil nutrient content, such as total nitrogen and total phosphorous, stimulated the microbial population and activity, thereby boosting soil respiration and enhancing microbial carbon pump “efficacy” for MNC production. The total C added to biochar and straw plots were estimated as 27.3–54.5 and 41.4 Mg C ha⁻¹, respectively. Our results demonstrated that biochar was more efficient in lifting the SOC stock via exogenous stable carbon input and MNC stabilization, although the latter showed low “efficacy”. Meanwhile, straw incorporation significantly promoted net MNC accumulation but also stimulated SOC mineralization, resulting in a smaller increase in SOC content (by 50%) compared to biochar (by 53%–102%). The results address the decadal-scale effects of biochar and straw application on the formation of the stable organic carbon pool in soil, and understanding the causal mechanisms can allow field practices to maximize SOC content.     

Asymmetric reduction of prochiral ketones to chiral alcohols catalyzed by plants tissue

As an important organic compound, chiral alcohols are the key chiral building blocks to many single enantiomer pharmaceuticals. Asymmetric reduction of the corresponding prochiral ketones to produce the chiral alcohols by biocatalysis is one of the most promising routes. Asymmetric reduction of different kinds of non-natural prochiral ketones catalyzed by various plants tissue was studied in this work. Acetophenone, 4'-chloroacetophenone and ethyl 4-chloroacetoacetate were chosen as the model substrates for simple ketone, halogen-containing aromatic ketone and beta-ketoesters, respectively. Apple (Malus pumila), carrot (Daucus carota), cucumber (Cucumis sativus), onion (Allium cepa), potato (Soanum tuberosum), radish (Raphanus sativus) and sweet potato (Ipomoea batatas) were chosen as the biocatalysts. It was found that these kinds of prochiral ketoness could be reduced by these plants tissue with high enantioselectivity. Both R- and S-form configuration chiral alcohols could be obtained. The e.e. and chemical yield could reach about 98 and 80% respectively for acetophenone and 4'-chloroacetophenone reduction reaction with favorable plant tissue. And the e.e. and yield for ethyl 4-chloroacetoacetate reduction reaction was about 91 and 45% respectively.