The effect of 50 years of landscape change on species richness and community composition

We analysed a 50-year dataset of avian species observations to determine how richness and community composition varied over a period of landscape-scale environmental change. Our study area, northern lower Michigan, has experienced substantial land-use and land-cover change over time. Like much of the northern Midwest, it has shifted from a largely unpopulated, post-logging shrubland to a moderately populated closed-canopy forest. Such changes are generally expected to influence overall richness and community composition. We found that regional richness per year remained virtually unchanged over the study period. Year-to-year variation in species number was surprisingly low. Richness totals included vastly different species groups as the composition of the regional bird community changed substantially over time. Changes in the types of species present appear to reflect deterministic changes in habitat. The number of grassland and open-habitat species decreased, for example, while species associated with older forests and urban habitats increased. Our results suggest that habitat changes at the landscape scale do not necessarily lead to changes in the number of species a region can support. Such changes, however, do appear to influence the types of species that will occupy a region, and can lead to substantial changes in community composition.     

Staphylococcus aureus Protoplasting Induced by d-Cycloserine

Addition of sublethal doses of d-cycloserine to growing cells of Staphylococcus aureus induces the rupture of the cell wall along an equatorial ring, thus allowing the liberation of protoplasts.     

Evidence against a Role of Elevated Intracellular Ca2+ during Plasmodium falciparum Preinvasion

Severe malaria is primarily caused by Plasmodium falciparum parasites during their asexual reproduction cycle within red blood cells. One of the least understood stages in this cycle is the brief preinvasion period during which merozoite-red cell contacts lead to apical alignment of the merozoite in readiness for penetration, a stage of major relevance in the control of invasion efficiency. Red blood cell deformations associated with this process were suggested to be active plasma membrane responses mediated by transients of elevated intracellular calcium. Few studies have addressed this hypothesis because of technical challenges, and the results remained inconclusive. Here, Fluo-4 was used as a fluorescent calcium indicator with optimized protocols to investigate the distribution of the dye in red blood cell populations used as P. falciparum invasion targets in egress-invasion assays. Preinvasion dynamics was observed simultaneously under bright-field and fluorescence microscopy by recording egress-invasion events. All the egress-invasion sequences showed red blood cell deformations of varied intensities during the preinvasion period and the echinocytic changes that follow during invasion. Intraerythrocytic calcium signals were absent throughout this interval in over half the records and totally absent during the preinvasion period, regardless of deformation strength. When present, calcium signals were of a punctate modality, initiated within merozoites already poised for invasion. These results argue against a role of elevated intracellular calcium during the preinvasion stage. We suggest an alternative mechanism of merozoite-induced preinvasion deformations based on passive red cell responses to transient agonist-receptor interactions associated with the formation of adhesive coat filaments.     

Identification of potential recruitment bottlenecks in larval stages of the giant fan mussel <Emphasis Type="Italic">Pinna nobilis</Emphasis> using specific quantitative PCR

The largest semi-enclosed basin in the world, the Mediterranean Sea, is characterized by high biodiversity and heavy human pressure on the coastal system. The Strait of Sicily (SoS) represents the boundary between western and eastern Mediterranean sub-regions and is an important biodiversity hot spot. Given its ecotonal nature and it being a “crossroad” for the westward expansion of warm-temperate and tropical species from the Levantin basin, the SoS is likely to play a key role in future climate change related biodiversity changes within the Mediterranean. The complexity of the SoS ecosystem, characterized by wider shallow detritic and rocky banks on the continental shelf hosting large biodiverse communities, and peculiar circulation pattern, promotes species diversity and abundance. In addition, the deep-sea is characterized by the occurrence of extremely vulnerable habitats, such as deep-water communities of scleractinian corals, antipatharians, gorgonians, and red coral. We review the current knowledge on the main characteristics of the north sector of the SoS ecosystem. The SoS ecosystem is increasingly threatened by expanding anthropogenic pressures in the area and specific conservation measures should be implemented on a national and international level to protect the relevant and vulnerable habitats.     

Quantitative patterns of Hsps in tubular adenoma compared with normal and tumor tissues reveal the value of Hsp10 and Hsp60 in early diagnosis of large bowel cancer

Large bowel carcinogenesis involves accumulation of genetic alterations leading to transformation of normal mucosa into dysplasia and, lastly, adenocarcinoma. It is pertinent to elucidate the molecular changes occurring in the pre-neoplastic lesions to facilitate early diagnosis and treatment. Heat shock proteins (Hsps), many of which are molecular chaperones, are implicated in carcinogenesis, and their variations with tumor progression encourage their study as biomarkers. There are many reports on Hsps and cancer but none to our knowledge on their systematic quantification in pre-neoplastic lesions of the large bowel. We performed immunohistochemical determinations of Hsp10, Hsp60, Hsp70, and Hsp90 in biopsies of large bowel tubular adenomas with moderate grade of dysplasia and compared to normal mucosa and adenocarcinoma with a moderate grade of differentiation (G2). A significant elevation of Hsp10 and Hsp60 only, i.e., in the absence of elevation of Hsp70 or Hsp90, in both epithelium and lamina propria was found in tubular adenoma by comparison with normal mucosa. In contrast, adenocarcinoma was characterized by the highest levels of Hsp10 and Hsp60 in epithelium and lamina propria, accompanied by the highest levels of Hsp70 only in epithelium and of Hsp90 only in lamina propria, by comparison with normal and tubular adenoma counterparts. Hsp10 and Hsp60 are promising biomarkers for early diagnosis of tubular adenoma and for its differentiation from more advanced malignant lesions. Hsp10 and Hsp60 may be implicated in carcinogenesis from its very early steps and, thus, are potentially convenient targets for therapy.     

Tim/Timeless,a member of the replication fork protection complex,operates with the Warsaw breakage syndrome DNA helicase DDX11 in the same fork recovery pathway

We present evidence that Tim establishes a physical and functional interaction with DDX11, a super-family 2 iron-sulfur cluster DNA helicase genetically linked to the chromosomal instability disorder Warsaw breakage syndrome. Tim stimulates DDX11 unwinding activity on forked DNA substrates up to 10-fold and on bimolecular anti-parallel G-quadruplex DNA structures and three-stranded D-loop approximately 4–5-fold. Electrophoretic mobility shift assays revealed that Tim enhances DDX11 binding to DNA, suggesting that the observed stimulation derives from an improved ability of DDX11 to interact with the nucleic acid substrate. Surface plasmon resonance measurements indicate that DDX11 directly interacts with Tim. DNA fiber track assays with HeLa cells exposed to hydroxyurea demonstrated that Tim or DDX11 depletion significantly reduced replication fork progression compared to control cells; whereas no additive effect was observed by co-depletion of both proteins. Moreover, Tim and DDX11 are epistatic in promoting efficient resumption of stalled DNA replication forks in hydroxyurea-treated cells. This is consistent with the finding that association of the two endogenous proteins in the cell extract chromatin fraction is considerably increased following hydroxyurea exposure. Overall, our studies provide evidence that Tim and DDX11 physically and functionally interact and act in concert to preserve replication fork progression in perturbed conditions.