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121.
Marie JJ Huysman Cindy Martens Klaas Vandepoele Jeroen Gillard Edda Rayko Marc Heijde Chris Bowler Dirk Inzé Van de Yves Peer Lieven De Veylder Wim Vyverman 《Genome biology》2010,11(2):1-19
Background
Despite the enormous importance of diatoms in aquatic ecosystems and their broad industrial potential, little is known about their life cycle control. Diatoms typically inhabit rapidly changing and unstable environments, suggesting that cell cycle regulation in diatoms must have evolved to adequately integrate various environmental signals. The recent genome sequencing of Thalassiosira pseudonana and Phaeodactylum tricornutum allows us to explore the molecular conservation of cell cycle regulation in diatoms.Results
By profile-based annotation of cell cycle genes, counterparts of conserved as well as new regulators were identified in T. pseudonana and P. tricornutum. In particular, the cyclin gene family was found to be expanded extensively compared to that of other eukaryotes and a novel type of cyclins was discovered, the diatom-specific cyclins. We established a synchronization method for P. tricornutum that enabled assignment of the different annotated genes to specific cell cycle phase transitions. The diatom-specific cyclins are predominantly expressed at the G1-to-S transition and some respond to phosphate availability, hinting at a role in connecting cell division to environmental stimuli.Conclusion
The discovery of highly conserved and new cell cycle regulators suggests the evolution of unique control mechanisms for diatom cell division, probably contributing to their ability to adapt and survive under highly fluctuating environmental conditions. 相似文献122.
Clifford DL Folmes Grzegorz Sawicki Virgilio JJ Cadete Grant Masson Amy J Barr Gary D Lopaschuk 《Proteome science》2010,8(1):38
Background
During and following myocardial ischemia, glucose oxidation rates are low and fatty acids dominate as a source of oxidative metabolism. This metabolic phenotype is associated with contractile dysfunction during reperfusion. To determine the mechanism of this reliance on fatty acid oxidation as a source of ATP generation, a functional proteomics approach was utilized. 相似文献123.
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The development and application of a flexible process controller in fed‐batch yeast fermentations using pO2 cascade control was performed. A new algorithm for fed‐batch fermentations using pO2 cascade control was developed, the concept of which could be used as a realizable solution in fermentation systems equipped according to the basic configuration. The algorithm is based on the combined influence of pO2 and pH on the substrate feeding intensity. To test and develop this algorithm, Saccharomyces cerevisiae DY 7221 and Candida tropicalis CK‐4 fermentations were carried out. As a result of the use of the combined algorithm, the specific growth rate and productivity grew in both fermentations. In this case, the effect of the use of the algorithm was most pronounced in the C. tropicalis fermentation. 相似文献
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Differences in specificity and catalytic efficiency between allozymes of esterase-4 from Drosophila mojavensis 总被引:1,自引:0,他引:1
A more than 10-fold difference in the specificity and catalytic efficiency
for 1-naphthyl esters was measured between two allozymes of esterase-4 from
Drosophila mojavensis. This difference is mainly caused by a difference in
the affinity for the 1-naphthyl esters. The amino acid compositions of the
allozymes are not significantly different, which means that the difference
in primary structure is small. Small differences in primary structure
generally do not result in such a large increase in catalytic efficiency
and such a large shift in substrate specificity as was found in the present
study.
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