Experimentally determined sequence requirement of ACGT-containing abscisic acid response element

The sequence requirement of the ACGT-containing abscisic acid response element (ABRE) was analyzed by systematically substituting the bases surrounding the ACGT-core of motif A, the principal ABRE of the rice gene, OSEM: This was done within the context of a 55-bp promoter fragment that minimally confers ABA-responsiveness to a heterologous promoter. Based on this analysis, the sequence requirement of the ACGT-containing ABRE was determined as ACGTG G/T C, which matched very well with the consensus derived from sequence comparison of ABA-responsive promoters.     

BRU1 Maintains Configuration of the Euchromatic Subchromosomal Domain in the Nucleus of Arabidopsis

Chromatin states are inseparably associated with regulation of genes. In yeast and animals, chromatin states also correlate with the configuration and spatial localization pattern of chromosomal domains in the nucleus. In plants, however, the dynamics of such domains associated with gene regulation is poorly understood except for heterochromatic domains. We have previously reported several euchromatic regions of Arabidopsis chromosomes where genes are preferentially upregulated by a defect in BRU1—a nuclear factor involved in DNA damage responses and epigenetic gene regulation. In this study, we present a cytogenetic characterization of one of these subchromosomal regions, SCR1. In nuclei of wild-type leaf cells, the 174-kb SCR1 region was moderately condensed near nucleolus organizing region 4 (NOR4). In bru1 mutants, the confined localization pattern of SCR1 was stochastically disrupted. In contrast, bru1 defects did not affect the localization patterns of NOR4 and another 149-kb euchromatic region in which gene activity was not altered in bru1. The degree of confinement of SCR1 in the nucleus varied between leaves, hypocotyls, and undifferentiated calli, but not drastically. These results suggest that BRU1 plays a role in maintaining the configuration of a euchromatic subchromosomal domain that is a potential determinant in the control of gene activity.     

Differential activation of the rice sucrose nonfermenting1-related protein kinase2 family by hyperosmotic stress and abscisic acid

To date, a large number of sequences of protein kinases that belong to the sucrose nonfermenting1-related protein kinase2 (SnRK2) family are found in databases. However, only limited numbers of the family members have been characterized and implicated in abscisic acid (ABA) and hyperosmotic stress signaling. We identified 10 SnRK2 protein kinases encoded by the rice (Oryza sativa) genome. Each of the 10 members was expressed in cultured cell protoplasts, and its regulation was analyzed. Here, we demonstrate that all family members are activated by hyperosmotic stress and that three of them are also activated by ABA. Surprisingly, there were no members that were activated only by ABA. The activation was found to be regulated via phosphorylation. In addition to the functional distinction with respect to ABA regulation, dependence of activation on the hyperosmotic strength was different among the members. We show that the relatively diverged C-terminal domain is mainly responsible for this functional distinction, although the kinase domain also contributes to these differences. The results indicated that the SnRK2 protein kinase family has evolved specifically for hyperosmotic stress signaling and that individual members have acquired distinct regulatory properties, including ABA responsiveness by modifying the C-terminal domain.     

Induction of Phenylalanine Ammonia-Lyase Activation and Isoflavone Glucoside Accumulation in Suspension-Cultured Cells of Red Bean, Vigna angularis, by Phytoalexin Elicitors, Vanadate, and Elevation of Medium pH

Treatment of suspension-cultured cells of red bean, Vigna angularis,with nigeran resulted in an accumulation of isoflavone glucosides,such as daidzein 7-O-ß-D-glucoside, daidzein 7,4'-di-O-ß-D-glucoside,and 2'-hydroxydaidzein 7,4'-di-O-ß-D-glucoside, whichwas accompanied by a transient increase in the activity of phenylalanineanimonia-lyase (PAL). Similar effects were also seen with otherphytoalexin elicitors, such as RNase A and cell wall componentsof Phytophthora megasperma var. sojae. Interestingly, the accumulation of isoflavone glucosides andthe transient increase in PAL activity were induced also byvanadate, a specific inhibitor of plasma membrane adenosinetriphosphatase. K₃PO₄ showed similar effects, but this was ascribedto the elevation of medium pH caused by adding this basic salt.In fact, merely raising the pH of the medium was found to besufficient for the induction of PAL activity. Experiments usinginhibitors showed that the induction depends on RNA and proteinsyntheses. The results are discussed in relation to the possiblemechanism of action of phytoalexin elicitors. ¹ Present address: Laboratory of Biochemistry, Faculty of Agriculture,Nagoya University, Furocho, Chikusa, Nagoya 464, Japan.     

Molecular cloning and nucleotide sequence of cDNA for sporamin,the major soluble protein of sweet potato tuberous roots

Summary Sporamin accounts for more than 80% of the total soluble proteins of tuberous roots of sweet potato, but very little, if any, in other tissues of the same plant. In vitro translation of RNA fractions from the tuberous roots in wheat germ extract and subsequent immunoprecipitation with the antibody to sporamin indicated that this protein is synthesized by membrane-bound polysomes as a precursor 4 000 daltons larger than the mature protein. A cDNA expression library was constructed from the total poly(A)⁺ RNA from the tuberous roots by a vector-primer method, and an essentially full-length cDNA clone for the sporamin mRNA was selected by direct immunological screening of the colonies. Northern blot analysis showed that sporamin mRNA is approximately 950 nucleotides in length and is specifically present in tuberous roots and very little, if any, in leaves, petioles and non-tuberous roots. Nucleotide sequence of the cDNA predicts a 37 amino acid extension in the precursor at the amino-terminus of the mature protein.     

Different Sets of cis-Elements Contribute to the Expression of a Catalase Gene from Castor Bean during Seed Formation and Postembryonic Development in Transgenic Tobacco

Deletion analysis of the promoter region of a gene for catalase,cat2, from castor bean (Ricinus communis) was performed to identifythe cis-regulatory elements responsible for the expression ofa rß-glucuronidase (GUS) fusion gene during seed formationand postembryonic development in transgenic tobacco. The analysisshowed that multiple cis-elements contribute to the activityof the cat2 promoter during seed formation and postembryonicdevelopment. The 5'-upstream regions from –1,241 to –816bp, from –720 to –682 bp, and from –632 to–535 bp, relative to the site of initiation of translationof cat2, contributed positively to the activity of the cat2promoter during both stages. By contrast, the region from –816to –720 bp had a negative effect at both stages. The regionfrom –682 to –632 bp contributed positively to theactivity during seed formation but negatively during postembyonicdevelopment. Histochemical analysis revealed that the multiplecis-elements determined not only the level of expression ofthe chimeric gene but also the tissue-specificity of such expression.For example, the region from –1,241 to –816 bp allowedexpression of the chimeric gene in the axis of the embryo ofthe dry seed, as well as in the cortex of the middle part ofthe hypocotyl and at the base of epicotyl in the young seedling. ¹Present address: Department of Plant Molecular and Cell Biology,University of Florida, Gainesville, Florida 32611-0511, U.S.A. ²Present address: Center for Molecular Biology and Genetics,Mie University, 1515 Kamihama, Tsu, Mie, 519 Japan ³Present address: Faculty of Biotechnology, Fukui PrefecturalUniversity, 4-1-1 Kenjojima, Matsuoka-cho, Yoshida-gun, Fukui,910-11 Japan     

Mechanism of the Increase in Succinate Dehydrogenase Activity in Wounded Sweet Potato Root Tissue

The large subunit (mol wt: 65,000) of sweet potato succinatedehydrogenase was isolated by SDS-polyacrylamide gel electrophoresisof a succinate dehydrogenase preparation, which had been partiallypurified from root mitochondria by solubilizing the enzyme withEmulgen 810, DEAE-cellulose column chromatography, and polyacrylamidegel electrophoresis. Antibody to the purified large subunitwas produced in a rabbit, and the antiserum obtained was judgedto be specific to the large subunit based on the results ofdouble immunodiffusion tests and immunoelectrophoresis. Rocketimmunoelectrophoresis with the antiserum showed that the increasein succinate dehydrogenase activity during the ageing of sliced,sweet potato root tissue was due to an increase in the amountof enzyme protein. Both the increases in the activity of succinatedehydrogenase and in the amount of the large subunit proteinwere inhibited by cycloheximide or chloramphenicol. We proposethat synthesis of the large subunit of succinate dehydrogenaseon cytoplasmic ribosomes is controlled by a mitochondrial translationproduct(s). ¹ This work was supported in part by a research fund from TheIshida Foundation, Nagoya, Japan. (Received November 28, 1981; Accepted February 17, 1982)