浙江省生境质量时空演变与生态红线评估

生境质量是反映生物多样性状况与局地生态功能的重要指标,在高质量发展背景下研究区域生境质量的时空演变具有重要意义。以浙江省为研究区,基于InVEST模型、热点分析及地理探测器模型探究生境质量的时空演变与影响因素,并利用生境质量结果对浙江省生态红线开展了定量评估。结果表明:(1)2000-2015年,浙江省生境质量均值呈减速下降趋势,空间上形成了西北、西南、中东高和东北、中部低的分布格局;生境退化度呈现"中心-外围"的圈层辐射结构。(2)热点分析显示,生境质量与生境退化度在乡镇尺度上集聚特征相似、冷热点空间分布趋势相反。(3)地理探测分析发现,地形(高程、坡度)是影响浙江省生境质量的主要因素,植被因素(NPP、NDVI)的贡献度随时间推移逐渐增大;浙江省生境质量空间分异受到自然因子与社会经济因子的协同作用。(4)浙江省生态红线的生境质量整体较高且稳定,不同红线类型的生境质量存在差异;高生境质量区与生态红线的错位区域主要分布在浙西南、西北部山区,而北部、中部以及东部相对较少。基于此,对生态红线调整、区域生态功能区划提出对应的策略,以期提升浙江省生态空间管控。     

“共轭聚合物-产电菌”复合生物电极构建及其在微生物燃料电池中的应用

微生物燃料电池(Microbial fuel cell,MFC)作为一种生物电化学装置,在可再生能源生产和废水处理方面的巨大潜力已引起广泛关注。然而MFC面临输出功率低、欧姆内阻高以及启动时间长等问题,极大限制了其在实际工程中的应用。MFC中阳极是微生物附着的载体,对电子的产生及传递起着关键作用,开发优质的生物电极已发展成为改善MFC性能的有效途径。共轭聚合物具有成本低、电导率高、化学稳定性及生物相容性好等优点,利用共轭聚合物修饰生物电极结构,可以实现大比表面积、缩短电荷转移路径,从而实现高效生物电化学性能。同时,纳米级共轭聚合物包覆细菌,可以使细菌产生的电子有效地传递到电极。文中综述了最近报道的共轭聚合物在MFC中的应用,重点介绍了共轭聚合物修饰的MFC阳极,系统分析了共轭聚合物的优点及局限性,以及这些高效复合生物电极如何解决MFC应用中存在的低输出功率、高欧姆内阻及长启动时间等问题。     

马尾松幼苗根系和光合碳供应对土壤性质变化和温室气体排放的驱动作用

森林植被受全球气候变化、森林经营活动及病虫害等多种干扰,导致林地光合碳供应水平及根系输入量发生变化。在此背景下,土壤性质及土壤温室气体排放的响应及其机理是预测森林碳汇功能变化及森林可持续经营的重要依据。以2年生马尾松盆栽苗为对象,通过单株/盆和3株/盆栽植密度控制根系输入量、通过环割和截干控制光合碳向地下的供应能力,模拟森林植被干扰导致的根系输入量及光合碳供应变化对土壤理化性质、微生物群落结构及温室气体排放的影响。结果表明,苗木根系非结构性碳水化合物(TNC)含量和氮含量比单株/盆低;3株/盆的土壤速效氮含量比单株/盆低,土壤革兰氏阳性菌、厌氧菌、放线菌及丛枝菌根真菌丰富度均比单株/盆显著增加,3株/盆的土壤二氧化碳(CO₂)排放速率较高,但土壤氧化亚氮(N₂O)排放速率差异不显著。无论是单株/盆还是3株/盆,环割和截干处理后,根系生物量、根系长度及表面积均比对照显著下降;根系TNC含量显著下降。土壤和根系氮含量都有增加趋势;土壤微生物生物量碳(SMBC)含量降低,而土壤微生物生物量氮(SMBN)则提高。环割和截干后,土壤中各种微生物组成丰富度均有下降趋势,土壤CO₂排放速率显著下降,土壤N₂O排放速率则显著提高。根系输入量及光合碳供应对土壤细菌和真菌含量均有显著影响,土壤细菌含量与根系生物量、SMBC和SMBN显著正相关;土壤真菌含量与土壤温度显著负相关,与根系生物量、SMBC和SMBN显著正相关。相关分析表明,土壤CO₂排放通量与土壤温度、土壤湿度及根系生物量显著正相关,与土壤硝态氮显著负相关;土壤N₂O排放通量与土壤温度和土壤湿度显著正相关。以上研究表明,根系输入量与地上光合碳供应共同作用,改变土壤理化性质及微生物环境,进而影响土壤温室气体排放。     

Nucleolin interacts with the rabbit hemorrhagic disease virus replicase RdRp,nonstructural proteins p16 and p23, playing a role in virus replication

Rabbit hemorrhagic disease virus (RHDV) is a member of the Caliciviridae family and cannot be propagated in vitro, which has impeded the progress of investigating its replication mechanism. Construction of an RHDV replicon system has recently provided a platform for exploring RHDV replication in host cells. Here, aided by this replicon system and using two-step affinity purification, we purified the RHDV replicase and identified its associated host factors. We identified rabbit nucleolin (NCL) as a physical link, which mediating the interaction between other RNA-dependent RNA polymerase (RdRp)-related host proteins and the viral replicase RdRp. We found that the overexpression or knockdown of NCL significantly increased or severely impaired RHDV replication in RK-13 cells, respectively. NCL was identified to directly interact with RHDV RdRp, p16, and p23. Furthermore, NCL knockdown severely impaired the binding of RdRp to RdRp-related host factors. Collectively, these results indicate that the host protein NCL is essential for RHDV replication and acts as a physical link between viral replicase and host proteins.     

Inhibition of miR-21-5p suppresses high glucose-induced proliferation and angiogenesis of human retinal microvascular endothelial cells by the regulation of AKT and ERK pathways via maspin

The aim of the present study is to investigate the role of miR-21-5p in angiogenesis of human retinal microvascular endothelial cells (HRMECs). HRMECs were incubated with 5 mM glucose, 30 mM glucose or 30 mM mannitol for 24 h, 48 h or 72 h. Then, HRMECs exposed to 30 mM glucose were transfected with miR-21-5p inhibitor. We found that high glucose increased the expression of miR-21-5p, VEGF, VEGFR2 and cell proliferation activity. Inhibition of miR-21-5p reduced high glucose-induced proliferation, migration, tube formation of HRMECs, and reversed the decreased expression of maspin as well as the abnormal activation of PI3K/AKT and ERK pathways. Down-regulation of maspin by siRNA significantly increased the activities of PI3K/AKT and ERK pathways. In conclusion, inhibition of miR-21-5p could suppress high glucose-induced proliferation and angiogenesis of HRMECs, and these effects may partly dependent on the regulation of PI3K/AKT and ERK pathways via its target protein maspin.     

A male sterility-associated cytotoxic protein ORF288 in Brassica juncea causes aborted pollen development

Cytoplasmic male sterility (CMS) is a widespread phenomenon in higher plants, and several studies have established that this maternally inherited defect is often associated with a mitochondrial mutant. Approximately 10 chimeric genes have been identified as being associated with corresponding CMS systems in the family Brassicaceae, but there is little direct evidence that these genes cause male sterility. In this study, a novel chimeric gene (named orf288) was found to be located downstream of the atp6 gene and co-transcribed with this gene in the hau CMS sterile line. Western blotting analysis showed that this predicted open reading frame (ORF) was translated in the mitochondria of male-sterile plants. Furthermore, the growth of Escherichia coli was significantly repressed in the presence of ORF288, which indicated that this protein is toxic to the E. coli host cells. To confirm further the function of orf288 in male sterility, the gene was fused to a mitochondrial-targeting pre-sequence under the control of the Arabidopsis APETALA3 promoter and introduced into Arabidopsis thaliana. Almost 80% of transgenic plants with orf288 failed to develop anthers. It was also found that the independent expression of orf288 caused male sterility in transgenic plants, even without the transit pre-sequence. Furthermore, transient expression of orf288 and green fluorescent protein (GFP) as a fused protein in A. thaliana protoplasts showed that ORF288 was able to anchor to mitochondria even without the external mitochondrial-targeting peptide. These observations provide important evidence that orf288 is responsible for the male sterility of hau CMS in Brassica juncea.     

Computational Design of a Protein-Based Enzyme Inhibitor

While there has been considerable progress in designing protein–protein interactions, the design of proteins that bind polar surfaces is an unmet challenge. We describe the computational design of a protein that binds the acidic active site of hen egg lysozyme and inhibits the enzyme. The design process starts with two polar amino acids that fit deep into the enzyme active site, identifies a protein scaffold that supports these residues and is complementary in shape to the lysozyme active-site region, and finally optimizes the surrounding contact surface for high-affinity binding. Following affinity maturation, a protein designed using this method bound lysozyme with low nanomolar affinity, and a combination of NMR studies, crystallography, and knockout mutagenesis confirmed the designed binding surface and orientation. Saturation mutagenesis with selection and deep sequencing demonstrated that specific designed interactions extending well beyond the centrally grafted polar residues are critical for high-affinity binding.