The stone age iceman from the Alps: The find and the current status of investigation

On September 19, 1991, a body protruding from glacial ice was discovered in the Alps between Austria and Italy. Considered a forensic case, and having been found on Austrian soil according to initial information, it was transported to the Department of Forensic Medicine in Innsbruck. Rumors about the body not being recent were readily confirmed, and news about the body and accompanying equipment immediately spread all over the world. The body itself was shown to be a natural mummy, as opposed to a corpse that has been embedded in glacial ice for some time, where soft tissue generally changes into grave wax (adipocere). The mummy was male and was remarkably well preserved. The preserved condition of his equipment and some organic material was astonishingly good. Isotope dating of the body by means of the ¹⁴C method has given an age of about 3,300 BC, or Late Stone Age. A survey of the border, however, revealed that the body was found just on the Italian side (within the autonomous province South Tyrol), and not as first assumed, in Austria (the province Tyrol). But according to an agreement between South Tyrol and the University of Innsbruck, the body will be kept at the Department of Anatomy in Innsbruck for a period of at least three years for research purposes. The research is to be carried out on an international basis, and the first symposium about the find was held in Innsbruck, June 3–5, 1992.     

Ultra-Deep Pyrosequencing of Partial Surface Protein Genes from Infectious Salmon Anaemia Virus (ISAV) Suggest Novel Mechanisms Involved in Transition to Virulence

Uncultivable HPR0 strains of infectious salmon anaemia viruses (ISAVs) infecting gills are non-virulent putative precursors of virulent ISAVs (vISAVs) causing systemic disease in farmed Atlantic salmon (Salmo salar). The transition to virulence involves two molecular events, a deletion in the highly polymorphic region (HPR) of the hemagglutinin-esterase (HE) gene and a Q₂₆₆→L₂₆₆ substitution or insertion next to the putative cleavage site (R₂₆₇) in the fusion protein (F). We have performed ultra-deep pyrosequencing (UDPS) of these gene regions from healthy fish positive for HPR0 virus carrying full-length HPR sampled in a screening program, and a vISAV strain from an ISA outbreak at the same farming site three weeks later, and compared the mutant spectra. As the UDPS data shows the presence of both HE genotypes at both sampling times, and the outbreak strain was unlikely to be directly related to the HPR0 strain, this is the first report of a double infection with HPR0s and vISAVs. For F amplicon reads, mutation frequencies generating L₂₆₆ codons in screening samples and Q₂₆₆ codons in outbreak samples were not higher than at any random site. We suggest quasispecies heterogeneity as well as RNA structural properties are linked to transition to virulence. More specifically, a mechanism where selected single point mutations in the full-length HPR alter the RNA structure facilitating single- or sequential deletions in this region is proposed. The data provides stronger support for the deletion hypothesis, as opposed to recombination, as the responsible mechanism for generating the sequence deletions in HE.     

Three approaches to estimate wolf Canis lupus predation rates on moose Alces alces populations

We employed three different methods to estimate predation rates on moose in a newly colonized wolf territory in Norway. In the first two methods, we estimated predation rates based on the difference in calf/cow ratios outside and inside the wolf pack territory from (1) hunter observations and (2) aerial surveys. In the last method, (3) we estimated loss of calves of radio-collared cows inside and outside the wolf pack territory. The difference in mortality rates estimated between the area subject to predation and the area outside the wolf pack territory essentially constitutes the additive component of predation. We also tested the sensitivity of violating the assumptions of methods 1 and 2 related to equal fecundity and mortality because of other factors than predation inside and outside the wolf pack territory. Predation rates varied considerably between years and methods used, with hunter observations (method 1) giving the lowest and aerial surveys (method 2) giving the highest estimates. Method 3 (radio telemetry) was the most direct assessment of predation and probably the best approach to estimate predation rates in moose. However, all three methods show the same yearly changes and may therefore be appropriate to question trends trough time or between areas.     

Highly divergent SSU rRNA genes found in the marine ciliates Myrionecta rubra and Mesodinium pulex

Myrionecta rubra and Mesodinium pulex are among the most commonly encountered planktonic ciliates in coastal marine and estuarine regions throughout the world. Despite their widespread distribution, both ciliates have received little attention by taxonomists. In order to better understand the phylogenetic position of these ciliates, we determined the SSU rRNA gene sequence from cultures of M. rubra and M. pulex. Partial sequence data were also generated from isolated cells of M. rubra from Chesapeake Bay. The M. rubra and M. pulex sequences were very divergent from all other ciliates, but shared a branch with 100% bootstrap support. Both species had numerous deletions and substitutions in their SSU rRNA gene, resulting in a long branch for the clade. This made the sequences prone to spurious phylogenetic affiliations when using simple phylogenetic methods. Maximum likelihood analysis placed M. rubra and M. pulex on the basal ciliate branch, following removal of ambiguously aligned regions. Fluorescent in situ hybridization probes were used with confocal laser scanning microscopy to confirm that these divergent sequences were both expressed in the cytoplasm and nucleolus of M. ruisra and M. pulex. We found that our sequence data matched several recently discovered unidentified eukaryotes in Genbank from diverse marine habitats, all of which had apparently been misattributed to highly divergent amoeboid organisms.     

The Developmental Basis of Quantitative Craniofacial Variation in Humans and Mice

The human skull is a complex and highly integrated structure that has long held the fascination of anthropologists and evolutionary biologists. Recent studies of the genetics of craniofacial variation reveal a very complex and multifactorial picture. These findings contrast with older ideas that posit much simpler developmental bases for variation in cranial morphology such as the growth of the brain or the growth of the chondrocranium relative to the dermatocranium. Such processes have been shown to have major effects on cranial morphology in mice. It is not known, however, whether they are relevant to explaining normal phenotypic variation in humans. To answer this question, we obtained vectors of shape change from mutant mouse models in which the developmental basis for the craniofacial phenotype is known to varying degrees, and compared these to a homologous dataset constructed from human crania obtained from a single population with a known genealogy. Our results show that the shape vectors associated with perturbations to chondrocranial growth, brain growth, and body size in mice do largely correspond to axes of covariation in humans. This finding supports the view that the developmental basis for craniofacial variation funnels down to a relatively small number of key developmental processes that are similar across mice and humans. Understanding these processes and how they influence craniofacial shape provides fundamental insights into the developmental basis for evolutionary change in the human skull as well as the developmental-genetic basis for normal phenotypic variation in craniofacial form.