Bioinformatic analysis of BBTV satellite DNA in Hainan

Banana bunchy top virus (BBTV),family Nanaviridae,genus Babuvirus,is a single stranded DNA virus (ssDNA) that causes banana bunchy top disease (BBTD) in banana plants.It is the most common and most destructive of all viruses in these plants and is widespread throughout the Asia-Pacific region.In this study we isolated,cloned and sequenced a BBTV sample from Hainan Island,China.The results from sequencing and bioinformatics analysis indicate this isolate represents a satellite DNA component with 12 DNA sequences motifs.We also predicted the physical and chemical properties,structure,signal peptide,phosphorylation,secondary structure,tertiary structure and functional domains of its encoding protein,and compare them with the corresponding quantities in the replication initiation protein of BBTV DNA1.     

北京西山侏罗纪大同锥叶蕨的研究

大同锥叶蕨Coniopteris tatungensis 是侏罗纪植物群常见的分子。由于对该植物特征认识的不同, 对其在分类上的归属有不同意见,或归入膜蕨型锥叶蕨C．hymenophylloides,或归入简单锥叶蕨C. simplex。通过对产自北京西山斋堂地区窑坡组下段的标本的深入研究,特别是用扫描电子显微镜对该 标本的孢子囊群和孢子囊的观察,确认大同锥叶蕨在锥叶蕨属的种级分类上的独立性。文中还初步讨论了其分类和地理分布。     

鹤山南亚热带草坡生态系统的热量平衡

本文以广东鹤山丘陵综合试验站草坡为研究对象,分析了鹤山南亚热带草坡的能量平衡特征,主要结果如下：1．辐射平衡的各分量中,蒸发散耗热占净辐射的74.7％,其年变化幅度较大;湍流热通量占净辐射的21．2％,其月变化没有明显的规律,波动较大,土壤热通量与其它分量相比,其比重要小得多。2．虽然鹤山年幅射量和降雨量较多,但水热条件有几个月配合欠佳,使得草坡的净辐射能有90％以上用于地面以上植被和空气湍流交换所消耗,小气候条件较差,影响了这一生态系统的生产潜力的发挥。3．太阳辐射透过大气层以后,仅有4775．2MJm-2a-1左右的辐射能到达草坡,草坡反射了822．5MJm-2a-1,其净幅射收人为2915．6MJm-2a-1,净辐射收人中又有2077．8MJm-2a-1用于蒸散作用,618.1MJm-2a-1用于湍流热交换,87．5MJm-2a-1用于土壤热交换,植被贮热约38.8MJm-2a-1;用于净光合作用耗热93．4MJm-2a-1。     

1988-2013年重庆市主城九区生态用地空间结构及其生态系统服务价值变化

在当前快速城市化的背景下,理解和把握城市生态系统服务功能退化原因及规律的最有效手段是对其生态用地结构及其生态系统服务价值进行准确的评估。采用RS、GIS技术以及生态系统服务价值评估等方法,对重庆市主城九区1988、1996、2004、2013年4个时段遥感影像进行解译及比较分析,结果表明：1988-2013年间,重庆市主城九区城市化水平经历了加速阶段、减速阶段及饱和阶段,城市化水平的提高对城市建设用地增长的影响显著;重庆市主城九区生态用地主要为城市提供了食物生产、提供原材料、废物处理、土壤形成与保护、气候调节、气体调节、生物多样性以及水源涵养等生态系统服务,在结构变化上呈现出“二减三增”的结构变化特点;25年间重庆市主城九区共减少生态系统服务价值260.60×10⁶元,整体处于下降趋势,其中农地的生态系统服务价值损失最大,共减少24.50%;在空间分布上,随着城市建设用地向“南-北-西”方向扩展,生态系统服务价值以中梁山与铜锣山之间的区域减少最为严重,整个研究区生态系统服务价值下降的主要原因来自于农地的大量减少以及城市建设用地扩张所带来的生态负影响。研究结果表明在重庆市主城九区生态用地空间格局与生态系统服务变化之间存在密切相关性,在城市化率达到饱和阶段后应严格控制建设用地增长,促进建设用地集约节约利用,加大农地的保护力度以及对林地、水体、草地的维护,维持整个区域的生态平衡。研究可为科学合理布局和保护城市生态用地提供信息资料和决策参考。     

ELISA检测抗-HIV室内质控血清的制备和应用

为了提高抗-HIV的检测质量,进行室内质控以鉴别诊断试剂的质量和控制操作误差,试制了抗-HIV室内质控血清,收集抗-HIV诊断试剂盒中阳性对照血清,采用不同品牌、不同批号的诊断试剂检测后,稀释、分装成低值弱阳性,即为室内质控血清,将质控血清放不同温度下保存,考核其稳定性和精密性,并应用于两厂家各3批试剂的检测,结果试制的室内质控血清在-20℃条件下存放5个月,在4℃条件下存放29天稳定性良好,检测结果稳定,该质控血清适宜作抗-HIV检测室内质控使用。     

Genetics of 51d-52a, a Region Containing Several Maternal-Effect Genes and Two Maternal-Specific Transcripts in Drosophila

Two genomic clones exhibiting a maternal-specific pattern of expression map to cytological region 52A. To elucidate the function of these clones we have undertaken a mutagenesis of the cytological region 51D-52A. This paper presents the results of this screen and the preliminary analysis of female-sterile and lethal mutations isolated. A total of twelve complementation groups have been identified, four of which are defined exclusively by female-sterile alleles. Only one visible mutation was isolated, a recessive temperature-sensitive allele of Thickened-arista (Tarts). Several of the seven lethal loci display an embryonic lethal phase. Three of the four female-sterile loci affect chorion structure with one resulting in underamplification of the chorion genes, and two (possibly three) of the four female-steriles affect nuclear division/DNA replication. Thus it appears that this is a "developmentally important" region, possibly representing a clustering of genes involved in either DNA replication or nuclear division.     

Development of mechanistically based model for simulating soluble microbial products generation in an aerated/non-aerated SBR

Soluble microbial products (SMPs) are considered as the main organic components in wastewater treatment plant effluent from biological wastewater treatment systems. To investigate and explore SMP metabolism pathway for further treatment and control, two innovative mechanistically based activated sludge models were developed by extension of activated sludge model no.3 (ASM3). One was the model by combining SMP formation and degradation (ASM3-SMP model) processes with ASM3, and the other by combining both SMP and simultaneous substrate storage and growth (SSSG) mechanisms with ASM3 (SSSG-ASM3-SMP model). The detailed schematic modification and process supplements were introduced for comprehensively understanding all the mechanisms involved in the activated sludge process. The evaluations of these two models were demonstrated by a laboratory-scale sequencing batch reactor (SBR) operated under aerated/non-aerated conditions. The simulated and measured results indicated that SMP comprised about 83% of total soluble chemical oxygen demand (SCOD) in which biomass-associated products (BAPs) were predominant compared with utilization-associated products (UAPs). It also elucidated that there should be a minimum SMP value as the reactive time increases continuously and this conclusion could be used to optimize effluent SCOD in activated sludge processes. The comparative results among ASM3, ASM3-SMP and SSSG-ASM3-SMP models and the experimental measurements (SCOD, ammonia and nitrate nitrogen) showed clearly the best agreement with SSSG-ASM3-SMP simulation values (R = 0.993), strongly suggesting that both SMP formation and degradation and SSSG mechanisms are necessary in biologically activated sludge modeling for municipal wastewater treatment.     

An improved particle bombardment for the generation of transgenic plants by direct immobilization of relleasable Tn5 transposases onto gold particles

We have developed a modified particle bombardment method for plant transgenesis. An intein-tag and a 6×Cys-tag were successively fused to the N-terminus of a hyperactive Tn5 transposase. The modified transposase was immobilized on bare gold microscopic particles via covalent binding of a 6×Cys-tag sulfydryl groups to the gold surface. The tethered transposase can bind the transposon DNA in vitro to form the transposome in the absence of Mg2? ions. After bombardment of the gold particles carrying the transposomes into the plant cells, the transposomes will be released from the carrier due to the activated self-cleavage function of intein-tag. Our data showed this procedure integrated foreign DNA into the plant genome with an increased transformation frequency as compared to the conventional particle bombardment method. A single copy insertion can also be obtained by decreasing of the assembled transposon DNA amount in relation to plant cell biomass.