A Selective Sweep on a Deleterious Mutation in CPT1A in Arctic Populations

Arctic populations live in an environment characterized by extreme cold and the absence of plant foods for much of the year and are likely to have undergone genetic adaptations to these environmental conditions in the time they have been living there. Genome-wide selection scans based on genotype data from native Siberians have previously highlighted a 3 Mb chromosome 11 region containing 79 protein-coding genes as the strongest candidates for positive selection in Northeast Siberians. However, it was not possible to determine which of the genes might be driving the selection signal. Here, using whole-genome high-coverage sequence data, we identified the most likely causative variant as a nonsynonymous G>A transition (rs80356779; c.1436C>T [p.Pro479Leu] on the reverse strand) in CPT1A, a key regulator of mitochondrial long-chain fatty-acid oxidation. Remarkably, the derived allele is associated with hypoketotic hypoglycemia and high infant mortality yet occurs at high frequency in Canadian and Greenland Inuits and was also found at 68% frequency in our Northeast Siberian sample. We provide evidence of one of the strongest selective sweeps reported in humans; this sweep has driven this variant to high frequency in circum-Arctic populations within the last 6–23 ka despite associated deleterious consequences, possibly as a result of the selective advantage it originally provided to either a high-fat diet or a cold environment.     

Utilization of 15N-labelled yeast hydrolysate in Lactococcus lactis IL1403 culture indicates co-consumption of peptide-bound and free amino acids with simultaneous efflux of free amino acids

Lactococcus lactis subsp. lactis IL1403 was grown in medium containing unlabelled free amino acids and ¹⁵N-labelled yeast hydrolysate to gain insight into the role of peptides as a source of amino acids under conditions where free amino acids are abundant. A mathematical model was composed to estimate the fluxes of free and peptide-derived amino acids into and out of the intracellular amino acid pool. We observed co-consumption of peptides and free amino acids and a considerable efflux of most free amino acids during growth. We did not observe significant differences between the peptide consumption patterns of essential and non-essential amino acids, which suggests that the incorporation of a particular amino acid is more dependent on its availability in a readily assimilated form than the organism’s auxotrophy for it. For most amino acids the contribution of peptide-bound forms to the formation of biomass was initially between 30 and 60 % with the remainder originating from free amino acids. During the later stages of fermentation we observed a decrease in the utilization of peptide-bound amino acids, thus indicating that the more readily assimilated peptides are gradually exhausted from the medium during growth.     

Accelerating effect of hydroxylamine and hydrazine on nitrogen removal rate in moving bed biofilm reactor

In biological nitrogen removal, application of the autotrophic anammox process is gaining ground worldwide. Although this field has been widely researched in last years, some aspects as the accelerating effect of putative intermediates (mainly N?H? and NH?OH) need more specific investigation. In the current study, experiments in a moving bed biofilm reactor (MBBR) and batch tests were performed to evaluate the optimum concentrations of anammox process intermediates that accelerate the autotrophic nitrogen removal and mitigate a decrease in the anammox bacteria activity using anammox (anaerobic ammonium oxidation) biomass enriched on ring-shaped biofilm carriers. Anammox biomass was previously grown on blank biofilm carriers for 450 days at moderate temperature 26.0 (±0.5) °C by using sludge reject water as seeding material. FISH analysis revealed that anammox microorganisms were located in clusters in the biofilm. With addition of 1.27 and 1.31 mg N L?1 of each NH?OH and N?H?, respectively, into the MBBR total nitrogen (TN) removal efficiency was rapidly restored after inhibitions by NO??. Various combinations of N?H?, NH?OH, NH??, and NO?? were used as batch substrates. The highest total nitrogen (TN) removal rate with the optimum N?H? concentration (4.38 mg N L?1) present in these batches was 5.43 mg N g?1 TSS h?1, whereas equimolar concentrations of N?H? and NH?OH added together showed lower TN removal rates. Intermediates could be applied in practice to contribute to the recovery of inhibition-damaged wastewater treatment facilities using anammox technology.     

Size dependent predation risk in cryptic and conspicuous insects

It is not clear which selective pressures balance the strong fecundity advantage associated with large female body size in insects. A positively size-dependent mortality risk could provide a solution. In aviary experiments with artificial larvae, we studied if larger larvae of folivorous insects are more readily found (= detectability) and/or attacked (= acceptability) by birds. As size and colouration are likely to interact in determining birds’ responses, both cryptic and conspicuous prey items were used. As detectability is likely to be context-dependent, both simple (smooth) and complex (plants) backgrounds were used in respective experiments. In the conspicuous larvae, acceptability correlated negatively with prey size. However, their detectability was context dependent, being positively correlated with size on the simple background, whereas no significant effect was found on the complex background. Surprisingly, cryptic larvae showed no correlation between detectability and size, and there was only a weak tendency for birds to attack large larvae more readily. On the basis of a quantitative model, we conclude that the effect of positively size dependent bird predation, as a single factor, is not likely to counterbalance the fecundity advantage in cryptic species, and may thus not be crucial in determining the optimum for body sizes in these insects. In conspicuous species, there is a potential for different outcomes, because detectability and acceptability affect survival in different directions. The net outcome is, therefore, likely to be highly context-dependent. Furthermore, our results provide an explanation for the recently reported absence of systematic body-size differences between cryptic and conspicuous Lepidopteran larvae: although conspicuous larvae benefit from increasing their warning signal when growing larger, they also suffer a much sharper rise in detectability. Estonian Science Foundation grant # 5746; Centre for International Mobility (Finland).     

Treatment of dairy cows with PGF2alpha or NSAID, in combination with antibiotics, in cases of postpartum uterine inflammation

ABSTRACT: BACKGROUND: The aim of the study was to test the effect of two treatments in cases of acute puerperal metritis (APM) and clinical metritis (CM). METHODS: Cows with APM and CM (n = 40)) were matched according to plasma fibrinogen levels (Fb) into three groups. Two negative control groups D (n = 11) and E (n = 17) were composed of healthy cows. The proportion of animals with APM and CM was similar within the groups. Treatment was started on the 3rd day postpartum (PP). In group A (n = 15), intramuscular (i.m.) administration of ceftiofur was used for five days in combination with flunixin for three days. Group B (n = 15) received i.m. administration of ceftiofur for five days followed by two injections of prostaglandin F2alpha, with an interval of 8 h, on the 8th day PP. Group C (n = 10) served as a control group with no treatment. The general health status, body temperature (BT) and vaginal discharge were evaluated daily. Endometrial biopsies for bacteriology were taken once a week for seven weeks PP. Blood samples for the analysis of acute phase proteins were collected once a week for six weeks PP. Samples for progesterone analysis were taken twice a week for seven weeks PP. Fertility performance data were recorded. RESULTS: The area under the curve of BT was higher in group B than in group D cows (P < 0.05). No differences were found for vaginal discharge. There were no differences in bacterial growth, start of ovarian activity or serum amyloid-A or fibrinogen levels among the groups. The haptoglobin concentration was higher in the first and second weeks PP in group B compared with the other groups (P < 0.05). The number of days open was higher in group A than in both groups B and D (P < 0.05). The pregnancy rate after the first two services was higher (P < 0.05) in groups B and D than in groups A and C. The number of services per pregnancy was lower in group B than in group C (P < 0.05). CONCLUSIONS: Regardless of more severe uterine inflammation found in animals from group B, these cows showed the same fertility parameters as healthy animals.     

Patterns of host use in solitary parasitoids (Hymenoptera, Ichneumonidae): field evidence from a homogeneous habitat

Teder, T., Tammaru, T. and Pedmanson, R. 1999. Patterns of host use in solitary parasitoids (Hymenoptera, Ichneumonidae): field evidence from a homogeneous habitat. - Ecography 22: 79-86.
We detected a significant inter- and intraspecific host preference on the level of individual host use in a system, in which three moth species (Lepidoptera: Noctuidae), feeding on a cattail Typha latifolia , are parasitized by three solitary parasitoid species (Hymenoptera: Ichneumonidae). The biology of the host species is similar but they exhibit remarkable inter- and intraspecific variance in body size. All the parasitoid species preferred the largest host species in this system whereas other host species were used only occasionally. We found that parasitoids which emerged from females of the preferred host species were larger than those which developed in males of the same species. Accordingly, two of the parasitoid species had a significant within-host-species preference: females of the largest moth species were used more often than males. No dependence of the preference pattern on host density was found. This pattern of host use is discussed in the light of the switching theory and the optimal host selection theory. Our results indicate that non-random host use by parasitoids may have significant effects on host populations and communities, and forms a potential selective factor against large body size in herbivorous insects. Unlike the majority of ichneumonid wasps, these three parasitoid species have no remarkable female-biased sexual size dimorphism, in accordance with the predictions of Charnov's sex allocation theory for this case, we did not observe any significant host quality dependent biases in sex allocation: there was no association between host sex and parasitoid sex, neither did parasitoid sex ratio differ between years with different host quality.     

Does the ‘investment principle’ model explain moulting strategies in lepidopteran larvae?

Abstract.  The aim of the present study was to evaluate the applicability of a general optimality model of insect development in the case of lepidopteran larvae. According to the model, larvae moult mainly to increase the size of mouthparts, which is assumed to limit consumption rates. The assumptions of this model being met, one should expect a dependence of growth rates on head capsule size, constancy of absolute growth rates within an instar and higher growth rates in older instars. The validity of these predictions is tested on two species of lymantriid moths. Head capsule size has only a weak effect on growth rates in one of the species, and no effect in the other. Absolute growth rates tend to increase during the development within an instar. Higher growth rates of older instar larvae are explainable by an allometric relationship that extrapolates from growth within the preceding instar. Thus, there is no evidence of an extra increase in growth performance attributable to moulting into the subsequent instar. These results support the idea that growth rates of lepidopteran larvae are limited by nutrient absorption rates rather than by the rates of consumption. There is a considerable cost of moulting in terms of lost growing time: the larvae would double their weights during an instar if they were able to develop without the premoult decrease in growth rates. The investment principle model does not appear to be directly usable to explain moulting strategies in the lepidopteran larvae studied. However, it may well be applicable after some adjustment (i.e. assuming that larvae should moult before consumption rates become limiting).     

Are peripheral populations special? Congruent patterns in two butterfly species

Populations at range margins may be genetically different from more central ones for a number of mutually non‐exclusive reasons. Specific selection pressures may operate in environments that are more marginal for the species. Genetic drift may also have a strong effect in these populations if they are small, isolated and/or have experienced significant bottlenecks during the colonisation phase. The question if peripheral populations are special, and if yes then how and why, is of obvious relevance for speciation theory, as well as for conservation biology. To evaluate the uniqueness of populations at range margins and the influence of gene flow and selection, we performed a morphometric study of two grassland butterfly species: Coenonympha arcania and C. hero (Lepidoptera: Nymphalidae). The samples were collected from Swedish populations that are peripheral and isolated from the main area of the species distributions and from populations in the Baltic states that are peripheral but connected to the main area of the species distributions. These samples were compared to those from central parts of the species distributions. The isolated populations in both species differed consistently from both peripheral and central populations in their wing size and shape. We interpret this as a result of selection caused by differences in population structure in these isolated locations, presumably favoring different dispersal propensity of these butterflies. Alternative explanations based on colonisation history, latitudinal effects, inbreeding or phenotypic plasticity appear less plausible. As a contrast, the much weaker and seemingly random among‐region differences in wing patterns are more likely to be ascribed to weaker selection pressures allowing genetic drift to be influential. In conclusion, both morphological data and results from neutral genetic markers in earlier studies of the same system provide congruent evidence of both adaptation and genetic drift in the isolated Swedish populations of both species.